RNA–Protein interactions for RNA: ENST00000555489.5

RPGRIP1-208, Transcript of RPGR interacting protein 1, humanhuman

TSL 1 (best)

Gene RPGRIP1, Length 2,139 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-208ENST00000555489 MCM4P33991 863 aa12.38□□□□□ -0.43
RPGRIP1-208ENST00000555489 L1TD1Q5T7N2 865 aaKnown RBP12.38□□□□□ -0.43
RPGRIP1-208ENST00000555489 TBC1D9Q6ZT07 1266 aa12.38□□□□□ -0.43
RPGRIP1-208ENST00000555489 ANKRD44Q8N8A2 993 aa12.38□□□□□ -0.43
RPGRIP1-208ENST00000555489 CIZ1Q9ULV3 898 aaPredicted RBP12.38□□□□□ -0.43
RPGRIP1-208ENST00000555489 ATP10DQ9P241 1426 aa12.37□□□□□ -0.43
RPGRIP1-208ENST00000555489 RTF1Q92541 710 aaKnown RBP12.37□□□□□ -0.43
RPGRIP1-208ENST00000555489 MAP3K19Q56UN5 1328 aa12.37□□□□□ -0.43
RPGRIP1-208ENST00000555489 MCM10Q7L590 875 aa12.37□□□□□ -0.43
RPGRIP1-208ENST00000555489 AMOTL2Q9Y2J4 779 aa12.37□□□□□ -0.43
RPGRIP1-208ENST00000555489 ANKARQ7Z5J8 1434 aa12.36□□□□□ -0.43
RPGRIP1-208ENST00000555489 DDX11L8A8MPP1 907 aa12.36□□□□□ -0.43
RPGRIP1-208ENST00000555489 GAS2L2Q8NHY3 880 aa12.36□□□□□ -0.43
RPGRIP1-208ENST00000555489 SLC26A8Q96RN1 970 aa12.36□□□□□ -0.43
RPGRIP1-208ENST00000555489 NUTM2FA1L443 756 aa12.35□□□□□ -0.43
RPGRIP1-208ENST00000555489 DDIT3P35638 169 aa12.35□□□□□ -0.43
RPGRIP1-208ENST00000555489 SPRYD3Q8NCJ5 442 aa12.35□□□□□ -0.43
RPGRIP1-208ENST00000555489 BRPF3Q9ULD4 1205 aa12.35□□□□□ -0.43
RPGRIP1-208ENST00000555489 MSH6P52701 1360 aa12.35□□□□□ -0.43
RPGRIP1-208ENST00000555489 IGSF1Q8N6C5 1336 aa12.35□□□□□ -0.43
RPGRIP1-208ENST00000555489 HTATSF1O43719 755 aaKnown RBP12.35□□□□□ -0.43
RPGRIP1-208ENST00000555489 CEP85Q6P2H3 762 aa12.35□□□□□ -0.43
RPGRIP1-208ENST00000555489 PLEKHM2Q8IWE5 1019 aa12.35□□□□□ -0.43
RPGRIP1-208ENST00000555489 RTL1A6NKG5 1358 aa12.35□□□□□ -0.43
RPGRIP1-208ENST00000555489 HSP90AB1P08238 724 aaKnown RBP12.34□□□□□ -0.43
RPGRIP1-208ENST00000555489 THEMISQ8N1K5 641 aaPredicted RBP12.34□□□□□ -0.43
RPGRIP1-208ENST00000555489 NGDNQ8NEJ9 315 aaKnown RBP12.34□□□□□ -0.43
RPGRIP1-208ENST00000555489 SOS1Q07889 1333 aaPredicted RBP12.34□□□□□ -0.43
RPGRIP1-208ENST00000555489 HMMRO75330 724 aa12.34□□□□□ -0.43
RPGRIP1-208ENST00000555489 TTC22Q5TAA0 569 aa12.34□□□□□ -0.43
RPGRIP1-208ENST00000555489 KIF2CQ99661 725 aa12.34□□□□□ -0.43
RPGRIP1-208ENST00000555489 XRN1Q8IZH2 1706 aaKnown RBP12.33□□□□□ -0.44
RPGRIP1-208ENST00000555489 SLC4A2P04920 1241 aa12.33□□□□□ -0.44
RPGRIP1-208ENST00000555489 GSPT1P15170 499 aaKnown RBP12.33□□□□□ -0.44
RPGRIP1-208ENST00000555489 PTMSP20962 102 aa12.33□□□□□ -0.44
RPGRIP1-208ENST00000555489 AMPHP49418 695 aa12.33□□□□□ -0.44
RPGRIP1-208ENST00000555489 CCT4P50991 539 aaKnown RBP12.33□□□□□ -0.44
RPGRIP1-208ENST00000555489 KRT24Q2M2I5 525 aa12.33□□□□□ -0.44
RPGRIP1-208ENST00000555489 CASC1Q6TDU7 716 aa12.33□□□□□ -0.44
RPGRIP1-208ENST00000555489 TSPYL4Q9UJ04 414 aa12.33□□□□□ -0.44
RPGRIP1-208ENST00000555489 PIK3C2AO00443 1686 aa12.33□□□□□ -0.44
RPGRIP1-208ENST00000555489 USP54Q70EL1 1684 aa12.33□□□□□ -0.44
RPGRIP1-208ENST00000555489 K7ELQ4 463 aaPredicted RBP12.32□□□□□ -0.44
RPGRIP1-208ENST00000555489 MTHFSDQ2M296 383 aaKnown RBP12.32□□□□□ -0.44
RPGRIP1-208ENST00000555489 LRRC37A3O60309 1634 aa12.32□□□□□ -0.44
RPGRIP1-208ENST00000555489 GBP4Q96PP9 640 aa12.32□□□□□ -0.44
RPGRIP1-208ENST00000555489 HSP90AA1P07900 732 aaKnown RBP12.31□□□□□ -0.44
RPGRIP1-208ENST00000555489 SOX12O15370 315 aa12.31□□□□□ -0.44
RPGRIP1-208ENST00000555489 CEBPAP49715 358 aaPredicted RBP12.31□□□□□ -0.44
RPGRIP1-208ENST00000555489 EYA1Q99502 592 aa12.31□□□□□ -0.44
RPGRIP1-208ENST00000555489 STK31Q9BXU1 1019 aa12.31□□□□□ -0.44
RPGRIP1-208ENST00000555489 BABAM1Q9NWV8 329 aa12.31□□□□□ -0.44
RPGRIP1-208ENST00000555489 ISY1Q9ULR0 285 aaKnown RBP12.31□□□□□ -0.44
RPGRIP1-208ENST00000555489 FER1L4A9Z1Z3 1794 aa12.3□□□□□ -0.44
RPGRIP1-208ENST00000555489 TRAK2O60296 914 aa12.3□□□□□ -0.44
RPGRIP1-208ENST00000555489 RABEP1Q15276 862 aa12.3□□□□□ -0.44
RPGRIP1-208ENST00000555489 MEIS3Q99687 375 aa12.3□□□□□ -0.44
RPGRIP1-208ENST00000555489 CEP170BQ9Y4F5 1589 aaPredicted RBP12.3□□□□□ -0.44
RPGRIP1-208ENST00000555489 GOLGA6L3A6NEY3 463 aa12.29□□□□□ -0.44
RPGRIP1-208ENST00000555489 RAB3GAP1Q15042 981 aa12.29□□□□□ -0.44
RPGRIP1-208ENST00000555489 NLRP6P59044 892 aa12.29□□□□□ -0.44
RPGRIP1-208ENST00000555489 CCDC30Q5VVM6 783 aa12.29□□□□□ -0.44
RPGRIP1-208ENST00000555489 FSD2A1L4K1 749 aa12.28□□□□□ -0.44
RPGRIP1-208ENST00000555489 GNAT3A8MTJ3 354 aa12.28□□□□□ -0.44
RPGRIP1-208ENST00000555489 FOXO3O43524 673 aa12.28□□□□□ -0.44
RPGRIP1-208ENST00000555489 OSBPL3Q9H4L5 887 aa12.28□□□□□ -0.44
RPGRIP1-208ENST00000555489 RGPD8O14715 1765 aaPredicted RBP12.28□□□□□ -0.44
RPGRIP1-208ENST00000555489 REC8O95072 547 aa12.28□□□□□ -0.44
RPGRIP1-208ENST00000555489 GNAI2P04899 355 aa12.28□□□□□ -0.44
RPGRIP1-208ENST00000555489 SKOR2Q2VWA4 1001 aaPredicted RBP12.28□□□□□ -0.44
RPGRIP1-208ENST00000555489 FAM208AQ9UK61 1670 aaKnown RBP12.27□□□□□ -0.44
RPGRIP1-208ENST00000555489 GNAI3P08754 354 aa12.27□□□□□ -0.45
RPGRIP1-208ENST00000555489 HOXC9P31274 260 aa12.27□□□□□ -0.45
RPGRIP1-208ENST00000555489 FAM43AQ8N2R8 423 aa12.27□□□□□ -0.45
RPGRIP1-208ENST00000555489 TNPO1Q92973 898 aaKnown RBP12.27□□□□□ -0.45
RPGRIP1-208ENST00000555489 RTN4Q9NQC3 1192 aaKnown RBP12.27□□□□□ -0.45
RPGRIP1-208ENST00000555489 MAP3K5Q99683 1374 aa12.27□□□□□ -0.45
RPGRIP1-208ENST00000555489 PXDNLA1KZ92 1463 aa12.27□□□□□ -0.45
RPGRIP1-208ENST00000555489 SDSP20132 328 aa12.26□□□□□ -0.45
RPGRIP1-208ENST00000555489 SLC4A10Q6U841 1118 aa12.26□□□□□ -0.45
RPGRIP1-208ENST00000555489 USP26Q9BXU7 913 aa12.26□□□□□ -0.45
RPGRIP1-208ENST00000555489 MIS18AQ9NYP9 233 aa12.26□□□□□ -0.45
RPGRIP1-208ENST00000555489 C16orf71Q8IYS4 520 aaPredicted RBP12.26□□□□□ -0.45
RPGRIP1-208ENST00000555489 NWD1Q149M9 1564 aa12.25□□□□□ -0.45
RPGRIP1-208ENST00000555489 CD2BP2O95400 341 aaKnown RBP12.25□□□□□ -0.45
RPGRIP1-208ENST00000555489 FLIIQ13045 1269 aa12.25□□□□□ -0.45
RPGRIP1-208ENST00000555489 CLEC17AQ6ZS10 378 aa12.25□□□□□ -0.45
RPGRIP1-208ENST00000555489 MARF1Q9Y4F3 1742 aaKnown RBP12.25□□□□□ -0.45
RPGRIP1-208ENST00000555489 GOLGA6L22H0YM25 854 aa12.25□□□□□ -0.45
RPGRIP1-208ENST00000555489 MRE11P49959 708 aa12.25□□□□□ -0.45
RPGRIP1-208ENST00000555489 G2E3Q7L622 706 aa12.25□□□□□ -0.45
RPGRIP1-208ENST00000555489 CHMP4AQ9BY43 222 aa12.25□□□□□ -0.45
RPGRIP1-208ENST00000555489 N4BP2Q86UW6 1770 aaPredicted RBP12.24□□□□□ -0.45
RPGRIP1-208ENST00000555489 CACNA1FO60840 1977 aa12.24□□□□□ -0.45
RPGRIP1-208ENST00000555489 ST18O60284 1047 aa12.24□□□□□ -0.45
RPGRIP1-208ENST00000555489 KCNA6P17658 529 aa12.24□□□□□ -0.45
RPGRIP1-208ENST00000555489 FKBP5Q13451 457 aaPredicted RBP12.24□□□□□ -0.45
RPGRIP1-208ENST00000555489 ABTB2Q8N961 1025 aa12.24□□□□□ -0.45
RPGRIP1-208ENST00000555489 F6X3S4 739 aa12.23□□□□□ -0.45
RPGRIP1-208ENST00000555489 ERC2O15083 957 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms