RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 NBR1Q14596 966 aa30.72■■■□□ 2.51
TMEM260-207ENST00000555497 ESCO1Q5FWF5 840 aa30.72■■■□□ 2.51
TMEM260-207ENST00000555497 C1orf115Q9H7X2 142 aa30.72■■■□□ 2.51
TMEM260-207ENST00000555497 API5Q9BZZ5 524 aaKnown RBP30.71■■■□□ 2.51
TMEM260-207ENST00000555497 SLC4A3P48751 1232 aa30.7■■■□□ 2.51
TMEM260-207ENST00000555497 LTV1Q96GA3 475 aaPredicted RBP30.7■■■□□ 2.51
TMEM260-207ENST00000555497 RTF1Q92541 710 aaKnown RBP30.69■■■□□ 2.5
TMEM260-207ENST00000555497 LTN1O94822 1766 aa30.68■■■□□ 2.5
TMEM260-207ENST00000555497 GAS2L2Q8NHY3 880 aa30.68■■■□□ 2.5
TMEM260-207ENST00000555497 PSME1Q06323 249 aa30.67■■■□□ 2.5
TMEM260-207ENST00000555497 RGS12O14924 1447 aa30.66■■■□□ 2.5
TMEM260-207ENST00000555497 SIRT2Q8IXJ6 389 aa30.66■■■□□ 2.5
TMEM260-207ENST00000555497 NUCB1Q02818 461 aa30.65■■■□□ 2.5
TMEM260-207ENST00000555497 NFAT5O94916 1531 aa30.65■■■□□ 2.5
TMEM260-207ENST00000555497 ORAI2Q96SN7 254 aa30.65■■■□□ 2.5
TMEM260-207ENST00000555497 CHMP4BQ9H444 224 aaKnown RBP30.65■■■□□ 2.5
TMEM260-207ENST00000555497 TSPYL4Q9UJ04 414 aa30.64■■■□□ 2.5
TMEM260-207ENST00000555497 USHBP1Q8N6Y0 703 aa30.62■■■□□ 2.49
TMEM260-207ENST00000555497 RTL1A6NKG5 1358 aa30.62■■■□□ 2.49
TMEM260-207ENST00000555497 HAP1P54257 671 aaPredicted RBP30.62■■■□□ 2.49
TMEM260-207ENST00000555497 IP6K1Q92551 441 aa30.61■■■□□ 2.49
TMEM260-207ENST00000555497 INTS3Q68E01 1043 aaKnown RBP30.61■■■□□ 2.49
TMEM260-207ENST00000555497 LRRC37A3O60309 1634 aa30.61■■■□□ 2.49
TMEM260-207ENST00000555497 HTATSF1O43719 755 aaKnown RBP30.6■■■□□ 2.49
TMEM260-207ENST00000555497 LNPKQ9C0E8 428 aa30.6■■■□□ 2.49
TMEM260-207ENST00000555497 GNAT3A8MTJ3 354 aa30.59■■■□□ 2.49
TMEM260-207ENST00000555497 XPCQ01831 940 aaPredicted RBP30.59■■■□□ 2.49
TMEM260-207ENST00000555497 CHD1LQ86WJ1 897 aa30.59■■■□□ 2.49
TMEM260-207ENST00000555497 MSH6P52701 1360 aa30.58■■■□□ 2.49
TMEM260-207ENST00000555497 IL17REQ8NFR9 667 aa30.58■■■□□ 2.49
TMEM260-207ENST00000555497 SLC4A2P04920 1241 aa30.57■■■□□ 2.48
TMEM260-207ENST00000555497 NBPF6Q5VWK0 638 aa30.55■■■□□ 2.48
TMEM260-207ENST00000555497 GCC1Q96CN9 775 aa30.55■■■□□ 2.48
TMEM260-207ENST00000555497 NBPF4Q96M43 638 aa30.55■■■□□ 2.48
TMEM260-207ENST00000555497 MAP3K5Q99683 1374 aa30.55■■■□□ 2.48
TMEM260-207ENST00000555497 G2E3Q7L622 706 aa30.54■■■□□ 2.48
TMEM260-207ENST00000555497 PTPRCP08575 1304 aa30.54■■■□□ 2.48
TMEM260-207ENST00000555497 PROSER2Q86WR7 435 aaPredicted RBP30.54■■■□□ 2.48
TMEM260-207ENST00000555497 ZBTB7CA1YPR0 619 aa30.53■■■□□ 2.48
TMEM260-207ENST00000555497 ANKRD45Q5TZF3 282 aa30.53■■■□□ 2.48
TMEM260-207ENST00000555497 DAXXQ9UER7 740 aaPredicted RBP30.53■■■□□ 2.48
TMEM260-207ENST00000555497 RGPD2P0DJD1 1756 aa30.52■■■□□ 2.48
TMEM260-207ENST00000555497 KCNH5Q8NCM2 988 aa30.52■■■□□ 2.48
TMEM260-207ENST00000555497 TBC1D32Q96NH3 1257 aa30.52■■■□□ 2.48
TMEM260-207ENST00000555497 PLEKHG5O94827 1062 aa30.5■■■□□ 2.47
TMEM260-207ENST00000555497 PHRF1Q9P1Y6 1649 aaKnown RBP30.49■■■□□ 2.47
TMEM260-207ENST00000555497 GCP02774 474 aa30.48■■■□□ 2.47
TMEM260-207ENST00000555497 LRRC59Q96AG4 307 aaKnown RBP30.47■■■□□ 2.47
TMEM260-207ENST00000555497 UPF2Q9HAU5 1272 aaKnown RBP30.47■■■□□ 2.47
TMEM260-207ENST00000555497 ATP10DQ9P241 1426 aa30.47■■■□□ 2.47
TMEM260-207ENST00000555497 TRPM3Q9HCF6 1732 aaPredicted RBP30.46■■■□□ 2.47
TMEM260-207ENST00000555497 TAF7Q15545 349 aaPredicted RBP30.46■■■□□ 2.47
TMEM260-207ENST00000555497 SLIT3O75094 1523 aa30.45■■■□□ 2.47
TMEM260-207ENST00000555497 F6X3S4 739 aa30.45■■■□□ 2.47
TMEM260-207ENST00000555497 ARHGEF25Q86VW2 580 aa30.45■■■□□ 2.47
TMEM260-207ENST00000555497 MEIS3Q99687 375 aa30.45■■■□□ 2.47
TMEM260-207ENST00000555497 DNAJC5Q9H3Z4 198 aa30.45■■■□□ 2.47
TMEM260-207ENST00000555497 C1orf167Q5SNV9 1468 aa30.44■■■□□ 2.46
TMEM260-207ENST00000555497 LMOD2Q6P5Q4 547 aa30.44■■■□□ 2.46
TMEM260-207ENST00000555497 KRT28Q7Z3Y7 464 aa30.43■■■□□ 2.46
TMEM260-207ENST00000555497 ANKRD44Q8N8A2 993 aa30.43■■■□□ 2.46
TMEM260-207ENST00000555497 C19orf44Q9H6X5 657 aa30.42■■■□□ 2.46
TMEM260-207ENST00000555497 DCTPP1Q9H773 170 aa30.42■■■□□ 2.46
TMEM260-207ENST00000555497 MFAP1P55081 439 aaKnown RBP30.42■■■□□ 2.46
TMEM260-207ENST00000555497 NECTIN2Q92692 538 aa30.42■■■□□ 2.46
TMEM260-207ENST00000555497 FAM208AQ9UK61 1670 aaKnown RBP30.42■■■□□ 2.46
TMEM260-207ENST00000555497 CEP85Q6P2H3 762 aa30.41■■■□□ 2.46
TMEM260-207ENST00000555497 LGR6Q9HBX8 967 aa30.41■■■□□ 2.46
TMEM260-207ENST00000555497 CEMIPQ8WUJ3 1361 aa30.4■■■□□ 2.46
TMEM260-207ENST00000555497 BABAM1Q9NWV8 329 aa30.4■■■□□ 2.46
TMEM260-207ENST00000555497 SLC4A10Q6U841 1118 aa30.39■■■□□ 2.46
TMEM260-207ENST00000555497 STK31Q9BXU1 1019 aa30.39■■■□□ 2.46
TMEM260-207ENST00000555497 BMP2KLQ5H9B9 411 aa30.39■■■□□ 2.46
TMEM260-207ENST00000555497 RTL5Q5HYW3 569 aaPredicted RBP30.38■■■□□ 2.45
TMEM260-207ENST00000555497 CCDC30Q5VVM6 783 aa30.38■■■□□ 2.45
TMEM260-207ENST00000555497 RPAP2Q8IXW5 612 aaPredicted RBP30.38■■■□□ 2.45
TMEM260-207ENST00000555497 STRCP1A6NGW2 1772 aa30.37■■■□□ 2.45
TMEM260-207ENST00000555497 AXIN2Q9Y2T1 843 aa30.37■■■□□ 2.45
TMEM260-207ENST00000555497 KIF1AQ12756 1690 aa30.36■■■□□ 2.45
TMEM260-207ENST00000555497 FLIIQ13045 1269 aa30.36■■■□□ 2.45
TMEM260-207ENST00000555497 C22orf23Q9BZE7 217 aa30.36■■■□□ 2.45
TMEM260-207ENST00000555497 MED1Q15648 1581 aaPredicted RBP30.35■■■□□ 2.45
TMEM260-207ENST00000555497 CCT4P50991 539 aaKnown RBP30.35■■■□□ 2.45
TMEM260-207ENST00000555497 ANKRD24Q8TF21 1146 aa30.34■■■□□ 2.45
TMEM260-207ENST00000555497 CACNA1FO60840 1977 aa30.34■■■□□ 2.45
TMEM260-207ENST00000555497 NCAPD2Q15021 1401 aa30.34■■■□□ 2.45
TMEM260-207ENST00000555497 SOS1Q07889 1333 aaPredicted RBP30.33■■■□□ 2.45
TMEM260-207ENST00000555497 TMEM94Q12767 1356 aa30.32■■■□□ 2.45
TMEM260-207ENST00000555497 LMO7Q8WWI1 1683 aa30.32■■■□□ 2.44
TMEM260-207ENST00000555497 BECN1Q14457 450 aa30.32■■■□□ 2.44
TMEM260-207ENST00000555497 ZNF530Q6P9A1 599 aaPredicted RBP30.32■■■□□ 2.44
TMEM260-207ENST00000555497 FKBP5Q13451 457 aaPredicted RBP30.31■■■□□ 2.44
TMEM260-207ENST00000555497 DDX17Q92841 729 aaKnown RBP30.31■■■□□ 2.44
TMEM260-207ENST00000555497 MST1RQ04912 1400 aa30.31■■■□□ 2.44
TMEM260-207ENST00000555497 RGPD5Q99666 1765 aa30.31■■■□□ 2.44
TMEM260-207ENST00000555497 PLEKHM2Q8IWE5 1019 aa30.31■■■□□ 2.44
TMEM260-207ENST00000555497 C16orf71Q8IYS4 520 aaPredicted RBP30.31■■■□□ 2.44
TMEM260-207ENST00000555497 ALS2Q96Q42 1657 aa30.31■■■□□ 2.44
TMEM260-207ENST00000555497 PLEKHO1Q53GL0 409 aaPredicted RBP30.3■■■□□ 2.44
TMEM260-207ENST00000555497 AKAP4Q5JQC9 854 aa30.3■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms