RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 PLXNC1O60486 1568 aa7.77□□□□□ -1.17
ATXN3-229ENST00000554672 ST8SIA5O15466 376 aa7.77□□□□□ -1.17
ATXN3-229ENST00000554672 ZBTB24O43167 697 aaPredicted RBP7.77□□□□□ -1.17
ATXN3-229ENST00000554672 FDX1P10109 184 aa7.77□□□□□ -1.17
ATXN3-229ENST00000554672 NDUFV2P19404 249 aa7.77□□□□□ -1.17
ATXN3-229ENST00000554672 FAM135AQ9P2D6 1515 aa7.77□□□□□ -1.17
ATXN3-229ENST00000554672 ZNF142P52746 1687 aaPredicted RBP7.76□□□□□ -1.17
ATXN3-229ENST00000554672 CLTCQ00610 1675 aaKnown RBP7.76□□□□□ -1.17
ATXN3-229ENST00000554672 PZPP20742 1482 aa7.76□□□□□ -1.17
ATXN3-229ENST00000554672 NLRP1Q9C000 1473 aa7.76□□□□□ -1.17
ATXN3-229ENST00000554672 MOXD2PA6NHM9 499 aa7.76□□□□□ -1.17
ATXN3-229ENST00000554672 TRIM66O15016 1216 aa7.76□□□□□ -1.17
ATXN3-229ENST00000554672 TSPY4P0CV99 314 aa7.76□□□□□ -1.17
ATXN3-229ENST00000554672 TSPY10P0CW01 314 aa7.76□□□□□ -1.17
ATXN3-229ENST00000554672 TTLL12Q14166 644 aaPredicted RBP7.76□□□□□ -1.17
ATXN3-229ENST00000554672 TXNDC2Q86VQ3 553 aa7.76□□□□□ -1.17
ATXN3-229ENST00000554672 AAASQ9NRG9 546 aa7.76□□□□□ -1.17
ATXN3-229ENST00000554672 LRRC7Q96NW7 1537 aa7.76□□□□□ -1.17
ATXN3-229ENST00000554672 VWDEQ8N2E2 1590 aa7.76□□□□□ -1.17
ATXN3-229ENST00000554672 MBD5Q9P267 1494 aa7.75□□□□□ -1.17
ATXN3-229ENST00000554672 SUPT6HQ7KZ85 1726 aaKnown RBP7.75□□□□□ -1.17
ATXN3-229ENST00000554672 MTUS2Q5JR59 1369 aa7.75□□□□□ -1.17
ATXN3-229ENST00000554672 WNT7AO00755 349 aa7.75□□□□□ -1.17
ATXN3-229ENST00000554672 JUNDP17535 347 aa7.75□□□□□ -1.17
ATXN3-229ENST00000554672 RETREG3Q86VR2 466 aa7.75□□□□□ -1.17
ATXN3-229ENST00000554672 PARP9Q8IXQ6 854 aa7.75□□□□□ -1.17
ATXN3-229ENST00000554672 CCDC24Q8N4L8 307 aa7.75□□□□□ -1.17
ATXN3-229ENST00000554672 FAM135BQ49AJ0 1406 aa7.75□□□□□ -1.17
ATXN3-229ENST00000554672 NEURL4Q96JN8 1562 aa7.75□□□□□ -1.17
ATXN3-229ENST00000554672 AVPP01185 164 aa7.74□□□□□ -1.17
ATXN3-229ENST00000554672 SKOR1P84550 965 aa7.74□□□□□ -1.17
ATXN3-229ENST00000554672 PTCRAQ6ISU1 281 aaPredicted RBP7.74□□□□□ -1.17
ATXN3-229ENST00000554672 CYP4X1Q8N118 509 aa7.74□□□□□ -1.17
ATXN3-229ENST00000554672 BEGAINQ9BUH8 593 aa7.74□□□□□ -1.17
ATXN3-229ENST00000554672 DACH1Q9UI36 760 aa7.74□□□□□ -1.17
ATXN3-229ENST00000554672 ALKQ9UM73 1620 aa7.74□□□□□ -1.17
ATXN3-229ENST00000554672 UGGT1Q9NYU2 1555 aa7.73□□□□□ -1.17
ATXN3-229ENST00000554672 MS4A1P11836 297 aa7.73□□□□□ -1.17
ATXN3-229ENST00000554672 LTKP29376 864 aa7.73□□□□□ -1.17
ATXN3-229ENST00000554672 MRGPRX2Q96LB1 330 aa7.73□□□□□ -1.17
ATXN3-229ENST00000554672 EID1Q9Y6B2 187 aa7.73□□□□□ -1.17
ATXN3-229ENST00000554672 FYCO1Q9BQS8 1478 aa7.73□□□□□ -1.17
ATXN3-229ENST00000554672 INO80Q9ULG1 1556 aaPredicted RBP7.72□□□□□ -1.17
ATXN3-229ENST00000554672 C6orf229H3BNL8 230 aa7.72□□□□□ -1.17
ATXN3-229ENST00000554672 SMPD1P17405 629 aa7.72□□□□□ -1.17
ATXN3-229ENST00000554672 CRIPAKQ8N1N5 446 aa7.72□□□□□ -1.17
ATXN3-229ENST00000554672 ZNF775Q96BV0 537 aaPredicted RBP7.72□□□□□ -1.17
ATXN3-229ENST00000554672 AK7Q96M32 723 aa7.72□□□□□ -1.17
ATXN3-229ENST00000554672 CDC42BPAQ5VT25 1732 aa7.72□□□□□ -1.17
ATXN3-229ENST00000554672 KCNA6P17658 529 aa7.71□□□□□ -1.18
ATXN3-229ENST00000554672 PROSER2Q86WR7 435 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-229ENST00000554672 KDM5DQ9BY66 1539 aa7.71□□□□□ -1.18
ATXN3-229ENST00000554672 TTC24A2A3L6 582 aaPredicted RBP7.7□□□□□ -1.18
ATXN3-229ENST00000554672 J3QL48 77 aa7.7□□□□□ -1.18
ATXN3-229ENST00000554672 RC3H1Q5TC82 1133 aaKnown RBP7.7□□□□□ -1.18
ATXN3-229ENST00000554672 SNIP1Q8TAD8 396 aaKnown RBP7.7□□□□□ -1.18
ATXN3-229ENST00000554672 NUDT12Q9BQG2 462 aa7.7□□□□□ -1.18
ATXN3-229ENST00000554672 TBC1D2Q9BYX2 928 aa7.7□□□□□ -1.18
ATXN3-229ENST00000554672 PCDHB15Q9Y5E8 787 aa7.7□□□□□ -1.18
ATXN3-229ENST00000554672 DEPDC5O75140 1603 aa7.7□□□□□ -1.18
ATXN3-229ENST00000554672 TMEM94Q12767 1356 aa7.69□□□□□ -1.18
ATXN3-229ENST00000554672 LRRIQ1Q96JM4 1722 aa7.69□□□□□ -1.18
ATXN3-229ENST00000554672 CCDC141Q6ZP82 1450 aa7.68□□□□□ -1.18
ATXN3-229ENST00000554672 ADGBQ8N7X0 1667 aa7.68□□□□□ -1.18
ATXN3-229ENST00000554672 SMCPP49901 116 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-229ENST00000554672 WNT7BP56706 349 aa7.68□□□□□ -1.18
ATXN3-229ENST00000554672 ZNF772Q68DY9 489 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-229ENST00000554672 RSBN1LQ6PCB5 846 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-229ENST00000554672 PRR7Q8TB68 274 aa7.68□□□□□ -1.18
ATXN3-229ENST00000554672 SLAIN2Q9P270 581 aa7.68□□□□□ -1.18
ATXN3-229ENST00000554672 CEP162Q5TB80 1403 aa7.68□□□□□ -1.18
ATXN3-229ENST00000554672 SCAF11Q99590 1463 aaKnown RBP7.68□□□□□ -1.18
ATXN3-229ENST00000554672 AXIN1O15169 862 aa7.67□□□□□ -1.18
ATXN3-229ENST00000554672 JCADQ9P266 1359 aa7.67□□□□□ -1.18
ATXN3-229ENST00000554672 SPTLC1O15269 473 aa7.66□□□□□ -1.18
ATXN3-229ENST00000554672 CCNYL3P0C7X3 344 aa7.66□□□□□ -1.18
ATXN3-229ENST00000554672 GJA5P36382 358 aa7.66□□□□□ -1.18
ATXN3-229ENST00000554672 PDE4DQ08499 809 aa7.66□□□□□ -1.18
ATXN3-229ENST00000554672 MTMR2Q13614 643 aa7.66□□□□□ -1.18
ATXN3-229ENST00000554672 PTPRNQ16849 979 aa7.66□□□□□ -1.18
ATXN3-229ENST00000554672 SLC26A8Q96RN1 970 aa7.66□□□□□ -1.18
ATXN3-229ENST00000554672 SLC24A3Q9HC58 644 aa7.66□□□□□ -1.18
ATXN3-229ENST00000554672 EVA1BQ9NVM1 165 aa7.66□□□□□ -1.18
ATXN3-229ENST00000554672 TMEM2Q9UHN6 1383 aa7.66□□□□□ -1.18
ATXN3-229ENST00000554672 ERVK-7P63135 1459 aa7.66□□□□□ -1.18
ATXN3-229ENST00000554672 RNF17Q9BXT8 1623 aaKnown RBP7.66□□□□□ -1.18
ATXN3-229ENST00000554672 POLR1AO95602 1720 aaPredicted RBP7.66□□□□□ -1.18
ATXN3-229ENST00000554672 SIAH2O43255 324 aa7.65□□□□□ -1.18
ATXN3-229ENST00000554672 RXRBP28702 533 aa7.65□□□□□ -1.18
ATXN3-229ENST00000554672 IQGAP1P46940 1657 aa7.65□□□□□ -1.18
ATXN3-229ENST00000554672 NCOA2Q15596 1464 aa7.65□□□□□ -1.18
ATXN3-229ENST00000554672 CTC1Q2NKJ3 1217 aa7.65□□□□□ -1.18
ATXN3-229ENST00000554672 MEX3CQ5U5Q3 659 aaKnown RBP7.65□□□□□ -1.18
ATXN3-229ENST00000554672 DESI1Q6ICB0 168 aa7.65□□□□□ -1.18
ATXN3-229ENST00000554672 HPS1Q92902 700 aa7.65□□□□□ -1.18
ATXN3-229ENST00000554672 ARHGAP23Q9P227 1491 aa7.65□□□□□ -1.18
ATXN3-229ENST00000554672 GMPR2Q9P2T1 348 aaKnown RBP7.65□□□□□ -1.18
ATXN3-229ENST00000554672 SYNMO15061 1565 aa7.64□□□□□ -1.19
ATXN3-229ENST00000554672 MSH6P52701 1360 aa7.64□□□□□ -1.19
ATXN3-229ENST00000554672 SPATA31A6Q5VVP1 1343 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms