RNA–Protein interactions for RNA: ENST00000555185.5

PRKCH-213, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-213ENST00000555185 ANKRD24Q8TF21 1146 aa12.69□□□□□ -0.38
PRKCH-213ENST00000555185 IGSF1Q8N6C5 1336 aa12.68□□□□□ -0.38
PRKCH-213ENST00000555185 STAC3Q96MF2 364 aa12.68□□□□□ -0.38
PRKCH-213ENST00000555185 CD2APQ9Y5K6 639 aa12.68□□□□□ -0.38
PRKCH-213ENST00000555185 SMIM5Q71RC9 77 aa12.67□□□□□ -0.38
PRKCH-213ENST00000555185 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.67□□□□□ -0.38
PRKCH-213ENST00000555185 TNS4Q8IZW8 715 aa12.66□□□□□ -0.38
PRKCH-213ENST00000555185 LTV1Q96GA3 475 aaPredicted RBP12.66□□□□□ -0.38
PRKCH-213ENST00000555185 C5P01031 1676 aa12.66□□□□□ -0.38
PRKCH-213ENST00000555185 ANKRD36BQ8N2N9 1353 aa12.66□□□□□ -0.38
PRKCH-213ENST00000555185 TTC21AQ8NDW8 1320 aa12.65□□□□□ -0.38
PRKCH-213ENST00000555185 NMRK2Q9NPI5 230 aa12.65□□□□□ -0.38
PRKCH-213ENST00000555185 RGPD2P0DJD1 1756 aa12.64□□□□□ -0.39
PRKCH-213ENST00000555185 TOMM70O94826 608 aa12.64□□□□□ -0.39
PRKCH-213ENST00000555185 PRELPP51888 382 aa12.64□□□□□ -0.39
PRKCH-213ENST00000555185 AMIGO3Q86WK7 504 aa12.64□□□□□ -0.39
PRKCH-213ENST00000555185 NME9Q86XW9 330 aa12.64□□□□□ -0.39
PRKCH-213ENST00000555185 MON2Q7Z3U7 1717 aa12.64□□□□□ -0.39
PRKCH-213ENST00000555185 KTN1Q86UP2 1357 aaKnown RBP12.64□□□□□ -0.39
PRKCH-213ENST00000555185 TAF1LQ8IZX4 1826 aa12.63□□□□□ -0.39
PRKCH-213ENST00000555185 KLRG1Q96E93 195 aa12.63□□□□□ -0.39
PRKCH-213ENST00000555185 ZNF692Q9BU19 519 aaPredicted RBP12.63□□□□□ -0.39
PRKCH-213ENST00000555185 USP54Q70EL1 1684 aa12.63□□□□□ -0.39
PRKCH-213ENST00000555185 EVC2Q86UK5 1308 aa12.62□□□□□ -0.39
PRKCH-213ENST00000555185 TOGARAM1Q9Y4F4 1720 aa12.62□□□□□ -0.39
PRKCH-213ENST00000555185 USP47Q96K76 1375 aa12.61□□□□□ -0.39
PRKCH-213ENST00000555185 PHF14O94880 888 aa12.61□□□□□ -0.39
PRKCH-213ENST00000555185 CICQ96RK0 1608 aaPredicted RBP12.6□□□□□ -0.39
PRKCH-213ENST00000555185 JMYQ8N9B5 988 aa12.6□□□□□ -0.39
PRKCH-213ENST00000555185 N4BP2Q86UW6 1770 aaPredicted RBP12.6□□□□□ -0.39
PRKCH-213ENST00000555185 USP31Q70CQ4 1352 aa12.59□□□□□ -0.39
PRKCH-213ENST00000555185 MEGF6O75095 1541 aa12.59□□□□□ -0.39
PRKCH-213ENST00000555185 FAM208AQ9UK61 1670 aaKnown RBP12.59□□□□□ -0.39
PRKCH-213ENST00000555185 C4BP0C0L5 1744 aa12.59□□□□□ -0.39
PRKCH-213ENST00000555185 UBR3Q6ZT12 1888 aa12.59□□□□□ -0.39
PRKCH-213ENST00000555185 KIAA1551Q9HCM1 1747 aa12.57□□□□□ -0.4
PRKCH-213ENST00000555185 ZCRB1Q8TBF4 217 aaKnown RBP12.57□□□□□ -0.4
PRKCH-213ENST00000555185 SBNO2Q9Y2G9 1366 aa12.56□□□□□ -0.4
PRKCH-213ENST00000555185 FBLN1P23142 703 aa12.56□□□□□ -0.4
PRKCH-213ENST00000555185 AK7Q96M32 723 aa12.56□□□□□ -0.4
PRKCH-213ENST00000555185 BCS1LQ9Y276 419 aa12.56□□□□□ -0.4
PRKCH-213ENST00000555185 PALLDQ8WX93 1383 aa12.56□□□□□ -0.4
PRKCH-213ENST00000555185 PXDNLA1KZ92 1463 aa12.55□□□□□ -0.4
PRKCH-213ENST00000555185 CD163L1Q9NR16 1453 aa12.55□□□□□ -0.4
PRKCH-213ENST00000555185 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.55□□□□□ -0.4
PRKCH-213ENST00000555185 ARHGAP27Q6ZUM4 889 aa12.55□□□□□ -0.4
PRKCH-213ENST00000555185 C16orf71Q8IYS4 520 aaPredicted RBP12.55□□□□□ -0.4
PRKCH-213ENST00000555185 USHBP1Q8N6Y0 703 aa12.55□□□□□ -0.4
PRKCH-213ENST00000555185 FLAD1Q8NFF5 587 aa12.55□□□□□ -0.4
PRKCH-213ENST00000555185 RBM46Q8TBY0 533 aaKnown RBP12.55□□□□□ -0.4
PRKCH-213ENST00000555185 IP6K1Q92551 441 aa12.55□□□□□ -0.4
PRKCH-213ENST00000555185 MPRIPQ6WCQ1 1025 aa12.54□□□□□ -0.4
PRKCH-213ENST00000555185 ITGB4P16144 1822 aa12.53□□□□□ -0.4
PRKCH-213ENST00000555185 KCPQ6ZWJ8 1503 aa12.53□□□□□ -0.4
PRKCH-213ENST00000555185 A0A0G2JLW4 131 aa12.53□□□□□ -0.4
PRKCH-213ENST00000555185 HSPA1AP0DMV8 641 aaKnown RBP12.53□□□□□ -0.4
PRKCH-213ENST00000555185 HSPA1BP0DMV9 641 aaKnown RBP12.53□□□□□ -0.4
PRKCH-213ENST00000555185 KIF13BQ9NQT8 1826 aa12.53□□□□□ -0.4
PRKCH-213ENST00000555185 TMC1Q8TDI8 760 aa12.52□□□□□ -0.41
PRKCH-213ENST00000555185 PKD1L3Q7Z443 1732 aa12.51□□□□□ -0.41
PRKCH-213ENST00000555185 SLC34A2O95436 690 aa12.51□□□□□ -0.41
PRKCH-213ENST00000555185 HOXC9P31274 260 aa12.51□□□□□ -0.41
PRKCH-213ENST00000555185 C9orf131Q5VYM1 1079 aa12.51□□□□□ -0.41
PRKCH-213ENST00000555185 RRAGCQ9HB90 399 aa12.51□□□□□ -0.41
PRKCH-213ENST00000555185 MMP10P09238 476 aa12.5□□□□□ -0.41
PRKCH-213ENST00000555185 FSTL1Q12841 308 aa12.5□□□□□ -0.41
PRKCH-213ENST00000555185 NBPF6Q5VWK0 638 aa12.5□□□□□ -0.41
PRKCH-213ENST00000555185 LINC00116Q8NCU8 138 aa12.5□□□□□ -0.41
PRKCH-213ENST00000555185 NBPF4Q96M43 638 aa12.5□□□□□ -0.41
PRKCH-213ENST00000555185 SLC12A5Q9H2X9 1139 aa12.5□□□□□ -0.41
PRKCH-213ENST00000555185 MAP3K19Q56UN5 1328 aa12.5□□□□□ -0.41
PRKCH-213ENST00000555185 BRCA1P38398 1863 aaKnown RBP12.5□□□□□ -0.41
PRKCH-213ENST00000555185 MAP2P11137 1827 aaKnown RBP12.49□□□□□ -0.41
PRKCH-213ENST00000555185 FCHSD2O94868 740 aa12.49□□□□□ -0.41
PRKCH-213ENST00000555185 DPEP1P16444 411 aa12.49□□□□□ -0.41
PRKCH-213ENST00000555185 EDC4Q6P2E9 1401 aaKnown RBP12.48□□□□□ -0.41
PRKCH-213ENST00000555185 GNPATO15228 680 aa12.48□□□□□ -0.41
PRKCH-213ENST00000555185 AMPHP49418 695 aa12.48□□□□□ -0.41
PRKCH-213ENST00000555185 A0A1W2PP64 1363 aa12.47□□□□□ -0.41
PRKCH-213ENST00000555185 SSFA2P28290 1259 aa12.47□□□□□ -0.41
PRKCH-213ENST00000555185 HDGFL2Q7Z4V5 671 aaPredicted RBP12.47□□□□□ -0.41
PRKCH-213ENST00000555185 C10orf71Q711Q0 1435 aa12.46□□□□□ -0.41
PRKCH-213ENST00000555185 ARFGEF1Q9Y6D6 1849 aa12.46□□□□□ -0.41
PRKCH-213ENST00000555185 ROCK2O75116 1388 aaKnown RBP12.46□□□□□ -0.41
PRKCH-213ENST00000555185 ITPK1Q13572 414 aa12.46□□□□□ -0.41
PRKCH-213ENST00000555185 RAPGEF4Q8WZA2 1011 aa12.46□□□□□ -0.41
PRKCH-213ENST00000555185 PIGBQ92521 554 aa12.46□□□□□ -0.41
PRKCH-213ENST00000555185 L3MBTL2Q969R5 705 aa12.46□□□□□ -0.41
PRKCH-213ENST00000555185 RNF181Q9P0P0 153 aa12.46□□□□□ -0.41
PRKCH-213ENST00000555185 SBF1O95248 1867 aa12.46□□□□□ -0.42
PRKCH-213ENST00000555185 PLEKHG2Q9H7P9 1386 aa12.45□□□□□ -0.42
PRKCH-213ENST00000555185 TNRC6CQ9HCJ0 1690 aaKnown RBP12.45□□□□□ -0.42
PRKCH-213ENST00000555185 CYP27B1O15528 508 aa12.45□□□□□ -0.42
PRKCH-213ENST00000555185 TGFB2P61812 414 aa12.45□□□□□ -0.42
PRKCH-213ENST00000555185 RRS1Q15050 365 aaKnown RBP12.45□□□□□ -0.42
PRKCH-213ENST00000555185 NSD3Q9BZ95 1437 aa12.45□□□□□ -0.42
PRKCH-213ENST00000555185 KDM2BQ8NHM5 1336 aa12.44□□□□□ -0.42
PRKCH-213ENST00000555185 PCDH11XQ9BZA7 1347 aa12.44□□□□□ -0.42
PRKCH-213ENST00000555185 PCDH11YQ9BZA8 1340 aa12.44□□□□□ -0.42
PRKCH-213ENST00000555185 LOC102724428A0A0B4J2F2 783 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms