RNA–Protein interactions for RNA: ENST00000555382.5

PRKCH-215, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 691 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-215ENST00000555382 SLC16A10Q8TF71 515 aa13.24□□□□□ -0.29
PRKCH-215ENST00000555382 SLC12A5Q9H2X9 1139 aa13.24□□□□□ -0.29
PRKCH-215ENST00000555382 GPR162Q16538 588 aa13.23□□□□□ -0.29
PRKCH-215ENST00000555382 DOT1LQ8TEK3 1739 aa13.22□□□□□ -0.29
PRKCH-215ENST00000555382 FAM208AQ9UK61 1670 aaKnown RBP13.22□□□□□ -0.29
PRKCH-215ENST00000555382 CSB-PGBD3P0DP91 1061 aa13.22□□□□□ -0.29
PRKCH-215ENST00000555382 HDGFL2Q7Z4V5 671 aaPredicted RBP13.22□□□□□ -0.29
PRKCH-215ENST00000555382 EDC4Q6P2E9 1401 aaKnown RBP13.22□□□□□ -0.29
PRKCH-215ENST00000555382 ATP10DQ9P241 1426 aa13.22□□□□□ -0.29
PRKCH-215ENST00000555382 A0A1W2PP64 1363 aa13.21□□□□□ -0.29
PRKCH-215ENST00000555382 SLC27A3Q5K4L6 730 aa13.21□□□□□ -0.29
PRKCH-215ENST00000555382 NPC1L1Q9UHC9 1359 aa13.2□□□□□ -0.3
PRKCH-215ENST00000555382 SOX12O15370 315 aa13.2□□□□□ -0.3
PRKCH-215ENST00000555382 IL2RBP14784 551 aa13.2□□□□□ -0.3
PRKCH-215ENST00000555382 TMC1Q8TDI8 760 aa13.2□□□□□ -0.3
PRKCH-215ENST00000555382 KTN1Q86UP2 1357 aaKnown RBP13.2□□□□□ -0.3
PRKCH-215ENST00000555382 PER1O15534 1290 aaPredicted RBP13.19□□□□□ -0.3
PRKCH-215ENST00000555382 PANK3Q9H999 370 aa13.18□□□□□ -0.3
PRKCH-215ENST00000555382 KAT6BQ8WYB5 2073 aa13.17□□□□□ -0.3
PRKCH-215ENST00000555382 POLD1P28340 1107 aa13.17□□□□□ -0.3
PRKCH-215ENST00000555382 CARD14Q9BXL6 1004 aa13.17□□□□□ -0.3
PRKCH-215ENST00000555382 TOGARAM1Q9Y4F4 1720 aa13.16□□□□□ -0.3
PRKCH-215ENST00000555382 KCNQ4P56696 695 aa13.16□□□□□ -0.3
PRKCH-215ENST00000555382 NLRP2Q9NX02 1062 aa13.16□□□□□ -0.3
PRKCH-215ENST00000555382 ANKRD26Q9UPS8 1709 aa13.16□□□□□ -0.3
PRKCH-215ENST00000555382 KIF20BQ96Q89 1820 aa13.16□□□□□ -0.3
PRKCH-215ENST00000555382 CGNL1Q0VF96 1302 aa13.15□□□□□ -0.3
PRKCH-215ENST00000555382 C5P01031 1676 aa13.15□□□□□ -0.3
PRKCH-215ENST00000555382 CICQ96RK0 1608 aaPredicted RBP13.15□□□□□ -0.3
PRKCH-215ENST00000555382 ANKRD24Q8TF21 1146 aa13.15□□□□□ -0.3
PRKCH-215ENST00000555382 TAF1LQ8IZX4 1826 aa13.15□□□□□ -0.3
PRKCH-215ENST00000555382 MEGF6O75095 1541 aa13.14□□□□□ -0.31
PRKCH-215ENST00000555382 PCNTO95613 3336 aa13.14□□□□□ -0.31
PRKCH-215ENST00000555382 GRIN3BO60391 1043 aa13.14□□□□□ -0.31
PRKCH-215ENST00000555382 NME9Q86XW9 330 aa13.14□□□□□ -0.31
PRKCH-215ENST00000555382 KNSTRNQ9Y448 316 aa13.14□□□□□ -0.31
PRKCH-215ENST00000555382 RGPD2P0DJD1 1756 aa13.14□□□□□ -0.31
PRKCH-215ENST00000555382 NSD3Q9BZ95 1437 aa13.13□□□□□ -0.31
PRKCH-215ENST00000555382 HSPA6P17066 643 aa13.13□□□□□ -0.31
PRKCH-215ENST00000555382 AMER1Q5JTC6 1135 aaPredicted RBP13.13□□□□□ -0.31
PRKCH-215ENST00000555382 PELP1Q8IZL8 1130 aaKnown RBP13.13□□□□□ -0.31
PRKCH-215ENST00000555382 KLHL34Q8N239 644 aa13.13□□□□□ -0.31
PRKCH-215ENST00000555382 POLR3GLQ9BT43 218 aa13.13□□□□□ -0.31
PRKCH-215ENST00000555382 TFCP2L1Q9NZI6 479 aa13.13□□□□□ -0.31
PRKCH-215ENST00000555382 FYB1O15117 783 aa13.12□□□□□ -0.31
PRKCH-215ENST00000555382 DDX10Q13206 875 aaKnown RBP13.12□□□□□ -0.31
PRKCH-215ENST00000555382 COL23A1Q86Y22 540 aaPredicted RBP13.12□□□□□ -0.31
PRKCH-215ENST00000555382 PRIM1P49642 420 aaKnown RBP13.11□□□□□ -0.31
PRKCH-215ENST00000555382 CD2APQ9Y5K6 639 aa13.1□□□□□ -0.31
PRKCH-215ENST00000555382 KIAA1551Q9HCM1 1747 aa13.1□□□□□ -0.31
PRKCH-215ENST00000555382 UBR3Q6ZT12 1888 aa13.1□□□□□ -0.31
PRKCH-215ENST00000555382 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.09□□□□□ -0.31
PRKCH-215ENST00000555382 IP6K1Q92551 441 aa13.09□□□□□ -0.31
PRKCH-215ENST00000555382 KIF3CO14782 793 aa13.08□□□□□ -0.32
PRKCH-215ENST00000555382 AMIGO3Q86WK7 504 aa13.08□□□□□ -0.32
PRKCH-215ENST00000555382 DDX54Q8TDD1 881 aaKnown RBP13.08□□□□□ -0.32
PRKCH-215ENST00000555382 GPBP1L1Q9HC44 474 aaPredicted RBP13.08□□□□□ -0.32
PRKCH-215ENST00000555382 CCNL1Q9UK58 526 aaPredicted RBP13.08□□□□□ -0.32
PRKCH-215ENST00000555382 C4BP0C0L5 1744 aa13.08□□□□□ -0.32
PRKCH-215ENST00000555382 MAP2P11137 1827 aaKnown RBP13.07□□□□□ -0.32
PRKCH-215ENST00000555382 MSL1Q68DK7 614 aa13.07□□□□□ -0.32
PRKCH-215ENST00000555382 KIF13BQ9NQT8 1826 aa13.06□□□□□ -0.32
PRKCH-215ENST00000555382 COG3Q96JB2 828 aa13.06□□□□□ -0.32
PRKCH-215ENST00000555382 KIF24Q5T7B8 1368 aa13.06□□□□□ -0.32
PRKCH-215ENST00000555382 RALBP1Q15311 655 aa13.05□□□□□ -0.32
PRKCH-215ENST00000555382 DNAJC5GQ8N7S2 189 aa13.05□□□□□ -0.32
PRKCH-215ENST00000555382 MAP3K19Q56UN5 1328 aa13.05□□□□□ -0.32
PRKCH-215ENST00000555382 SYTL4Q96C24 671 aaPredicted RBP13.04□□□□□ -0.32
PRKCH-215ENST00000555382 ITGB4P16144 1822 aa13.04□□□□□ -0.32
PRKCH-215ENST00000555382 PKD1L3Q7Z443 1732 aa13.03□□□□□ -0.32
PRKCH-215ENST00000555382 HOXC9P31274 260 aa13.03□□□□□ -0.32
PRKCH-215ENST00000555382 ZCRB1Q8TBF4 217 aaKnown RBP13.03□□□□□ -0.32
PRKCH-215ENST00000555382 GGNBP2Q9H3C7 697 aa13.03□□□□□ -0.32
PRKCH-215ENST00000555382 ZNF526Q8TF50 670 aaPredicted RBP13.02□□□□□ -0.33
PRKCH-215ENST00000555382 IGSF1Q8N6C5 1336 aa13.02□□□□□ -0.33
PRKCH-215ENST00000555382 RTL1A6NKG5 1358 aa13.02□□□□□ -0.33
PRKCH-215ENST00000555382 PALLDQ8WX93 1383 aa13.02□□□□□ -0.33
PRKCH-215ENST00000555382 SMG6Q86US8 1419 aaKnown RBP13.02□□□□□ -0.33
PRKCH-215ENST00000555382 WDR90Q96KV7 1748 aa13.02□□□□□ -0.33
PRKCH-215ENST00000555382 MORC1Q86VD1 984 aa13.01□□□□□ -0.33
PRKCH-215ENST00000555382 NCAPD2Q15021 1401 aa13.01□□□□□ -0.33
PRKCH-215ENST00000555382 BRCA1P38398 1863 aaKnown RBP13.01□□□□□ -0.33
PRKCH-215ENST00000555382 PXDNLA1KZ92 1463 aa13□□□□□ -0.33
PRKCH-215ENST00000555382 INSRP06213 1382 aa13□□□□□ -0.33
PRKCH-215ENST00000555382 LTV1Q96GA3 475 aaPredicted RBP13□□□□□ -0.33
PRKCH-215ENST00000555382 PRKRIP1Q9H875 184 aaPredicted RBP13□□□□□ -0.33
PRKCH-215ENST00000555382 FBLN1P23142 703 aa12.99□□□□□ -0.33
PRKCH-215ENST00000555382 NBPF6Q5VWK0 638 aa12.99□□□□□ -0.33
PRKCH-215ENST00000555382 FLAD1Q8NFF5 587 aa12.99□□□□□ -0.33
PRKCH-215ENST00000555382 NBPF4Q96M43 638 aa12.99□□□□□ -0.33
PRKCH-215ENST00000555382 MSH5O43196 834 aa12.98□□□□□ -0.33
PRKCH-215ENST00000555382 APLP1P51693 650 aa12.98□□□□□ -0.33
PRKCH-215ENST00000555382 CC2D1BQ5T0F9 858 aaKnown RBP12.98□□□□□ -0.33
PRKCH-215ENST00000555382 DIEXFQ68CQ4 756 aaKnown RBP12.98□□□□□ -0.33
PRKCH-215ENST00000555382 ANP32CO43423 234 aa12.97□□□□□ -0.33
PRKCH-215ENST00000555382 SMIM5Q71RC9 77 aa12.97□□□□□ -0.33
PRKCH-215ENST00000555382 N4BP2Q86UW6 1770 aaPredicted RBP12.97□□□□□ -0.33
PRKCH-215ENST00000555382 MYBBP1AQ9BQG0 1328 aaKnown RBP12.96□□□□□ -0.33
PRKCH-215ENST00000555382 CYP27B1O15528 508 aa12.96□□□□□ -0.33
PRKCH-215ENST00000555382 POLKQ9UBT6 870 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms