RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 SPDYE1Q8NFV5 336 aaPredicted RBP10.4□□□□□ -0.74
LINC00640-201ENST00000554409 NLRP2Q9NX02 1062 aa10.4□□□□□ -0.74
LINC00640-201ENST00000554409 INSRP06213 1382 aa10.39□□□□□ -0.75
LINC00640-201ENST00000554409 FLT4P35916 1363 aa10.39□□□□□ -0.75
LINC00640-201ENST00000554409 PARD3Q8TEW0 1356 aa10.39□□□□□ -0.75
LINC00640-201ENST00000554409 NUP188Q5SRE5 1749 aa10.39□□□□□ -0.75
LINC00640-201ENST00000554409 SHANK3Q9BYB0 1731 aa10.39□□□□□ -0.75
LINC00640-201ENST00000554409 NHSQ6T4R5 1651 aa10.39□□□□□ -0.75
LINC00640-201ENST00000554409 TRIM37O94972 964 aa10.39□□□□□ -0.75
LINC00640-201ENST00000554409 IL2RBP14784 551 aa10.39□□□□□ -0.75
LINC00640-201ENST00000554409 FBLN1P23142 703 aa10.39□□□□□ -0.75
LINC00640-201ENST00000554409 AMPHP49418 695 aa10.39□□□□□ -0.75
LINC00640-201ENST00000554409 RRS1Q15050 365 aaKnown RBP10.39□□□□□ -0.75
LINC00640-201ENST00000554409 POLR3GLQ9BT43 218 aa10.39□□□□□ -0.75
LINC00640-201ENST00000554409 SMG6Q86US8 1419 aaKnown RBP10.39□□□□□ -0.75
LINC00640-201ENST00000554409 NSD2O96028 1365 aa10.39□□□□□ -0.75
LINC00640-201ENST00000554409 EXOC5O00471 708 aa10.38□□□□□ -0.75
LINC00640-201ENST00000554409 CHRDL2Q6WN34 429 aa10.38□□□□□ -0.75
LINC00640-201ENST00000554409 MARCH10Q8NA82 808 aaPredicted RBP10.38□□□□□ -0.75
LINC00640-201ENST00000554409 KIF7Q2M1P5 1343 aa10.37□□□□□ -0.75
LINC00640-201ENST00000554409 EN1Q05925 392 aaPredicted RBP10.37□□□□□ -0.75
LINC00640-201ENST00000554409 CAMKK2Q96RR4 588 aa10.37□□□□□ -0.75
LINC00640-201ENST00000554409 PANK3Q9H999 370 aa10.37□□□□□ -0.75
LINC00640-201ENST00000554409 CLEC11AQ9Y240 323 aa10.37□□□□□ -0.75
LINC00640-201ENST00000554409 NCAPD2Q15021 1401 aa10.36□□□□□ -0.75
LINC00640-201ENST00000554409 APBA3O96018 575 aa10.36□□□□□ -0.75
LINC00640-201ENST00000554409 LTV1Q96GA3 475 aaPredicted RBP10.36□□□□□ -0.75
LINC00640-201ENST00000554409 MEGF6O75095 1541 aa10.36□□□□□ -0.75
LINC00640-201ENST00000554409 PITPNM1O00562 1244 aa10.35□□□□□ -0.75
LINC00640-201ENST00000554409 EZH2Q15910 746 aaKnown RBP10.35□□□□□ -0.75
LINC00640-201ENST00000554409 BCL11BQ9C0K0 894 aaPredicted RBP10.35□□□□□ -0.75
LINC00640-201ENST00000554409 EMILIN1Q9Y6C2 1016 aa10.35□□□□□ -0.75
LINC00640-201ENST00000554409 PKD1L3Q7Z443 1732 aa10.35□□□□□ -0.75
LINC00640-201ENST00000554409 WASHC2AQ641Q2 1341 aa10.34□□□□□ -0.75
LINC00640-201ENST00000554409 LRP5O75197 1615 aa10.34□□□□□ -0.75
LINC00640-201ENST00000554409 PLSCR1O15162 318 aa10.34□□□□□ -0.75
LINC00640-201ENST00000554409 FKBP8Q14318 412 aa10.34□□□□□ -0.75
LINC00640-201ENST00000554409 HSP90AB2PQ58FF8 381 aa10.34□□□□□ -0.75
LINC00640-201ENST00000554409 NBPF6Q5VWK0 638 aa10.34□□□□□ -0.75
LINC00640-201ENST00000554409 NBPF4Q96M43 638 aa10.34□□□□□ -0.75
LINC00640-201ENST00000554409 BTAF1O14981 1849 aa10.34□□□□□ -0.75
LINC00640-201ENST00000554409 DOT1LQ8TEK3 1739 aa10.33□□□□□ -0.76
LINC00640-201ENST00000554409 POLKQ9UBT6 870 aa10.33□□□□□ -0.76
LINC00640-201ENST00000554409 KNSTRNQ9Y448 316 aa10.32□□□□□ -0.76
LINC00640-201ENST00000554409 PLEKHG2Q9H7P9 1386 aa10.31□□□□□ -0.76
LINC00640-201ENST00000554409 AMER1Q5JTC6 1135 aaPredicted RBP10.31□□□□□ -0.76
LINC00640-201ENST00000554409 PTF1AQ7RTS3 328 aa10.31□□□□□ -0.76
LINC00640-201ENST00000554409 PPM1GO15355 546 aaPredicted RBP10.3□□□□□ -0.76
LINC00640-201ENST00000554409 PER1O15534 1290 aaPredicted RBP10.3□□□□□ -0.76
LINC00640-201ENST00000554409 USHBP1Q8N6Y0 703 aa10.3□□□□□ -0.76
LINC00640-201ENST00000554409 ZCRB1Q8TBF4 217 aaKnown RBP10.3□□□□□ -0.76
LINC00640-201ENST00000554409 RAPGEF4Q8WZA2 1011 aa10.3□□□□□ -0.76
LINC00640-201ENST00000554409 PAPPAQ13219 1627 aa10.29□□□□□ -0.76
LINC00640-201ENST00000554409 NPC1L1Q9UHC9 1359 aa10.29□□□□□ -0.76
LINC00640-201ENST00000554409 KCNQ2O43526 872 aa10.29□□□□□ -0.76
LINC00640-201ENST00000554409 TATP17735 454 aaPredicted RBP10.29□□□□□ -0.76
LINC00640-201ENST00000554409 TNNT2P45379 298 aaPredicted RBP10.29□□□□□ -0.76
LINC00640-201ENST00000554409 MORC1Q86VD1 984 aa10.29□□□□□ -0.76
LINC00640-201ENST00000554409 PCDH11XQ9BZA7 1347 aa10.29□□□□□ -0.76
LINC00640-201ENST00000554409 PCDH11YQ9BZA8 1340 aa10.29□□□□□ -0.76
LINC00640-201ENST00000554409 LY75O60449 1722 aa10.28□□□□□ -0.76
LINC00640-201ENST00000554409 TOGARAM1Q9Y4F4 1720 aa10.28□□□□□ -0.76
LINC00640-201ENST00000554409 EIF4A2Q14240 407 aaKnown RBP10.28□□□□□ -0.76
LINC00640-201ENST00000554409 DDX54Q8TDD1 881 aaKnown RBP10.28□□□□□ -0.76
LINC00640-201ENST00000554409 ACSBG1Q96GR2 724 aa10.28□□□□□ -0.76
LINC00640-201ENST00000554409 EYA1Q99502 592 aa10.28□□□□□ -0.76
LINC00640-201ENST00000554409 CASZ1Q86V15 1759 aa10.27□□□□□ -0.77
LINC00640-201ENST00000554409 PSDA5PKW4 1024 aaPredicted RBP10.27□□□□□ -0.77
LINC00640-201ENST00000554409 R3HDM1Q15032 1099 aaKnown RBP10.27□□□□□ -0.77
LINC00640-201ENST00000554409 NBPF14Q5TI25 921 aa10.27□□□□□ -0.77
LINC00640-201ENST00000554409 PROM2Q8N271 834 aa10.27□□□□□ -0.77
LINC00640-201ENST00000554409 ITGB4P16144 1822 aa10.27□□□□□ -0.77
LINC00640-201ENST00000554409 IGSF1Q8N6C5 1336 aa10.27□□□□□ -0.77
LINC00640-201ENST00000554409 KAT6BQ8WYB5 2073 aa10.26□□□□□ -0.77
LINC00640-201ENST00000554409 TXNRD1Q16881 649 aa10.26□□□□□ -0.77
LINC00640-201ENST00000554409 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.26□□□□□ -0.77
LINC00640-201ENST00000554409 QSER1Q2KHR3 1735 aa10.26□□□□□ -0.77
LINC00640-201ENST00000554409 PRR29P0C7W0 189 aa10.25□□□□□ -0.77
LINC00640-201ENST00000554409 CYP27B1O15528 508 aa10.24□□□□□ -0.77
LINC00640-201ENST00000554409 NKX1-1Q15270 411 aaPredicted RBP10.24□□□□□ -0.77
LINC00640-201ENST00000554409 SPG7Q9UQ90 795 aa10.24□□□□□ -0.77
LINC00640-201ENST00000554409 KDRP35968 1356 aa10.24□□□□□ -0.77
LINC00640-201ENST00000554409 PRIM1P49642 420 aaKnown RBP10.23□□□□□ -0.77
LINC00640-201ENST00000554409 ANO8Q9HCE9 1232 aaPredicted RBP10.23□□□□□ -0.77
LINC00640-201ENST00000554409 C5P01031 1676 aa10.22□□□□□ -0.77
LINC00640-201ENST00000554409 TAF1LQ8IZX4 1826 aa10.22□□□□□ -0.77
LINC00640-201ENST00000554409 TUBGCP6Q96RT7 1819 aa10.22□□□□□ -0.77
LINC00640-201ENST00000554409 IL13P35225 146 aa10.22□□□□□ -0.77
LINC00640-201ENST00000554409 SLC27A3Q5K4L6 730 aa10.22□□□□□ -0.77
LINC00640-201ENST00000554409 CC2D1BQ5T0F9 858 aaKnown RBP10.22□□□□□ -0.77
LINC00640-201ENST00000554409 SYTL4Q96C24 671 aaPredicted RBP10.22□□□□□ -0.77
LINC00640-201ENST00000554409 COL3A1P02461 1466 aaPredicted RBP10.22□□□□□ -0.77
LINC00640-201ENST00000554409 MTHFSP49914 203 aa10.21□□□□□ -0.77
LINC00640-201ENST00000554409 SLC15A2Q16348 729 aa10.21□□□□□ -0.77
LINC00640-201ENST00000554409 STK32BQ9NY57 414 aa10.21□□□□□ -0.77
LINC00640-201ENST00000554409 PHKG2P15735 406 aa10.2□□□□□ -0.78
LINC00640-201ENST00000554409 IFNL2Q8IZJ0 200 aa10.2□□□□□ -0.78
LINC00640-201ENST00000554409 LRRC4BQ9NT99 713 aa10.2□□□□□ -0.78
LINC00640-201ENST00000554409 VIRMAQ69YN4 1812 aaKnown RBP10.19□□□□□ -0.78
LINC00640-201ENST00000554409 SCN11AQ9UI33 1791 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms