RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 DNTTIP2Q5QJE6 756 aaKnown RBP6.43□□□□□ -1.38
TMEM260-210ENST00000556422 CENPQQ7L2Z9 268 aaPredicted RBP6.43□□□□□ -1.38
TMEM260-210ENST00000556422 BCL2L13Q9BXK5 485 aa6.43□□□□□ -1.38
TMEM260-210ENST00000556422 PHACTR3Q96KR7 559 aa6.42□□□□□ -1.38
TMEM260-210ENST00000556422 USP54Q70EL1 1684 aa6.42□□□□□ -1.38
TMEM260-210ENST00000556422 ACEP12821 1306 aa6.42□□□□□ -1.38
TMEM260-210ENST00000556422 PLEKHG3A1L390 1219 aa6.42□□□□□ -1.38
TMEM260-210ENST00000556422 MS4A1P11836 297 aa6.42□□□□□ -1.38
TMEM260-210ENST00000556422 PRKAR2BP31323 418 aa6.42□□□□□ -1.38
TMEM260-210ENST00000556422 CALD1Q05682 793 aaKnown RBP6.42□□□□□ -1.38
TMEM260-210ENST00000556422 RRS1Q15050 365 aaKnown RBP6.42□□□□□ -1.38
TMEM260-210ENST00000556422 BACH2Q9BYV9 841 aa6.42□□□□□ -1.38
TMEM260-210ENST00000556422 MYH16Q9H6N6 1097 aa6.42□□□□□ -1.38
TMEM260-210ENST00000556422 AMOTL2Q9Y2J4 779 aa6.42□□□□□ -1.38
TMEM260-210ENST00000556422 TBX22Q9Y458 520 aa6.42□□□□□ -1.38
TMEM260-210ENST00000556422 MAPK8IP3Q9UPT6 1336 aa6.42□□□□□ -1.38
TMEM260-210ENST00000556422 RIPK4P57078 832 aa6.42□□□□□ -1.38
TMEM260-210ENST00000556422 COG6Q9Y2V7 657 aa6.42□□□□□ -1.38
TMEM260-210ENST00000556422 IL16Q14005 1332 aa6.41□□□□□ -1.38
TMEM260-210ENST00000556422 NUTM2FA1L443 756 aa6.41□□□□□ -1.38
TMEM260-210ENST00000556422 PHF14O94880 888 aa6.41□□□□□ -1.38
TMEM260-210ENST00000556422 IGHDP01880 384 aa6.41□□□□□ -1.38
TMEM260-210ENST00000556422 PDE4AP27815 886 aa6.41□□□□□ -1.38
TMEM260-210ENST00000556422 TTC21BQ7Z4L5 1316 aa6.41□□□□□ -1.38
TMEM260-210ENST00000556422 HMOX1P09601 288 aa6.41□□□□□ -1.38
TMEM260-210ENST00000556422 EXOSC9Q06265 439 aaKnown RBP6.41□□□□□ -1.38
TMEM260-210ENST00000556422 COG3Q96JB2 828 aa6.41□□□□□ -1.38
TMEM260-210ENST00000556422 ZNF830Q96NB3 372 aaPredicted RBP6.41□□□□□ -1.38
TMEM260-210ENST00000556422 EID1Q9Y6B2 187 aa6.41□□□□□ -1.38
TMEM260-210ENST00000556422 USP31Q70CQ4 1352 aa6.41□□□□□ -1.38
TMEM260-210ENST00000556422 FRAT1Q92837 279 aaPredicted RBP6.41□□□□□ -1.38
TMEM260-210ENST00000556422 CLUAP1Q96AJ1 413 aa6.41□□□□□ -1.38
TMEM260-210ENST00000556422 RGS22Q8NE09 1264 aa6.4□□□□□ -1.38
TMEM260-210ENST00000556422 SETD1BQ9UPS6 1966 aaKnown RBP6.4□□□□□ -1.38
TMEM260-210ENST00000556422 MYCNP04198 464 aaPredicted RBP6.4□□□□□ -1.38
TMEM260-210ENST00000556422 CT47B1P0C2W7 299 aaPredicted RBP6.4□□□□□ -1.38
TMEM260-210ENST00000556422 THEMISQ8N1K5 641 aaPredicted RBP6.4□□□□□ -1.38
TMEM260-210ENST00000556422 CC2D2BQ6DHV5 1058 aa6.39□□□□□ -1.39
TMEM260-210ENST00000556422 SSH1Q8WYL5 1049 aa6.39□□□□□ -1.39
TMEM260-210ENST00000556422 NFE2L2Q16236 605 aa6.39□□□□□ -1.39
TMEM260-210ENST00000556422 AXDND1Q5T1B0 1012 aaPredicted RBP6.39□□□□□ -1.39
TMEM260-210ENST00000556422 MTMR7Q9Y216 660 aa6.39□□□□□ -1.39
TMEM260-210ENST00000556422 PCDHB15Q9Y5E8 787 aa6.39□□□□□ -1.39
TMEM260-210ENST00000556422 KCNA6P17658 529 aa6.39□□□□□ -1.39
TMEM260-210ENST00000556422 THUMPD2Q9BTF0 503 aaKnown RBP6.39□□□□□ -1.39
TMEM260-210ENST00000556422 PNNQ9H307 717 aaKnown RBP6.39□□□□□ -1.39
TMEM260-210ENST00000556422 PAK3O75914 559 aaPredicted RBP6.38□□□□□ -1.39
TMEM260-210ENST00000556422 TRIM27P14373 513 aa6.38□□□□□ -1.39
TMEM260-210ENST00000556422 C8orf34Q49A92 452 aa6.38□□□□□ -1.39
TMEM260-210ENST00000556422 PIK3R4Q99570 1358 aa6.38□□□□□ -1.39
TMEM260-210ENST00000556422 EIF4A2Q14240 407 aaKnown RBP6.38□□□□□ -1.39
TMEM260-210ENST00000556422 AEBP1Q8IUX7 1158 aa6.38□□□□□ -1.39
TMEM260-210ENST00000556422 ANKARQ7Z5J8 1434 aa6.38□□□□□ -1.39
TMEM260-210ENST00000556422 LTN1O94822 1766 aa6.38□□□□□ -1.39
TMEM260-210ENST00000556422 ZNF853P0CG23 659 aa6.38□□□□□ -1.39
TMEM260-210ENST00000556422 PMFBP1Q8TBY8 1022 aa6.38□□□□□ -1.39
TMEM260-210ENST00000556422 MVPQ14764 893 aaKnown RBP6.37□□□□□ -1.39
TMEM260-210ENST00000556422 FBXO41Q8TF61 875 aa6.37□□□□□ -1.39
TMEM260-210ENST00000556422 FOXD4L6Q3SYB3 417 aaPredicted RBP6.37□□□□□ -1.39
TMEM260-210ENST00000556422 HSP90AB2PQ58FF8 381 aa6.37□□□□□ -1.39
TMEM260-210ENST00000556422 ZKSCAN2Q63HK3 967 aa6.37□□□□□ -1.39
TMEM260-210ENST00000556422 FOXD4L3Q6VB84 417 aaPredicted RBP6.37□□□□□ -1.39
TMEM260-210ENST00000556422 IPO9Q96P70 1041 aaKnown RBP6.37□□□□□ -1.39
TMEM260-210ENST00000556422 SMC4Q9NTJ3 1288 aa6.37□□□□□ -1.39
TMEM260-210ENST00000556422 NWD1Q149M9 1564 aa6.37□□□□□ -1.39
TMEM260-210ENST00000556422 FAM83GA6ND36 823 aa6.37□□□□□ -1.39
TMEM260-210ENST00000556422 NOP58Q9Y2X3 529 aaKnown RBP6.37□□□□□ -1.39
TMEM260-210ENST00000556422 TTC21AQ8NDW8 1320 aa6.36□□□□□ -1.39
TMEM260-210ENST00000556422 TSPYL6Q8N831 410 aa6.36□□□□□ -1.39
TMEM260-210ENST00000556422 LRRC37A3O60309 1634 aa6.36□□□□□ -1.39
TMEM260-210ENST00000556422 MAP3K19Q56UN5 1328 aa6.36□□□□□ -1.39
TMEM260-210ENST00000556422 ANP32AP39687 249 aaKnown RBP6.36□□□□□ -1.39
TMEM260-210ENST00000556422 ATF7IPQ6VMQ6 1270 aa6.36□□□□□ -1.39
TMEM260-210ENST00000556422 DZIP1LQ8IYY4 767 aaKnown RBP6.36□□□□□ -1.39
TMEM260-210ENST00000556422 MBIPQ9NS73 344 aa6.36□□□□□ -1.39
TMEM260-210ENST00000556422 BRPF1P55201 1214 aaPredicted RBP6.36□□□□□ -1.39
TMEM260-210ENST00000556422 NOB1Q9ULX3 412 aaKnown RBP6.36□□□□□ -1.39
TMEM260-210ENST00000556422 KDRP35968 1356 aa6.36□□□□□ -1.39
TMEM260-210ENST00000556422 VAMP4O75379 141 aa6.35□□□□□ -1.39
TMEM260-210ENST00000556422 ALDH1L2Q3SY69 923 aa6.35□□□□□ -1.39
TMEM260-210ENST00000556422 IFT57Q9NWB7 429 aa6.35□□□□□ -1.39
TMEM260-210ENST00000556422 DCTN1Q14203 1278 aa6.35□□□□□ -1.39
TMEM260-210ENST00000556422 SULT6B1Q6IMI4 303 aa6.35□□□□□ -1.39
TMEM260-210ENST00000556422 FAM161AQ3B820 660 aa6.35□□□□□ -1.39
TMEM260-210ENST00000556422 PRDM4Q9UKN5 801 aa6.35□□□□□ -1.39
TMEM260-210ENST00000556422 LAS1LQ9Y4W2 734 aaKnown RBP6.35□□□□□ -1.39
TMEM260-210ENST00000556422 SBNO1A3KN83 1393 aa6.35□□□□□ -1.39
TMEM260-210ENST00000556422 FLT4P35916 1363 aa6.35□□□□□ -1.39
TMEM260-210ENST00000556422 RGPD2P0DJD1 1756 aa6.35□□□□□ -1.39
TMEM260-210ENST00000556422 KIF16BQ96L93 1317 aa6.34□□□□□ -1.39
TMEM260-210ENST00000556422 TMEM57Q8N5G2 664 aa6.34□□□□□ -1.39
TMEM260-210ENST00000556422 ZHX1Q9UKY1 873 aaPredicted RBP6.34□□□□□ -1.39
TMEM260-210ENST00000556422 PHRF1Q9P1Y6 1649 aaKnown RBP6.34□□□□□ -1.39
TMEM260-210ENST00000556422 NFAT5O94916 1531 aa6.34□□□□□ -1.39
TMEM260-210ENST00000556422 FAM43AQ8N2R8 423 aa6.34□□□□□ -1.39
TMEM260-210ENST00000556422 ARHGEF10O15013 1369 aa6.34□□□□□ -1.39
TMEM260-210ENST00000556422 GNAI1P63096 354 aa6.34□□□□□ -1.39
TMEM260-210ENST00000556422 MPNDQ8N594 471 aa6.34□□□□□ -1.39
TMEM260-210ENST00000556422 C8orf58Q8NAV2 365 aa6.34□□□□□ -1.39
TMEM260-210ENST00000556422 NGDNQ8NEJ9 315 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms