RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 AAMPQ13685 434 aa18.69■□□□□ 0.58
XRCC3-211ENST00000555055 PSME1Q06323 249 aa18.68■□□□□ 0.58
XRCC3-211ENST00000555055 HDAC1Q13547 482 aaPredicted RBP18.68■□□□□ 0.58
XRCC3-211ENST00000555055 RTF1Q92541 710 aaKnown RBP18.68■□□□□ 0.58
XRCC3-211ENST00000555055 SIRT2Q8IXJ6 389 aa18.67■□□□□ 0.58
XRCC3-211ENST00000555055 TSPYL4Q9UJ04 414 aa18.67■□□□□ 0.58
XRCC3-211ENST00000555055 PIK3R4Q99570 1358 aa18.67■□□□□ 0.58
XRCC3-211ENST00000555055 FAM43AQ8N2R8 423 aa18.67■□□□□ 0.58
XRCC3-211ENST00000555055 IGSF1Q8N6C5 1336 aa18.66■□□□□ 0.58
XRCC3-211ENST00000555055 G2E3Q7L622 706 aa18.66■□□□□ 0.58
XRCC3-211ENST00000555055 ANKRD45Q5TZF3 282 aa18.65■□□□□ 0.58
XRCC3-211ENST00000555055 SMC5Q8IY18 1101 aa18.65■□□□□ 0.58
XRCC3-211ENST00000555055 RGPD1P0DJD0 1748 aa18.65■□□□□ 0.58
XRCC3-211ENST00000555055 ABCC4O15439 1325 aa18.65■□□□□ 0.58
XRCC3-211ENST00000555055 F6X3S4 739 aa18.65■□□□□ 0.58
XRCC3-211ENST00000555055 SLC4A2P04920 1241 aa18.65■□□□□ 0.58
XRCC3-211ENST00000555055 LRRC59Q96AG4 307 aaKnown RBP18.65■□□□□ 0.58
XRCC3-211ENST00000555055 ARHGEF10O15013 1369 aa18.65■□□□□ 0.58
XRCC3-211ENST00000555055 CRB1P82279 1406 aa18.64■□□□□ 0.57
XRCC3-211ENST00000555055 ZNF428Q96B54 188 aa18.64■□□□□ 0.57
XRCC3-211ENST00000555055 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.64■□□□□ 0.57
XRCC3-211ENST00000555055 APBB1O00213 710 aa18.64■□□□□ 0.57
XRCC3-211ENST00000555055 BRPF1P55201 1214 aaPredicted RBP18.64■□□□□ 0.57
XRCC3-211ENST00000555055 DDX17Q92841 729 aaKnown RBP18.64■□□□□ 0.57
XRCC3-211ENST00000555055 FMN2Q9NZ56 1722 aa18.64■□□□□ 0.57
XRCC3-211ENST00000555055 MFAP1P55081 439 aaKnown RBP18.63■□□□□ 0.57
XRCC3-211ENST00000555055 SLC4A10Q6U841 1118 aa18.63■□□□□ 0.57
XRCC3-211ENST00000555055 ANKARQ7Z5J8 1434 aa18.62■□□□□ 0.57
XRCC3-211ENST00000555055 ARHGAP45Q92619 1136 aa18.62■□□□□ 0.57
XRCC3-211ENST00000555055 NBPF6Q5VWK0 638 aa18.61■□□□□ 0.57
XRCC3-211ENST00000555055 NBPF4Q96M43 638 aa18.61■□□□□ 0.57
XRCC3-211ENST00000555055 CHD2O14647 1828 aaKnown RBP18.61■□□□□ 0.57
XRCC3-211ENST00000555055 KDRP35968 1356 aa18.61■□□□□ 0.57
XRCC3-211ENST00000555055 MARF1Q9Y4F3 1742 aaKnown RBP18.61■□□□□ 0.57
XRCC3-211ENST00000555055 NUCB1Q02818 461 aa18.6■□□□□ 0.57
XRCC3-211ENST00000555055 CHD1LQ86WJ1 897 aa18.6■□□□□ 0.57
XRCC3-211ENST00000555055 IL17REQ8NFR9 667 aa18.6■□□□□ 0.57
XRCC3-211ENST00000555055 FRAT2O75474 233 aaPredicted RBP18.6■□□□□ 0.57
XRCC3-211ENST00000555055 API5Q9BZZ5 524 aaKnown RBP18.6■□□□□ 0.57
XRCC3-211ENST00000555055 SPRYD3Q8NCJ5 442 aa18.59■□□□□ 0.57
XRCC3-211ENST00000555055 NPHP4O75161 1426 aaPredicted RBP18.59■□□□□ 0.57
XRCC3-211ENST00000555055 MEIS3Q99687 375 aa18.59■□□□□ 0.57
XRCC3-211ENST00000555055 PROSER2Q86WR7 435 aaPredicted RBP18.58■□□□□ 0.57
XRCC3-211ENST00000555055 GAS2L2Q8NHY3 880 aa18.58■□□□□ 0.57
XRCC3-211ENST00000555055 MSH6P52701 1360 aa18.58■□□□□ 0.57
XRCC3-211ENST00000555055 GNAT3A8MTJ3 354 aa18.58■□□□□ 0.56
XRCC3-211ENST00000555055 RGS12O14924 1447 aa18.58■□□□□ 0.56
XRCC3-211ENST00000555055 SLKQ9H2G2 1235 aaPredicted RBP18.57■□□□□ 0.56
XRCC3-211ENST00000555055 C16orf71Q8IYS4 520 aaPredicted RBP18.56■□□□□ 0.56
XRCC3-211ENST00000555055 LGR6Q9HBX8 967 aa18.56■□□□□ 0.56
XRCC3-211ENST00000555055 ADAMTSL3P82987 1691 aa18.56■□□□□ 0.56
XRCC3-211ENST00000555055 ADGRL3Q9HAR2 1447 aa18.56■□□□□ 0.56
XRCC3-211ENST00000555055 NWD1Q149M9 1564 aa18.55■□□□□ 0.56
XRCC3-211ENST00000555055 BECN1Q14457 450 aa18.55■□□□□ 0.56
XRCC3-211ENST00000555055 HSPA2P54652 639 aa18.54■□□□□ 0.56
XRCC3-211ENST00000555055 SMARCA5O60264 1052 aaPredicted RBP18.54■□□□□ 0.56
XRCC3-211ENST00000555055 TBC1D32Q96NH3 1257 aa18.54■□□□□ 0.56
XRCC3-211ENST00000555055 UPF2Q9HAU5 1272 aaKnown RBP18.54■□□□□ 0.56
XRCC3-211ENST00000555055 GCP02774 474 aa18.53■□□□□ 0.56
XRCC3-211ENST00000555055 ZC3H6P61129 1189 aaKnown RBP18.53■□□□□ 0.56
XRCC3-211ENST00000555055 OTUD7AQ8TE49 926 aaPredicted RBP18.53■□□□□ 0.56
XRCC3-211ENST00000555055 IP6K1Q92551 441 aa18.53■□□□□ 0.56
XRCC3-211ENST00000555055 AXIN2Q9Y2T1 843 aa18.53■□□□□ 0.56
XRCC3-211ENST00000555055 KCNQ3O43525 872 aa18.53■□□□□ 0.56
XRCC3-211ENST00000555055 LTN1O94822 1766 aa18.53■□□□□ 0.56
XRCC3-211ENST00000555055 KIAA0232Q92628 1395 aa18.53■□□□□ 0.56
XRCC3-211ENST00000555055 INTS3Q68E01 1043 aaKnown RBP18.52■□□□□ 0.56
XRCC3-211ENST00000555055 EIF2S2P20042 333 aaKnown RBP18.52■□□□□ 0.56
XRCC3-211ENST00000555055 L1TD1Q5T7N2 865 aaKnown RBP18.52■□□□□ 0.56
XRCC3-211ENST00000555055 MPRIPQ6WCQ1 1025 aa18.52■□□□□ 0.56
XRCC3-211ENST00000555055 ZNF142P52746 1687 aaPredicted RBP18.51■□□□□ 0.55
XRCC3-211ENST00000555055 MAP3K5Q99683 1374 aa18.51■□□□□ 0.55
XRCC3-211ENST00000555055 ANXA1P04083 346 aa18.51■□□□□ 0.55
XRCC3-211ENST00000555055 FKBP5Q13451 457 aaPredicted RBP18.51■□□□□ 0.55
XRCC3-211ENST00000555055 RGPD2P0DJD1 1756 aa18.5■□□□□ 0.55
XRCC3-211ENST00000555055 CABLES1Q8TDN4 633 aa18.5■□□□□ 0.55
XRCC3-211ENST00000555055 C22orf23Q9BZE7 217 aa18.5■□□□□ 0.55
XRCC3-211ENST00000555055 CEP85Q6P2H3 762 aa18.49■□□□□ 0.55
XRCC3-211ENST00000555055 KRT28Q7Z3Y7 464 aa18.49■□□□□ 0.55
XRCC3-211ENST00000555055 GCC1Q96CN9 775 aa18.49■□□□□ 0.55
XRCC3-211ENST00000555055 PHAXQ9H814 394 aaKnown RBP18.49■□□□□ 0.55
XRCC3-211ENST00000555055 STK31Q9BXU1 1019 aa18.48■□□□□ 0.55
XRCC3-211ENST00000555055 FLIIQ13045 1269 aa18.48■□□□□ 0.55
XRCC3-211ENST00000555055 TAF7Q15545 349 aaPredicted RBP18.48■□□□□ 0.55
XRCC3-211ENST00000555055 TBC1D2Q9BYX2 928 aa18.48■□□□□ 0.55
XRCC3-211ENST00000555055 NFAT5O94916 1531 aa18.48■□□□□ 0.55
XRCC3-211ENST00000555055 RTL1A6NKG5 1358 aa18.48■□□□□ 0.55
XRCC3-211ENST00000555055 ATP10DQ9P241 1426 aa18.47■□□□□ 0.55
XRCC3-211ENST00000555055 ZNF530Q6P9A1 599 aaPredicted RBP18.47■□□□□ 0.55
XRCC3-211ENST00000555055 ANKRD24Q8TF21 1146 aa18.46■□□□□ 0.55
XRCC3-211ENST00000555055 PTPRCP08575 1304 aa18.46■□□□□ 0.55
XRCC3-211ENST00000555055 CHMP4BQ9H444 224 aaKnown RBP18.46■□□□□ 0.55
XRCC3-211ENST00000555055 ANTXR1Q9H6X2 564 aa18.46■□□□□ 0.55
XRCC3-211ENST00000555055 GSPT1P15170 499 aaKnown RBP18.45■□□□□ 0.54
XRCC3-211ENST00000555055 ARHGEF25Q86VW2 580 aa18.45■□□□□ 0.54
XRCC3-211ENST00000555055 KCNH5Q8NCM2 988 aa18.45■□□□□ 0.54
XRCC3-211ENST00000555055 HAP1P54257 671 aaPredicted RBP18.45■□□□□ 0.54
XRCC3-211ENST00000555055 HDGFL1Q5TGJ6 251 aa18.45■□□□□ 0.54
XRCC3-211ENST00000555055 TSHZ3Q63HK5 1081 aa18.45■□□□□ 0.54
XRCC3-211ENST00000555055 ANKRD44Q8N8A2 993 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms