RNA–Protein interactions for RNA: ENST00000556631.1

KTN1-224, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 5,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-224ENST00000556631 RNF34Q969K3 372 aa2.21□□□□□ -2.06
KTN1-224ENST00000556631 PPP1R14AQ96A00 147 aa2.21□□□□□ -2.06
KTN1-224ENST00000556631 SIRT1Q96EB6 747 aa2.21□□□□□ -2.06
KTN1-224ENST00000556631 MYCBPQ99417 103 aaPredicted RBP2.21□□□□□ -2.06
KTN1-224ENST00000556631 BEGAINQ9BUH8 593 aa2.21□□□□□ -2.06
KTN1-224ENST00000556631 CALCOCO1Q9P1Z2 691 aa2.21□□□□□ -2.06
KTN1-224ENST00000556631 ANAPC4Q9UJX5 808 aa2.21□□□□□ -2.06
KTN1-224ENST00000556631 MKL2Q9ULH7 1088 aa2.21□□□□□ -2.06
KTN1-224ENST00000556631 TRIM17Q9Y577 477 aa2.21□□□□□ -2.06
KTN1-224ENST00000556631 CAND2O75155 1236 aa2.2□□□□□ -2.06
KTN1-224ENST00000556631 HNRNPUQ00839 825 aaKnown RBP eCLIP2.2□□□□□ -2.06
KTN1-224ENST00000556631 PSMD6Q15008 389 aa2.2□□□□□ -2.06
KTN1-224ENST00000556631 KRBA2Q6ZNG9 492 aa2.2□□□□□ -2.06
KTN1-224ENST00000556631 FTSJ3Q8IY81 847 aaKnown RBP2.2□□□□□ -2.06
KTN1-224ENST00000556631 CHCHD4Q8N4Q1 142 aa2.2□□□□□ -2.06
KTN1-224ENST00000556631 SRPK1Q96SB4 655 aaKnown RBP2.2□□□□□ -2.06
KTN1-224ENST00000556631 PAGR1Q9BTK6 254 aa2.2□□□□□ -2.06
KTN1-224ENST00000556631 USP25Q9UHP3 1055 aa2.2□□□□□ -2.06
KTN1-224ENST00000556631 RIPOR2Q9Y4F9 1068 aa2.2□□□□□ -2.06
KTN1-224ENST00000556631 ELL2O00472 640 aaPredicted RBP2.2□□□□□ -2.06
KTN1-224ENST00000556631 PRPF40AO75400 957 aaKnown RBP2.2□□□□□ -2.06
KTN1-224ENST00000556631 POLD1P28340 1107 aa2.2□□□□□ -2.06
KTN1-224ENST00000556631 CASQ1P31415 396 aa2.2□□□□□ -2.06
KTN1-224ENST00000556631 BLVRAP53004 296 aa2.2□□□□□ -2.06
KTN1-224ENST00000556631 PICALMQ13492 652 aa2.2□□□□□ -2.06
KTN1-224ENST00000556631 SMC1AQ14683 1233 aaKnown RBP2.2□□□□□ -2.06
KTN1-224ENST00000556631 PLCB4Q15147 1175 aa2.2□□□□□ -2.06
KTN1-224ENST00000556631 MCM8Q9UJA3 840 aa2.2□□□□□ -2.06
KTN1-224ENST00000556631 NOL7Q9UMY1 257 aaKnown RBP2.2□□□□□ -2.06
KTN1-224ENST00000556631 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP2.2□□□□□ -2.06
KTN1-224ENST00000556631 TRAPPC10P48553 1259 aa2.2□□□□□ -2.06
KTN1-224ENST00000556631 TPD52L1Q16890 204 aaPredicted RBP2.2□□□□□ -2.06
KTN1-224ENST00000556631 FAM161AQ3B820 660 aa2.2□□□□□ -2.06
KTN1-224ENST00000556631 SEPT14Q6ZU15 432 aa2.2□□□□□ -2.06
KTN1-224ENST00000556631 MYLK4Q86YV6 388 aaPredicted RBP2.2□□□□□ -2.06
KTN1-224ENST00000556631 ANKRD20A12PQ8NF67 263 aa2.2□□□□□ -2.06
KTN1-224ENST00000556631 SPDYE1Q8NFV5 336 aaPredicted RBP2.2□□□□□ -2.06
KTN1-224ENST00000556631 PNISRQ8TF01 805 aaKnown RBP2.2□□□□□ -2.06
KTN1-224ENST00000556631 SYAP1Q96A49 352 aaPredicted RBP2.2□□□□□ -2.06
KTN1-224ENST00000556631 UPF2Q9HAU5 1272 aaKnown RBP2.2□□□□□ -2.06
KTN1-224ENST00000556631 EVLQ9UI08 416 aaPredicted RBP2.2□□□□□ -2.06
KTN1-224ENST00000556631 RRP7AQ9Y3A4 280 aaKnown RBP2.2□□□□□ -2.06
KTN1-224ENST00000556631 LOC102724159A0A0B4J2E5 919 aa2.2□□□□□ -2.06
KTN1-224ENST00000556631 AGRPO00253 132 aa2.2□□□□□ -2.06
KTN1-224ENST00000556631 GNPATO15228 680 aa2.2□□□□□ -2.06
KTN1-224ENST00000556631 PWP2Q15269 919 aaKnown RBP2.2□□□□□ -2.06
KTN1-224ENST00000556631 JAKMIP3Q5VZ66 844 aa2.2□□□□□ -2.06
KTN1-224ENST00000556631 TEX19Q8NA77 164 aa2.2□□□□□ -2.06
KTN1-224ENST00000556631 BANK1Q8NDB2 785 aa2.2□□□□□ -2.06
KTN1-224ENST00000556631 UPF1Q92900 1129 aaKnown RBP eCLIP2.2□□□□□ -2.06
KTN1-224ENST00000556631 CCDC47Q96A33 483 aaKnown RBP2.2□□□□□ -2.06
KTN1-224ENST00000556631 IWS1Q96ST2 819 aa2.2□□□□□ -2.06
KTN1-224ENST00000556631 CENPHQ9H3R5 247 aa2.2□□□□□ -2.06
KTN1-224ENST00000556631 CABP2Q9NPB3 220 aa2.2□□□□□ -2.06
KTN1-224ENST00000556631 KDM6BO15054 1643 aa2.2□□□□□ -2.06
KTN1-224ENST00000556631 MAP3K7O43318 606 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 KIF5CO60282 957 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 RNF40O75150 1001 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 TBCAO75347 108 aaKnown RBP2.19□□□□□ -2.06
KTN1-224ENST00000556631 OFD1O75665 1012 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 MYL1P05976 194 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 SKIP12755 728 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 TERF1P54274 439 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 SKIDA1Q1XH10 827 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 RUBCNQ92622 972 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 CCDC102AQ96A19 550 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 HELLSQ9NRZ9 838 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 NDUFB9Q9Y6M9 179 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 H0YC42 278 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 IPO8O15397 1037 aaKnown RBP2.19□□□□□ -2.06
KTN1-224ENST00000556631 ZMYND10O75800 440 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 PMS1P54277 932 aaKnown RBP2.19□□□□□ -2.06
KTN1-224ENST00000556631 CCDC173Q0VFZ6 552 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 HIC1Q14526 733 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 CCDC73Q6ZRK6 1079 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 CPXCR1Q8N123 301 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 SMAD5Q99717 465 aaKnown RBP2.19□□□□□ -2.06
KTN1-224ENST00000556631 NOL10Q9BSC4 688 aaKnown RBP2.19□□□□□ -2.06
KTN1-224ENST00000556631 SWAP70Q9UH65 585 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 NOP58Q9Y2X3 529 aaKnown RBP2.19□□□□□ -2.06
KTN1-224ENST00000556631 TESPA1A2RU30 521 aaPredicted RBP2.19□□□□□ -2.06
KTN1-224ENST00000556631 RASA1P20936 1047 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 SOX11P35716 441 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 CLNS1AP54105 237 aaKnown RBP2.19□□□□□ -2.06
KTN1-224ENST00000556631 RNASE9P60153 205 aaKnown RBP2.19□□□□□ -2.06
KTN1-224ENST00000556631 SKOR1P84550 965 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 SF3B3Q15393 1217 aaKnown RBP2.19□□□□□ -2.06
KTN1-224ENST00000556631 SKIV2LQ15477 1246 aaKnown RBP2.19□□□□□ -2.06
KTN1-224ENST00000556631 SEPT7Q16181 437 aaKnown RBP2.19□□□□□ -2.06
KTN1-224ENST00000556631 DPH6Q7L8W6 267 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 FSD1Q9BTV5 496 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 JADE2Q9NQC1 790 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 NLRP2Q9NX02 1062 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 FBXO9Q9UK97 447 aaPredicted RBP2.19□□□□□ -2.06
KTN1-224ENST00000556631 SCAMP3O14828 347 aaKnown RBP2.19□□□□□ -2.06
KTN1-224ENST00000556631 FERP16591 822 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 XBP1P17861 261 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 ZBTB16Q05516 673 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 MAP2K5Q13163 448 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 DHX8Q14562 1220 aaKnown RBP2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms