RNA–Protein interactions for RNA: ENST00000556272.1

PCNX1-211, Transcript of pecanex 1, humanhuman

TSL 2

Gene PCNX1, Length 2,942 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-211ENST00000556272 ANAPC15P60006 121 aa9.34□□□□□ -0.91
PCNX1-211ENST00000556272 UBXN4Q92575 508 aa9.34□□□□□ -0.91
PCNX1-211ENST00000556272 PLCD4Q9BRC7 762 aa9.34□□□□□ -0.91
PCNX1-211ENST00000556272 MYH16Q9H6N6 1097 aa9.34□□□□□ -0.91
PCNX1-211ENST00000556272 SPINK5Q9NQ38 1064 aaPredicted RBP9.34□□□□□ -0.91
PCNX1-211ENST00000556272 ABCC11Q96J66 1382 aa9.33□□□□□ -0.92
PCNX1-211ENST00000556272 TSR1Q2NL82 804 aaKnown RBP9.33□□□□□ -0.92
PCNX1-211ENST00000556272 GPATCH3Q96I76 525 aa9.33□□□□□ -0.92
PCNX1-211ENST00000556272 CDC42BPGQ6DT37 1551 aa9.33□□□□□ -0.92
PCNX1-211ENST00000556272 PROCA1Q8NCQ7 364 aaPredicted RBP9.33□□□□□ -0.92
PCNX1-211ENST00000556272 REPIN1Q9BWE0 567 aaKnown RBP9.33□□□□□ -0.92
PCNX1-211ENST00000556272 ATAD2Q6PL18 1390 aa9.32□□□□□ -0.92
PCNX1-211ENST00000556272 GGT6Q6P531 493 aa9.32□□□□□ -0.92
PCNX1-211ENST00000556272 KIF20BQ96Q89 1820 aa9.32□□□□□ -0.92
PCNX1-211ENST00000556272 MAFGO15525 162 aa9.32□□□□□ -0.92
PCNX1-211ENST00000556272 NEFMP07197 916 aa9.32□□□□□ -0.92
PCNX1-211ENST00000556272 CDCA7Q9BWT1 371 aaPredicted RBP9.32□□□□□ -0.92
PCNX1-211ENST00000556272 AGLP35573 1532 aa9.32□□□□□ -0.92
PCNX1-211ENST00000556272 COL3A1P02461 1466 aaPredicted RBP9.31□□□□□ -0.92
PCNX1-211ENST00000556272 BCAR3O75815 825 aa9.31□□□□□ -0.92
PCNX1-211ENST00000556272 RARSP54136 660 aaKnown RBP9.31□□□□□ -0.92
PCNX1-211ENST00000556272 DLC1Q96QB1 1528 aa9.31□□□□□ -0.92
PCNX1-211ENST00000556272 PTPRMP28827 1452 aa9.31□□□□□ -0.92
PCNX1-211ENST00000556272 TRAK1Q9UPV9 953 aa9.31□□□□□ -0.92
PCNX1-211ENST00000556272 IL16Q14005 1332 aa9.3□□□□□ -0.92
PCNX1-211ENST00000556272 MINK1Q8N4C8 1332 aaPredicted RBP9.3□□□□□ -0.92
PCNX1-211ENST00000556272 CFAP65Q6ZU64 1925 aaKnown RBP9.3□□□□□ -0.92
PCNX1-211ENST00000556272 IRF6O14896 467 aa9.3□□□□□ -0.92
PCNX1-211ENST00000556272 TTLL12Q14166 644 aaPredicted RBP9.3□□□□□ -0.92
PCNX1-211ENST00000556272 TCP11L2Q8N4U5 519 aa9.3□□□□□ -0.92
PCNX1-211ENST00000556272 CSB-PGBD3P0DP91 1061 aa9.3□□□□□ -0.92
PCNX1-211ENST00000556272 CNPY4Q8N129 248 aa9.3□□□□□ -0.92
PCNX1-211ENST00000556272 VTI1AQ96AJ9 217 aa9.3□□□□□ -0.92
PCNX1-211ENST00000556272 MYO5BQ9ULV0 1848 aa9.29□□□□□ -0.92
PCNX1-211ENST00000556272 HSP90AB4PQ58FF6 505 aa9.29□□□□□ -0.92
PCNX1-211ENST00000556272 SH3D19Q5HYK7 790 aa9.29□□□□□ -0.92
PCNX1-211ENST00000556272 SLC12A5Q9H2X9 1139 aa9.29□□□□□ -0.92
PCNX1-211ENST00000556272 GDPD2Q9HCC8 539 aa9.29□□□□□ -0.92
PCNX1-211ENST00000556272 KLHL42Q9P2K6 505 aa9.29□□□□□ -0.92
PCNX1-211ENST00000556272 TMEM88BA6NKF7 163 aa9.28□□□□□ -0.92
PCNX1-211ENST00000556272 FOXD4L6Q3SYB3 417 aaPredicted RBP9.28□□□□□ -0.92
PCNX1-211ENST00000556272 NAALADL2Q58DX5 795 aa9.28□□□□□ -0.92
PCNX1-211ENST00000556272 FBXO31Q5XUX0 539 aaPredicted RBP9.28□□□□□ -0.92
PCNX1-211ENST00000556272 FOXD4L3Q6VB84 417 aaPredicted RBP9.28□□□□□ -0.92
PCNX1-211ENST00000556272 GIGYF2Q6Y7W6 1299 aaKnown RBP9.28□□□□□ -0.92
PCNX1-211ENST00000556272 EVI5LQ96CN4 794 aa9.28□□□□□ -0.92
PCNX1-211ENST00000556272 LARP6Q9BRS8 491 aaKnown RBP9.28□□□□□ -0.92
PCNX1-211ENST00000556272 PNNQ9H307 717 aaKnown RBP9.28□□□□□ -0.92
PCNX1-211ENST00000556272 NLRP1Q9C000 1473 aa9.28□□□□□ -0.92
PCNX1-211ENST00000556272 SPDYE2BA6NHP3 402 aa9.28□□□□□ -0.92
PCNX1-211ENST00000556272 SPDYE5A6NIY4 337 aa9.28□□□□□ -0.92
PCNX1-211ENST00000556272 SPDYE6P0CI01 402 aa9.28□□□□□ -0.92
PCNX1-211ENST00000556272 MTHFSP49914 203 aa9.28□□□□□ -0.92
PCNX1-211ENST00000556272 MAP2K5Q13163 448 aa9.28□□□□□ -0.92
PCNX1-211ENST00000556272 SPDYE2Q495Y8 402 aa9.28□□□□□ -0.92
PCNX1-211ENST00000556272 DPH6Q7L8W6 267 aa9.28□□□□□ -0.92
PCNX1-211ENST00000556272 RBM46Q8TBY0 533 aaKnown RBP9.28□□□□□ -0.92
PCNX1-211ENST00000556272 DCAF8L1A6NGE4 600 aa9.28□□□□□ -0.92
PCNX1-211ENST00000556272 FECHP22830 423 aa9.28□□□□□ -0.92
PCNX1-211ENST00000556272 SETQ01105 290 aaPredicted RBP9.28□□□□□ -0.92
PCNX1-211ENST00000556272 LAS1LQ9Y4W2 734 aaKnown RBP9.28□□□□□ -0.92
PCNX1-211ENST00000556272 ZC3H6P61129 1189 aaKnown RBP9.27□□□□□ -0.93
PCNX1-211ENST00000556272 A0A1W2PP64 1363 aa9.27□□□□□ -0.93
PCNX1-211ENST00000556272 PNPLA6Q8IY17 1366 aa9.27□□□□□ -0.93
PCNX1-211ENST00000556272 PEX14O75381 377 aa9.27□□□□□ -0.93
PCNX1-211ENST00000556272 MAP4K4O95819 1239 aaPredicted RBP9.27□□□□□ -0.93
PCNX1-211ENST00000556272 IGHDP01880 384 aa9.27□□□□□ -0.93
PCNX1-211ENST00000556272 CHRM1P11229 460 aaPredicted RBP9.27□□□□□ -0.93
PCNX1-211ENST00000556272 VRTNQ9H8Y1 702 aa9.27□□□□□ -0.93
PCNX1-211ENST00000556272 ATP7BP35670 1465 aa9.27□□□□□ -0.93
PCNX1-211ENST00000556272 RWDD1Q9H446 243 aaPredicted RBP9.26□□□□□ -0.93
PCNX1-211ENST00000556272 CD163L1Q9NR16 1453 aa9.26□□□□□ -0.93
PCNX1-211ENST00000556272 YTHDC2Q9H6S0 1430 aaKnown RBP9.26□□□□□ -0.93
PCNX1-211ENST00000556272 BECN1Q14457 450 aa9.26□□□□□ -0.93
PCNX1-211ENST00000556272 TERF2IPQ9NYB0 399 aa9.26□□□□□ -0.93
PCNX1-211ENST00000556272 ALKQ9UM73 1620 aa9.26□□□□□ -0.93
PCNX1-211ENST00000556272 SETD1AO15047 1707 aaKnown RBP9.26□□□□□ -0.93
PCNX1-211ENST00000556272 RGS3P49796 1198 aa9.25□□□□□ -0.93
PCNX1-211ENST00000556272 NFKBIBQ15653 356 aa9.25□□□□□ -0.93
PCNX1-211ENST00000556272 GORABQ5T7V8 394 aa9.25□□□□□ -0.93
PCNX1-211ENST00000556272 APBB1IPQ7Z5R6 666 aaPredicted RBP9.25□□□□□ -0.93
PCNX1-211ENST00000556272 PPIP5K1Q6PFW1 1433 aa9.25□□□□□ -0.93
PCNX1-211ENST00000556272 PYGBP11216 843 aa9.25□□□□□ -0.93
PCNX1-211ENST00000556272 MVPQ14764 893 aaKnown RBP9.25□□□□□ -0.93
PCNX1-211ENST00000556272 TMEM132EQ6IEE7 984 aa9.25□□□□□ -0.93
PCNX1-211ENST00000556272 ADAMTS19Q8TE59 1207 aa9.25□□□□□ -0.93
PCNX1-211ENST00000556272 GIPC2Q8TF65 315 aa9.25□□□□□ -0.93
PCNX1-211ENST00000556272 MLECQ14165 292 aa9.25□□□□□ -0.93
PCNX1-211ENST00000556272 ZKSCAN2Q63HK3 967 aa9.25□□□□□ -0.93
PCNX1-211ENST00000556272 SKAP1Q86WV1 359 aa9.25□□□□□ -0.93
PCNX1-211ENST00000556272 TMTC2Q8N394 836 aa9.25□□□□□ -0.93
PCNX1-211ENST00000556272 PLEKHF1Q96S99 279 aa9.25□□□□□ -0.93
PCNX1-211ENST00000556272 UPF2Q9HAU5 1272 aaKnown RBP9.25□□□□□ -0.93
PCNX1-211ENST00000556272 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.25□□□□□ -0.93
PCNX1-211ENST00000556272 USP19O94966 1318 aa9.24□□□□□ -0.93
PCNX1-211ENST00000556272 SPATA31D1Q6ZQQ2 1576 aa9.24□□□□□ -0.93
PCNX1-211ENST00000556272 SPTY2D1Q68D10 685 aaPredicted RBP9.24□□□□□ -0.93
PCNX1-211ENST00000556272 PANK1Q8TE04 598 aa9.24□□□□□ -0.93
PCNX1-211ENST00000556272 BCL2L13Q9BXK5 485 aa9.24□□□□□ -0.93
PCNX1-211ENST00000556272 GNEQ9Y223 722 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms