RNA–Protein interactions for RNA: ENST00000556501.1

GPHN-213, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-213ENST00000556501 N4BP2Q86UW6 1770 aaPredicted RBP6.84□□□□□ -1.31
GPHN-213ENST00000556501 FAM208AQ9UK61 1670 aaKnown RBP6.84□□□□□ -1.32
GPHN-213ENST00000556501 KIF24Q5T7B8 1368 aa6.83□□□□□ -1.32
GPHN-213ENST00000556501 VAMP4O75379 141 aa6.83□□□□□ -1.32
GPHN-213ENST00000556501 SEC24BO95487 1268 aa6.83□□□□□ -1.32
GPHN-213ENST00000556501 RRS1Q15050 365 aaKnown RBP6.83□□□□□ -1.32
GPHN-213ENST00000556501 TBC1D32Q96NH3 1257 aa6.83□□□□□ -1.32
GPHN-213ENST00000556501 THUMPD2Q9BTF0 503 aaKnown RBP6.83□□□□□ -1.32
GPHN-213ENST00000556501 CHMP4BQ9H444 224 aaKnown RBP6.83□□□□□ -1.32
GPHN-213ENST00000556501 MBIPQ9NS73 344 aa6.83□□□□□ -1.32
GPHN-213ENST00000556501 ZBTB12Q9Y330 459 aaPredicted RBP6.83□□□□□ -1.32
GPHN-213ENST00000556501 TBX22Q9Y458 520 aa6.83□□□□□ -1.32
GPHN-213ENST00000556501 EID1Q9Y6B2 187 aa6.83□□□□□ -1.32
GPHN-213ENST00000556501 EIF4A2Q14240 407 aaKnown RBP6.82□□□□□ -1.32
GPHN-213ENST00000556501 UPF2Q9HAU5 1272 aaKnown RBP6.82□□□□□ -1.32
GPHN-213ENST00000556501 CHD2O14647 1828 aaKnown RBP6.82□□□□□ -1.32
GPHN-213ENST00000556501 RGS12O14924 1447 aa6.82□□□□□ -1.32
GPHN-213ENST00000556501 SBNO1A3KN83 1393 aa6.82□□□□□ -1.32
GPHN-213ENST00000556501 FLT4P35916 1363 aa6.82□□□□□ -1.32
GPHN-213ENST00000556501 KIAA0232Q92628 1395 aa6.82□□□□□ -1.32
GPHN-213ENST00000556501 SLC4A3P48751 1232 aa6.81□□□□□ -1.32
GPHN-213ENST00000556501 NUCB1Q02818 461 aa6.81□□□□□ -1.32
GPHN-213ENST00000556501 BECN1Q14457 450 aa6.81□□□□□ -1.32
GPHN-213ENST00000556501 TWISTNBQ3B726 338 aaPredicted RBP6.81□□□□□ -1.32
GPHN-213ENST00000556501 PLCD3Q8N3E9 789 aa6.81□□□□□ -1.32
GPHN-213ENST00000556501 TSPYL6Q8N831 410 aa6.81□□□□□ -1.32
GPHN-213ENST00000556501 API5Q9BZZ5 524 aaKnown RBP6.81□□□□□ -1.32
GPHN-213ENST00000556501 BCL11AQ9H165 835 aa6.81□□□□□ -1.32
GPHN-213ENST00000556501 CRB1P82279 1406 aa6.81□□□□□ -1.32
GPHN-213ENST00000556501 NWD1Q149M9 1564 aa6.81□□□□□ -1.32
GPHN-213ENST00000556501 KDRP35968 1356 aa6.81□□□□□ -1.32
GPHN-213ENST00000556501 PHRF1Q9P1Y6 1649 aaKnown RBP6.8□□□□□ -1.32
GPHN-213ENST00000556501 NFKBIBQ15653 356 aa6.8□□□□□ -1.32
GPHN-213ENST00000556501 AEBP1Q8IUX7 1158 aa6.8□□□□□ -1.32
GPHN-213ENST00000556501 SLC26A8Q96RN1 970 aa6.8□□□□□ -1.32
GPHN-213ENST00000556501 AMOTL2Q9Y2J4 779 aa6.8□□□□□ -1.32
GPHN-213ENST00000556501 LTN1O94822 1766 aa6.8□□□□□ -1.32
GPHN-213ENST00000556501 MAP3K19Q56UN5 1328 aa6.79□□□□□ -1.32
GPHN-213ENST00000556501 ATP10DQ9P241 1426 aa6.79□□□□□ -1.32
GPHN-213ENST00000556501 FAM83GA6ND36 823 aa6.79□□□□□ -1.32
GPHN-213ENST00000556501 CHL1O00533 1208 aa6.79□□□□□ -1.32
GPHN-213ENST00000556501 ZBTB7BO15156 539 aaPredicted RBP6.79□□□□□ -1.32
GPHN-213ENST00000556501 CEBPAP49715 358 aaPredicted RBP6.79□□□□□ -1.32
GPHN-213ENST00000556501 SULT6B1Q6IMI4 303 aa6.79□□□□□ -1.32
GPHN-213ENST00000556501 THEMISQ8N1K5 641 aaPredicted RBP6.79□□□□□ -1.32
GPHN-213ENST00000556501 C8orf58Q8NAV2 365 aa6.79□□□□□ -1.32
GPHN-213ENST00000556501 GCC1Q96CN9 775 aa6.79□□□□□ -1.32
GPHN-213ENST00000556501 RTL1A6NKG5 1358 aa6.79□□□□□ -1.32
GPHN-213ENST00000556501 IGSF1Q8N6C5 1336 aa6.78□□□□□ -1.32
GPHN-213ENST00000556501 NFAT5O94916 1531 aa6.78□□□□□ -1.32
GPHN-213ENST00000556501 CHD1LQ86WJ1 897 aa6.78□□□□□ -1.32
GPHN-213ENST00000556501 CACNA1FO60840 1977 aa6.78□□□□□ -1.32
GPHN-213ENST00000556501 MED1Q15648 1581 aaPredicted RBP6.78□□□□□ -1.32
GPHN-213ENST00000556501 ADAMTSL3P82987 1691 aa6.77□□□□□ -1.32
GPHN-213ENST00000556501 DCTN1Q14203 1278 aa6.77□□□□□ -1.33
GPHN-213ENST00000556501 HSP90AB2PQ58FF8 381 aa6.77□□□□□ -1.33
GPHN-213ENST00000556501 BMP2KLQ5H9B9 411 aa6.77□□□□□ -1.33
GPHN-213ENST00000556501 INTS3Q68E01 1043 aaKnown RBP6.77□□□□□ -1.33
GPHN-213ENST00000556501 ANTXR1Q9H6X2 564 aa6.77□□□□□ -1.33
GPHN-213ENST00000556501 MSH6P52701 1360 aa6.77□□□□□ -1.33
GPHN-213ENST00000556501 LMO7Q8WWI1 1683 aa6.77□□□□□ -1.33
GPHN-213ENST00000556501 PTPRCP08575 1304 aa6.76□□□□□ -1.33
GPHN-213ENST00000556501 ADGRL3Q9HAR2 1447 aa6.76□□□□□ -1.33
GPHN-213ENST00000556501 NCOA3Q9Y6Q9 1424 aa6.76□□□□□ -1.33
GPHN-213ENST00000556501 NUTM2FA1L443 756 aa6.76□□□□□ -1.33
GPHN-213ENST00000556501 ELL2O00472 640 aaPredicted RBP6.76□□□□□ -1.33
GPHN-213ENST00000556501 MFAP1P55081 439 aaKnown RBP6.76□□□□□ -1.33
GPHN-213ENST00000556501 SIRT2Q8IXJ6 389 aa6.76□□□□□ -1.33
GPHN-213ENST00000556501 NGDNQ8NEJ9 315 aaKnown RBP6.76□□□□□ -1.33
GPHN-213ENST00000556501 TBC1D2Q9BYX2 928 aa6.76□□□□□ -1.33
GPHN-213ENST00000556501 C22orf23Q9BZE7 217 aa6.76□□□□□ -1.33
GPHN-213ENST00000556501 LNPKQ9C0E8 428 aa6.76□□□□□ -1.33
GPHN-213ENST00000556501 C1orf115Q9H7X2 142 aa6.76□□□□□ -1.33
GPHN-213ENST00000556501 CAMTA1Q9Y6Y1 1673 aa6.76□□□□□ -1.33
GPHN-213ENST00000556501 KDM3BQ7LBC6 1761 aa6.76□□□□□ -1.33
GPHN-213ENST00000556501 TUBGCP6Q96RT7 1819 aa6.76□□□□□ -1.33
GPHN-213ENST00000556501 PXDNLA1KZ92 1463 aa6.75□□□□□ -1.33
GPHN-213ENST00000556501 HTATSF1O43719 755 aaKnown RBP6.75□□□□□ -1.33
GPHN-213ENST00000556501 FRAT2O75474 233 aaPredicted RBP6.75□□□□□ -1.33
GPHN-213ENST00000556501 RBM25P49756 843 aaKnown RBP6.75□□□□□ -1.33
GPHN-213ENST00000556501 MCM10Q7L590 875 aa6.75□□□□□ -1.33
GPHN-213ENST00000556501 GAS2L2Q8NHY3 880 aa6.75□□□□□ -1.33
GPHN-213ENST00000556501 CIZ1Q9ULV3 898 aaPredicted RBP6.75□□□□□ -1.33
GPHN-213ENST00000556501 SLIT3O75094 1523 aa6.75□□□□□ -1.33
GPHN-213ENST00000556501 SOS1Q07889 1333 aaPredicted RBP6.75□□□□□ -1.33
GPHN-213ENST00000556501 MAP3K5Q99683 1374 aa6.74□□□□□ -1.33
GPHN-213ENST00000556501 TRPM3Q9HCF6 1732 aaPredicted RBP6.74□□□□□ -1.33
GPHN-213ENST00000556501 KCNA6P17658 529 aa6.74□□□□□ -1.33
GPHN-213ENST00000556501 AMPHP49418 695 aa6.74□□□□□ -1.33
GPHN-213ENST00000556501 GSE1Q14687 1217 aa6.74□□□□□ -1.33
GPHN-213ENST00000556501 MTHFSDQ2M296 383 aaKnown RBP6.74□□□□□ -1.33
GPHN-213ENST00000556501 KRT24Q2M2I5 525 aa6.74□□□□□ -1.33
GPHN-213ENST00000556501 ANKRD45Q5TZF3 282 aa6.74□□□□□ -1.33
GPHN-213ENST00000556501 ANKRD44Q8N8A2 993 aa6.74□□□□□ -1.33
GPHN-213ENST00000556501 EYA1Q99502 592 aa6.74□□□□□ -1.33
GPHN-213ENST00000556501 RBM42Q9BTD8 480 aaKnown RBP6.74□□□□□ -1.33
GPHN-213ENST00000556501 KIF1AQ12756 1690 aa6.74□□□□□ -1.33
GPHN-213ENST00000556501 TULP1O00294 542 aaPredicted RBP6.73□□□□□ -1.33
GPHN-213ENST00000556501 SOX12O15370 315 aa6.73□□□□□ -1.33
GPHN-213ENST00000556501 CDC45O75419 566 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms