RNA–Protein interactions for RNA: ENST00000555832.1

XRCC3-214, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-214ENST00000555832 PCDH11XQ9BZA7 1347 aa23.09■■□□□ 1.29
XRCC3-214ENST00000555832 PCDH11YQ9BZA8 1340 aa23.09■■□□□ 1.29
XRCC3-214ENST00000555832 BCL11BQ9C0K0 894 aaPredicted RBP23.07■■□□□ 1.28
XRCC3-214ENST00000555832 NCAPD2Q15021 1401 aa23.07■■□□□ 1.28
XRCC3-214ENST00000555832 APBA3O96018 575 aa23.06■■□□□ 1.28
XRCC3-214ENST00000555832 PPP2R1AP30153 589 aa23.06■■□□□ 1.28
XRCC3-214ENST00000555832 IL13P35225 146 aa23.06■■□□□ 1.28
XRCC3-214ENST00000555832 AMOTQ4VCS5 1084 aa23.06■■□□□ 1.28
XRCC3-214ENST00000555832 MEGF6O75095 1541 aa23.05■■□□□ 1.28
XRCC3-214ENST00000555832 PLEKHO1Q53GL0 409 aaPredicted RBP23.05■■□□□ 1.28
XRCC3-214ENST00000555832 RGPD1P0DJD0 1748 aa23.04■■□□□ 1.28
XRCC3-214ENST00000555832 PARD3Q8TEW0 1356 aa23.03■■□□□ 1.28
XRCC3-214ENST00000555832 SULT6B1Q6IMI4 303 aa23.03■■□□□ 1.28
XRCC3-214ENST00000555832 U2SURPO15042 1029 aaKnown RBP23.02■■□□□ 1.28
XRCC3-214ENST00000555832 HSP90AB1P08238 724 aaKnown RBP23.01■■□□□ 1.27
XRCC3-214ENST00000555832 RGPD2P0DJD1 1756 aa23.01■■□□□ 1.27
XRCC3-214ENST00000555832 HMGB2P26583 209 aaKnown RBP23■■□□□ 1.27
XRCC3-214ENST00000555832 IFNL2Q8IZJ0 200 aa23■■□□□ 1.27
XRCC3-214ENST00000555832 PLSCR1O15162 318 aa22.98■■□□□ 1.27
XRCC3-214ENST00000555832 NEFMP07197 916 aa22.98■■□□□ 1.27
XRCC3-214ENST00000555832 C1orf141Q5JVX7 400 aa22.98■■□□□ 1.27
XRCC3-214ENST00000555832 DEFB132Q7Z7B7 95 aa22.98■■□□□ 1.27
XRCC3-214ENST00000555832 SYTL4Q96C24 671 aaPredicted RBP22.98■■□□□ 1.27
XRCC3-214ENST00000555832 KDRP35968 1356 aa22.98■■□□□ 1.27
XRCC3-214ENST00000555832 EN1Q05925 392 aaPredicted RBP22.97■■□□□ 1.27
XRCC3-214ENST00000555832 ACSBG1Q96GR2 724 aa22.97■■□□□ 1.27
XRCC3-214ENST00000555832 MYBBP1AQ9BQG0 1328 aaKnown RBP22.96■■□□□ 1.27
XRCC3-214ENST00000555832 PNNQ9H307 717 aaKnown RBP22.95■■□□□ 1.26
XRCC3-214ENST00000555832 HMOX1P09601 288 aa22.94■■□□□ 1.26
XRCC3-214ENST00000555832 ZNF530Q6P9A1 599 aaPredicted RBP22.94■■□□□ 1.26
XRCC3-214ENST00000555832 CYP27B1O15528 508 aa22.93■■□□□ 1.26
XRCC3-214ENST00000555832 U2AF1L5P0DN76 240 aaPredicted RBP22.93■■□□□ 1.26
XRCC3-214ENST00000555832 PRIM1P49642 420 aaKnown RBP22.93■■□□□ 1.26
XRCC3-214ENST00000555832 U2AF1Q01081 240 aaKnown RBP eCLIP22.93■■□□□ 1.26
XRCC3-214ENST00000555832 NKX1-1Q15270 411 aaPredicted RBP22.93■■□□□ 1.26
XRCC3-214ENST00000555832 NBPF14Q5TI25 921 aa22.93■■□□□ 1.26
XRCC3-214ENST00000555832 AEBP1Q8IUX7 1158 aa22.93■■□□□ 1.26
XRCC3-214ENST00000555832 PHKG2P15735 406 aa22.92■■□□□ 1.26
XRCC3-214ENST00000555832 CAMKK2Q96RR4 588 aa22.92■■□□□ 1.26
XRCC3-214ENST00000555832 KCNQ2O43526 872 aa22.91■■□□□ 1.26
XRCC3-214ENST00000555832 DCAF5Q96JK2 942 aa22.91■■□□□ 1.26
XRCC3-214ENST00000555832 FCHSD2O94868 740 aa22.9■■□□□ 1.26
XRCC3-214ENST00000555832 EZH2Q15910 746 aaKnown RBP22.9■■□□□ 1.26
XRCC3-214ENST00000555832 PRKRIP1Q9H875 184 aaPredicted RBP22.9■■□□□ 1.26
XRCC3-214ENST00000555832 PKD1L3Q7Z443 1732 aa22.9■■□□□ 1.26
XRCC3-214ENST00000555832 COL3A1P02461 1466 aaPredicted RBP22.9■■□□□ 1.26
XRCC3-214ENST00000555832 GAS2L2Q8NHY3 880 aa22.89■■□□□ 1.25
XRCC3-214ENST00000555832 TNS1Q9HBL0 1735 aaKnown RBP22.88■■□□□ 1.25
XRCC3-214ENST00000555832 ANP32CO43423 234 aa22.88■■□□□ 1.25
XRCC3-214ENST00000555832 AKAP4Q5JQC9 854 aa22.88■■□□□ 1.25
XRCC3-214ENST00000555832 SMARCC1Q92922 1105 aaPredicted RBP22.88■■□□□ 1.25
XRCC3-214ENST00000555832 NHSQ6T4R5 1651 aa22.87■■□□□ 1.25
XRCC3-214ENST00000555832 ERVV-2B6SEH9 535 aa22.87■■□□□ 1.25
XRCC3-214ENST00000555832 TMOD3Q9NYL9 352 aa22.87■■□□□ 1.25
XRCC3-214ENST00000555832 SBF2Q86WG5 1849 aa22.87■■□□□ 1.25
XRCC3-214ENST00000555832 KAT6BQ8WYB5 2073 aa22.86■■□□□ 1.25
XRCC3-214ENST00000555832 MPRIPQ6WCQ1 1025 aa22.86■■□□□ 1.25
XRCC3-214ENST00000555832 SLC27A3Q5K4L6 730 aa22.85■■□□□ 1.25
XRCC3-214ENST00000555832 PRKAR2BP31323 418 aa22.84■■□□□ 1.25
XRCC3-214ENST00000555832 TXNRD1Q16881 649 aa22.84■■□□□ 1.25
XRCC3-214ENST00000555832 CABP4P57796 275 aa22.83■■□□□ 1.25
XRCC3-214ENST00000555832 WDR43Q15061 677 aaKnown RBP eCLIP22.83■■□□□ 1.25
XRCC3-214ENST00000555832 SHANK3Q9BYB0 1731 aa22.82■■□□□ 1.24
XRCC3-214ENST00000555832 PTF1AQ7RTS3 328 aa22.82■■□□□ 1.24
XRCC3-214ENST00000555832 RSPH6AQ9H0K4 717 aa22.82■■□□□ 1.24
XRCC3-214ENST00000555832 RGPD3A6NKT7 1758 aaPredicted RBP22.81■■□□□ 1.24
XRCC3-214ENST00000555832 RGPD4Q7Z3J3 1758 aa22.81■■□□□ 1.24
XRCC3-214ENST00000555832 EP400Q96L91 3159 aa22.81■■□□□ 1.24
XRCC3-214ENST00000555832 MAPK8IP3Q9UPT6 1336 aa22.81■■□□□ 1.24
XRCC3-214ENST00000555832 MTHFSDQ2M296 383 aaKnown RBP22.8■■□□□ 1.24
XRCC3-214ENST00000555832 DOT1LQ8TEK3 1739 aa22.79■■□□□ 1.24
XRCC3-214ENST00000555832 GNAT3A8MTJ3 354 aa22.79■■□□□ 1.24
XRCC3-214ENST00000555832 RTF1Q92541 710 aaKnown RBP22.79■■□□□ 1.24
XRCC3-214ENST00000555832 PIGBQ92521 554 aa22.78■■□□□ 1.24
XRCC3-214ENST00000555832 STK32BQ9NY57 414 aa22.78■■□□□ 1.24
XRCC3-214ENST00000555832 BTAF1O14981 1849 aa22.76■■□□□ 1.23
XRCC3-214ENST00000555832 CCNL1Q9UK58 526 aaPredicted RBP22.76■■□□□ 1.23
XRCC3-214ENST00000555832 PALLDQ8WX93 1383 aa22.76■■□□□ 1.23
XRCC3-214ENST00000555832 MAP3K5Q99683 1374 aa22.76■■□□□ 1.23
XRCC3-214ENST00000555832 TEFQ10587 303 aa22.75■■□□□ 1.23
XRCC3-214ENST00000555832 RNMTO43148 476 aaKnown RBP22.74■■□□□ 1.23
XRCC3-214ENST00000555832 HTATSF1O43719 755 aaKnown RBP22.74■■□□□ 1.23
XRCC3-214ENST00000555832 PROM2Q8N271 834 aa22.73■■□□□ 1.23
XRCC3-214ENST00000555832 R3HDM1Q15032 1099 aaKnown RBP22.72■■□□□ 1.23
XRCC3-214ENST00000555832 NFATC2IPQ8NCF5 419 aa22.72■■□□□ 1.23
XRCC3-214ENST00000555832 SLC52A2Q9HAB3 445 aa22.72■■□□□ 1.23
XRCC3-214ENST00000555832 RREB1Q92766 1687 aa22.71■■□□□ 1.23
XRCC3-214ENST00000555832 PHACTR3Q96KR7 559 aa22.71■■□□□ 1.23
XRCC3-214ENST00000555832 KDM6AO15550 1401 aaPredicted RBP22.71■■□□□ 1.23
XRCC3-214ENST00000555832 SLC15A2Q16348 729 aa22.69■■□□□ 1.22
XRCC3-214ENST00000555832 LOC102724428A0A0B4J2F2 783 aa22.68■■□□□ 1.22
XRCC3-214ENST00000555832 SIK1P57059 783 aa22.68■■□□□ 1.22
XRCC3-214ENST00000555832 LMOD3Q0VAK6 560 aa22.68■■□□□ 1.22
XRCC3-214ENST00000555832 ASAP1Q9ULH1 1129 aa22.68■■□□□ 1.22
XRCC3-214ENST00000555832 PSDA5PKW4 1024 aaPredicted RBP22.67■■□□□ 1.22
XRCC3-214ENST00000555832 TTC5Q8N0Z6 440 aa22.67■■□□□ 1.22
XRCC3-214ENST00000555832 RBM42Q9BTD8 480 aaKnown RBP22.67■■□□□ 1.22
XRCC3-214ENST00000555832 LGR6Q9HBX8 967 aa22.67■■□□□ 1.22
XRCC3-214ENST00000555832 ATG3Q9NT62 314 aa22.67■■□□□ 1.22
XRCC3-214ENST00000555832 ATP6V1AP38606 617 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms