RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 CADPS2Q86UW7 1296 aa23.4■■□□□ 1.34
SDR39U1-220ENST00000556548 IPO8O15397 1037 aaKnown RBP23.39■■□□□ 1.34
SDR39U1-220ENST00000556548 MS4A1P11836 297 aa23.39■■□□□ 1.34
SDR39U1-220ENST00000556548 ARHGEF25Q86VW2 580 aa23.39■■□□□ 1.34
SDR39U1-220ENST00000556548 TMEM57Q8N5G2 664 aa23.39■■□□□ 1.34
SDR39U1-220ENST00000556548 MRPL50Q8N5N7 158 aaKnown RBP23.39■■□□□ 1.34
SDR39U1-220ENST00000556548 ZC3H6P61129 1189 aaKnown RBP23.38■■□□□ 1.33
SDR39U1-220ENST00000556548 ZNF428Q96B54 188 aa23.38■■□□□ 1.33
SDR39U1-220ENST00000556548 CRB1P82279 1406 aa23.38■■□□□ 1.33
SDR39U1-220ENST00000556548 MSH6P52701 1360 aa23.38■■□□□ 1.33
SDR39U1-220ENST00000556548 ZNF335Q9H4Z2 1342 aaPredicted RBP23.37■■□□□ 1.33
SDR39U1-220ENST00000556548 TRPM3Q9HCF6 1732 aaPredicted RBP23.37■■□□□ 1.33
SDR39U1-220ENST00000556548 RGS3P49796 1198 aa23.37■■□□□ 1.33
SDR39U1-220ENST00000556548 KIF1AQ12756 1690 aa23.36■■□□□ 1.33
SDR39U1-220ENST00000556548 AXIN2Q9Y2T1 843 aa23.36■■□□□ 1.33
SDR39U1-220ENST00000556548 GNAT3A8MTJ3 354 aa23.36■■□□□ 1.33
SDR39U1-220ENST00000556548 USP19O94966 1318 aa23.35■■□□□ 1.33
SDR39U1-220ENST00000556548 TSPYL4Q9UJ04 414 aa23.35■■□□□ 1.33
SDR39U1-220ENST00000556548 DCCP43146 1447 aa23.35■■□□□ 1.33
SDR39U1-220ENST00000556548 CABLES1Q8TDN4 633 aa23.34■■□□□ 1.33
SDR39U1-220ENST00000556548 STRCQ7RTU9 1775 aa23.34■■□□□ 1.33
SDR39U1-220ENST00000556548 NCOA3Q9Y6Q9 1424 aa23.34■■□□□ 1.33
SDR39U1-220ENST00000556548 ANKRD24Q8TF21 1146 aa23.33■■□□□ 1.33
SDR39U1-220ENST00000556548 DDX19BQ9UMR2 479 aa23.33■■□□□ 1.33
SDR39U1-220ENST00000556548 SLIT3O75094 1523 aa23.33■■□□□ 1.33
SDR39U1-220ENST00000556548 BRPF1P55201 1214 aaPredicted RBP23.33■■□□□ 1.33
SDR39U1-220ENST00000556548 PDE4AP27815 886 aa23.32■■□□□ 1.32
SDR39U1-220ENST00000556548 AAMPQ13685 434 aa23.32■■□□□ 1.32
SDR39U1-220ENST00000556548 IL17REQ8NFR9 667 aa23.32■■□□□ 1.32
SDR39U1-220ENST00000556548 NPHP3Q7Z494 1330 aa23.31■■□□□ 1.32
SDR39U1-220ENST00000556548 ERICH6Q7L0X2 663 aa23.3■■□□□ 1.32
SDR39U1-220ENST00000556548 MAP3K5Q99683 1374 aa23.3■■□□□ 1.32
SDR39U1-220ENST00000556548 RGPD2P0DJD1 1756 aa23.29■■□□□ 1.32
SDR39U1-220ENST00000556548 HTATSF1O43719 755 aaKnown RBP23.28■■□□□ 1.32
SDR39U1-220ENST00000556548 MED1Q15648 1581 aaPredicted RBP23.28■■□□□ 1.32
SDR39U1-220ENST00000556548 BRINP3Q76B58 766 aa23.27■■□□□ 1.32
SDR39U1-220ENST00000556548 RWDD1Q9H446 243 aaPredicted RBP23.27■■□□□ 1.32
SDR39U1-220ENST00000556548 ARHGAP45Q92619 1136 aa23.27■■□□□ 1.32
SDR39U1-220ENST00000556548 ALS2Q96Q42 1657 aa23.26■■□□□ 1.31
SDR39U1-220ENST00000556548 XIRP1Q702N8 1843 aaKnown RBP23.26■■□□□ 1.31
SDR39U1-220ENST00000556548 BACH2Q9BYV9 841 aa23.26■■□□□ 1.31
SDR39U1-220ENST00000556548 KIAA0232Q92628 1395 aa23.26■■□□□ 1.31
SDR39U1-220ENST00000556548 ZBTB40Q9NUA8 1239 aa23.26■■□□□ 1.31
SDR39U1-220ENST00000556548 LGR6Q9HBX8 967 aa23.25■■□□□ 1.31
SDR39U1-220ENST00000556548 CHRNA2Q15822 529 aa23.25■■□□□ 1.31
SDR39U1-220ENST00000556548 PHRF1Q9P1Y6 1649 aaKnown RBP23.24■■□□□ 1.31
SDR39U1-220ENST00000556548 ZNF530Q6P9A1 599 aaPredicted RBP23.24■■□□□ 1.31
SDR39U1-220ENST00000556548 SLAIN2Q9P270 581 aa23.24■■□□□ 1.31
SDR39U1-220ENST00000556548 TNS3Q68CZ2 1445 aa23.23■■□□□ 1.31
SDR39U1-220ENST00000556548 SLC4A2P04920 1241 aa23.22■■□□□ 1.31
SDR39U1-220ENST00000556548 TAF7Q15545 349 aaPredicted RBP23.22■■□□□ 1.31
SDR39U1-220ENST00000556548 NECTIN2Q92692 538 aa23.22■■□□□ 1.31
SDR39U1-220ENST00000556548 C1orf115Q9H7X2 142 aa23.22■■□□□ 1.31
SDR39U1-220ENST00000556548 SPATA31A3Q5VYP0 1347 aa23.22■■□□□ 1.31
SDR39U1-220ENST00000556548 HAP1P54257 671 aaPredicted RBP23.22■■□□□ 1.31
SDR39U1-220ENST00000556548 API5Q9BZZ5 524 aaKnown RBP23.22■■□□□ 1.31
SDR39U1-220ENST00000556548 ABCC4O15439 1325 aa23.21■■□□□ 1.31
SDR39U1-220ENST00000556548 PLEKHO1Q53GL0 409 aaPredicted RBP23.21■■□□□ 1.31
SDR39U1-220ENST00000556548 NPM2Q86SE8 214 aaKnown RBP23.21■■□□□ 1.31
SDR39U1-220ENST00000556548 PXDNQ92626 1479 aa23.21■■□□□ 1.31
SDR39U1-220ENST00000556548 ERBB3P21860 1342 aa23.21■■□□□ 1.31
SDR39U1-220ENST00000556548 ZBTB7BO15156 539 aaPredicted RBP23.21■■□□□ 1.31
SDR39U1-220ENST00000556548 MPRIPQ6WCQ1 1025 aa23.21■■□□□ 1.31
SDR39U1-220ENST00000556548 PDZRN3Q9UPQ7 1066 aa23.21■■□□□ 1.31
SDR39U1-220ENST00000556548 NLRP2Q9NX02 1062 aa23.2■■□□□ 1.3
SDR39U1-220ENST00000556548 RGPD5Q99666 1765 aa23.19■■□□□ 1.3
SDR39U1-220ENST00000556548 MSH5O43196 834 aa23.18■■□□□ 1.3
SDR39U1-220ENST00000556548 CSB-PGBD3P0DP91 1061 aa23.17■■□□□ 1.3
SDR39U1-220ENST00000556548 G2E3Q7L622 706 aa23.17■■□□□ 1.3
SDR39U1-220ENST00000556548 LRRC37A3O60309 1634 aa23.17■■□□□ 1.3
SDR39U1-220ENST00000556548 AKAP4Q5JQC9 854 aa23.17■■□□□ 1.3
SDR39U1-220ENST00000556548 AMOTQ4VCS5 1084 aa23.16■■□□□ 1.3
SDR39U1-220ENST00000556548 C1orf141Q5JVX7 400 aa23.16■■□□□ 1.3
SDR39U1-220ENST00000556548 HDAC1Q13547 482 aaPredicted RBP23.16■■□□□ 1.3
SDR39U1-220ENST00000556548 CEMIPQ8WUJ3 1361 aa23.15■■□□□ 1.3
SDR39U1-220ENST00000556548 TEFQ10587 303 aa23.14■■□□□ 1.29
SDR39U1-220ENST00000556548 FAM161AQ3B820 660 aa23.14■■□□□ 1.29
SDR39U1-220ENST00000556548 C8orf34Q49A92 452 aa23.14■■□□□ 1.29
SDR39U1-220ENST00000556548 KCNQ3O43525 872 aa23.13■■□□□ 1.29
SDR39U1-220ENST00000556548 NCAPD2Q15021 1401 aa23.13■■□□□ 1.29
SDR39U1-220ENST00000556548 STK31Q9BXU1 1019 aa23.13■■□□□ 1.29
SDR39U1-220ENST00000556548 RGS12O14924 1447 aa23.12■■□□□ 1.29
SDR39U1-220ENST00000556548 F6X3S4 739 aa23.12■■□□□ 1.29
SDR39U1-220ENST00000556548 ANP32AP39687 249 aaKnown RBP23.12■■□□□ 1.29
SDR39U1-220ENST00000556548 RNMTO43148 476 aaKnown RBP23.11■■□□□ 1.29
SDR39U1-220ENST00000556548 RAPGEF4Q8WZA2 1011 aa23.11■■□□□ 1.29
SDR39U1-220ENST00000556548 PTPRCP08575 1304 aa23.11■■□□□ 1.29
SDR39U1-220ENST00000556548 SLC4A10Q6U841 1118 aa23.11■■□□□ 1.29
SDR39U1-220ENST00000556548 BTBD11A6QL63 1104 aa23.1■■□□□ 1.29
SDR39U1-220ENST00000556548 CCDC30Q5VVM6 783 aa23.1■■□□□ 1.29
SDR39U1-220ENST00000556548 CHMP4BQ9H444 224 aaKnown RBP23.1■■□□□ 1.29
SDR39U1-220ENST00000556548 BABAM1Q9NWV8 329 aa23.1■■□□□ 1.29
SDR39U1-220ENST00000556548 INTS3Q68E01 1043 aaKnown RBP23.1■■□□□ 1.29
SDR39U1-220ENST00000556548 SOS2Q07890 1332 aaPredicted RBP23.1■■□□□ 1.29
SDR39U1-220ENST00000556548 EIF2S2P20042 333 aaKnown RBP23.09■■□□□ 1.29
SDR39U1-220ENST00000556548 EIF4A1P60842 406 aaKnown RBP23.08■■□□□ 1.28
SDR39U1-220ENST00000556548 HDGFL1Q5TGJ6 251 aa23.07■■□□□ 1.28
SDR39U1-220ENST00000556548 SIRT2Q8IXJ6 389 aa23.07■■□□□ 1.28
SDR39U1-220ENST00000556548 SMC5Q8IY18 1101 aa23.07■■□□□ 1.28
SDR39U1-220ENST00000556548 PRDM11Q9NQV5 511 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms