RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 MTHFSDQ2M296 383 aaKnown RBP19.51■□□□□ 0.71
ARHGEF40-203ENST00000554514 NECTIN2Q92692 538 aa19.51■□□□□ 0.71
ARHGEF40-203ENST00000554514 TSPYL4Q9UJ04 414 aa19.51■□□□□ 0.71
ARHGEF40-203ENST00000554514 PLEKHG3A1L390 1219 aa19.5■□□□□ 0.71
ARHGEF40-203ENST00000554514 KIF2CQ99661 725 aa19.5■□□□□ 0.71
ARHGEF40-203ENST00000554514 EID1Q9Y6B2 187 aa19.5■□□□□ 0.71
ARHGEF40-203ENST00000554514 EIF5BO60841 1220 aaKnown RBP19.5■□□□□ 0.71
ARHGEF40-203ENST00000554514 CDC45O75419 566 aa19.5■□□□□ 0.71
ARHGEF40-203ENST00000554514 INTS3Q68E01 1043 aaKnown RBP19.5■□□□□ 0.71
ARHGEF40-203ENST00000554514 OVOS2A0A0J9YW53 1432 aa19.5■□□□□ 0.71
ARHGEF40-203ENST00000554514 OVOS2Q6IE36 1432 aa19.5■□□□□ 0.71
ARHGEF40-203ENST00000554514 UBR1Q8IWV7 1749 aa19.5■□□□□ 0.71
ARHGEF40-203ENST00000554514 DCTPP1Q9H773 170 aa19.49■□□□□ 0.71
ARHGEF40-203ENST00000554514 TRAK2O60296 914 aa19.49■□□□□ 0.71
ARHGEF40-203ENST00000554514 G2E3Q7L622 706 aa19.49■□□□□ 0.71
ARHGEF40-203ENST00000554514 PTPRUQ92729 1446 aa19.49■□□□□ 0.71
ARHGEF40-203ENST00000554514 LTV1Q96GA3 475 aaPredicted RBP19.48■□□□□ 0.71
ARHGEF40-203ENST00000554514 CEP85Q6P2H3 762 aa19.48■□□□□ 0.71
ARHGEF40-203ENST00000554514 PEAK1Q9H792 1746 aa19.47■□□□□ 0.71
ARHGEF40-203ENST00000554514 ANKRD44Q8N8A2 993 aa19.47■□□□□ 0.71
ARHGEF40-203ENST00000554514 SNX21Q969T3 373 aa19.47■□□□□ 0.71
ARHGEF40-203ENST00000554514 HAP1P54257 671 aaPredicted RBP19.46■□□□□ 0.71
ARHGEF40-203ENST00000554514 C14orf37Q86TY3 774 aa19.46■□□□□ 0.71
ARHGEF40-203ENST00000554514 PLEKHG1Q9ULL1 1385 aa19.46■□□□□ 0.71
ARHGEF40-203ENST00000554514 RGS12O14924 1447 aa19.46■□□□□ 0.71
ARHGEF40-203ENST00000554514 KIF13AQ9H1H9 1805 aa19.46■□□□□ 0.71
ARHGEF40-203ENST00000554514 TNPO1Q92973 898 aaKnown RBP19.45■□□□□ 0.7
ARHGEF40-203ENST00000554514 NRKQ7Z2Y5 1582 aa19.45■□□□□ 0.7
ARHGEF40-203ENST00000554514 RIMS1Q86UR5 1692 aaKnown RBP19.45■□□□□ 0.7
ARHGEF40-203ENST00000554514 NLRP6P59044 892 aa19.45■□□□□ 0.7
ARHGEF40-203ENST00000554514 TTC22Q5TAA0 569 aa19.45■□□□□ 0.7
ARHGEF40-203ENST00000554514 EYA1Q99502 592 aa19.45■□□□□ 0.7
ARHGEF40-203ENST00000554514 GOLGA6L3A6NEY3 463 aa19.44■□□□□ 0.7
ARHGEF40-203ENST00000554514 RTL1A6NKG5 1358 aa19.44■□□□□ 0.7
ARHGEF40-203ENST00000554514 L1TD1Q5T7N2 865 aaKnown RBP19.44■□□□□ 0.7
ARHGEF40-203ENST00000554514 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.44■□□□□ 0.7
ARHGEF40-203ENST00000554514 ATP10DQ9P241 1426 aa19.43■□□□□ 0.7
ARHGEF40-203ENST00000554514 K7ELQ4 463 aaPredicted RBP19.43■□□□□ 0.7
ARHGEF40-203ENST00000554514 PLEKHG5O94827 1062 aa19.43■□□□□ 0.7
ARHGEF40-203ENST00000554514 RPAP2Q8IXW5 612 aaPredicted RBP19.43■□□□□ 0.7
ARHGEF40-203ENST00000554514 CRB1P82279 1406 aa19.43■□□□□ 0.7
ARHGEF40-203ENST00000554514 PTPRCP08575 1304 aa19.42■□□□□ 0.7
ARHGEF40-203ENST00000554514 KIAA0232Q92628 1395 aa19.42■□□□□ 0.7
ARHGEF40-203ENST00000554514 GAS2L2Q8NHY3 880 aa19.41■□□□□ 0.7
ARHGEF40-203ENST00000554514 SDSP20132 328 aa19.41■□□□□ 0.7
ARHGEF40-203ENST00000554514 KIF24Q5T7B8 1368 aa19.41■□□□□ 0.7
ARHGEF40-203ENST00000554514 USP31Q70CQ4 1352 aa19.41■□□□□ 0.7
ARHGEF40-203ENST00000554514 DDX11L8A8MPP1 907 aa19.41■□□□□ 0.7
ARHGEF40-203ENST00000554514 DDIT3P35638 169 aa19.41■□□□□ 0.7
ARHGEF40-203ENST00000554514 TSHZ3Q63HK5 1081 aa19.41■□□□□ 0.7
ARHGEF40-203ENST00000554514 PANK2Q9BZ23 570 aa19.41■□□□□ 0.7
ARHGEF40-203ENST00000554514 FLT4P35916 1363 aa19.41■□□□□ 0.7
ARHGEF40-203ENST00000554514 NCOA3Q9Y6Q9 1424 aa19.4■□□□□ 0.7
ARHGEF40-203ENST00000554514 ZBTB7CA1YPR0 619 aa19.4■□□□□ 0.7
ARHGEF40-203ENST00000554514 XRCC6P12956 609 aaKnown RBP eCLIP19.4■□□□□ 0.7
ARHGEF40-203ENST00000554514 RBM33Q96EV2 1170 aaKnown RBP19.4■□□□□ 0.7
ARHGEF40-203ENST00000554514 ARHGEF10O15013 1369 aa19.39■□□□□ 0.7
ARHGEF40-203ENST00000554514 USHBP1Q8N6Y0 703 aa19.39■□□□□ 0.7
ARHGEF40-203ENST00000554514 STK31Q9BXU1 1019 aa19.39■□□□□ 0.7
ARHGEF40-203ENST00000554514 EXOC6BQ9Y2D4 811 aa19.39■□□□□ 0.7
ARHGEF40-203ENST00000554514 TOPAZ1Q8N9V7 1692 aa19.39■□□□□ 0.69
ARHGEF40-203ENST00000554514 TTC21AQ8NDW8 1320 aa19.39■□□□□ 0.69
ARHGEF40-203ENST00000554514 SBNO1A3KN83 1393 aa19.39■□□□□ 0.69
ARHGEF40-203ENST00000554514 FKBP5Q13451 457 aaPredicted RBP19.38■□□□□ 0.69
ARHGEF40-203ENST00000554514 CEP170BQ9Y4F5 1589 aaPredicted RBP19.38■□□□□ 0.69
ARHGEF40-203ENST00000554514 SSFA2P28290 1259 aa19.38■□□□□ 0.69
ARHGEF40-203ENST00000554514 RGPD8O14715 1765 aaPredicted RBP19.37■□□□□ 0.69
ARHGEF40-203ENST00000554514 RAB3GAP1Q15042 981 aa19.37■□□□□ 0.69
ARHGEF40-203ENST00000554514 GBP4Q96PP9 640 aa19.37■□□□□ 0.69
ARHGEF40-203ENST00000554514 SSH2Q76I76 1423 aa19.36■□□□□ 0.69
ARHGEF40-203ENST00000554514 ABTB2Q8N961 1025 aa19.36■□□□□ 0.69
ARHGEF40-203ENST00000554514 HMMRO75330 724 aa19.36■□□□□ 0.69
ARHGEF40-203ENST00000554514 CASC1Q6TDU7 716 aa19.36■□□□□ 0.69
ARHGEF40-203ENST00000554514 KCNA6P17658 529 aa19.35■□□□□ 0.69
ARHGEF40-203ENST00000554514 USP26Q9BXU7 913 aa19.35■□□□□ 0.69
ARHGEF40-203ENST00000554514 CIZ1Q9ULV3 898 aaPredicted RBP19.35■□□□□ 0.69
ARHGEF40-203ENST00000554514 TBX22Q9Y458 520 aa19.35■□□□□ 0.69
ARHGEF40-203ENST00000554514 IGSF1Q8N6C5 1336 aa19.35■□□□□ 0.69
ARHGEF40-203ENST00000554514 RGPD1P0DJD0 1748 aa19.34■□□□□ 0.69
ARHGEF40-203ENST00000554514 CCT4P50991 539 aaKnown RBP19.34■□□□□ 0.69
ARHGEF40-203ENST00000554514 NALCNQ8IZF0 1738 aa19.34■□□□□ 0.69
ARHGEF40-203ENST00000554514 GNAT3A8MTJ3 354 aa19.34■□□□□ 0.69
ARHGEF40-203ENST00000554514 FLIIQ13045 1269 aa19.34■□□□□ 0.69
ARHGEF40-203ENST00000554514 GNAI2P04899 355 aa19.33■□□□□ 0.69
ARHGEF40-203ENST00000554514 HOXC9P31274 260 aa19.33■□□□□ 0.69
ARHGEF40-203ENST00000554514 FSD2A1L4K1 749 aa19.33■□□□□ 0.68
ARHGEF40-203ENST00000554514 RABEP1Q15276 862 aa19.33■□□□□ 0.68
ARHGEF40-203ENST00000554514 UBE2Q2Q8WVN8 375 aa19.32■□□□□ 0.68
ARHGEF40-203ENST00000554514 DIP2AQ14689 1571 aa19.32■□□□□ 0.68
ARHGEF40-203ENST00000554514 THEMISQ8N1K5 641 aaPredicted RBP19.31■□□□□ 0.68
ARHGEF40-203ENST00000554514 AK9Q5TCS8 1911 aa19.31■□□□□ 0.68
ARHGEF40-203ENST00000554514 FMN2Q9NZ56 1722 aa19.31■□□□□ 0.68
ARHGEF40-203ENST00000554514 PNMA6EA0A0J9YXQ4 647 aa19.31■□□□□ 0.68
ARHGEF40-203ENST00000554514 PDE1AP54750 535 aa19.31■□□□□ 0.68
ARHGEF40-203ENST00000554514 CCDC30Q5VVM6 783 aa19.31■□□□□ 0.68
ARHGEF40-203ENST00000554514 FAM43AQ8N2R8 423 aa19.31■□□□□ 0.68
ARHGEF40-203ENST00000554514 IL17REQ8NFR9 667 aa19.31■□□□□ 0.68
ARHGEF40-203ENST00000554514 KDRP35968 1356 aa19.3■□□□□ 0.68
ARHGEF40-203ENST00000554514 EIF2S2P20042 333 aaKnown RBP19.29■□□□□ 0.68
ARHGEF40-203ENST00000554514 RILPL2Q969X0 211 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms