RNA–Protein interactions for RNA: ENST00000553884.5

RBM23-209, Transcript of RNA binding motif protein 23, human

TSL 3

Gene RBM23, Length 808 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM23-209	ENST00000553884	TTC21A	Q8NDW8	1320 aa		13.8	□□□□□ -0.2
RBM23-209	ENST00000553884	ANKRD36B	Q8N2N9	1353 aa		13.8	□□□□□ -0.2
RBM23-209	ENST00000553884	HTRA3	P83110	453 aa		13.79	□□□□□ -0.2
RBM23-209	ENST00000553884	DDX54	Q8TDD1	881 aa	Known RBP	13.79	□□□□□ -0.2
RBM23-209	ENST00000553884	ZNF692	Q9BU19	519 aa	Predicted RBP	13.79	□□□□□ -0.2
RBM23-209	ENST00000553884	CIC	Q96RK0	1608 aa	Predicted RBP	13.79	□□□□□ -0.2
RBM23-209	ENST00000553884	ANKRD24	Q8TF21	1146 aa		13.78	□□□□□ -0.2
RBM23-209	ENST00000553884	SYTL4	Q96C24	671 aa	Predicted RBP	13.78	□□□□□ -0.2
RBM23-209	ENST00000553884	WWC3	Q9ULE0	1092 aa		13.78	□□□□□ -0.2
RBM23-209	ENST00000553884	SLC34A2	O95436	690 aa		13.77	□□□□□ -0.21
RBM23-209	ENST00000553884	DOT1L	Q8TEK3	1739 aa		13.76	□□□□□ -0.21
RBM23-209	ENST00000553884	NMRK2	Q9NPI5	230 aa		13.76	□□□□□ -0.21
RBM23-209	ENST00000553884	USP31	Q70CQ4	1352 aa		13.75	□□□□□ -0.21
RBM23-209	ENST00000553884	FLAD1	Q8NFF5	587 aa		13.75	□□□□□ -0.21
RBM23-209	ENST00000553884	RBM46	Q8TBY0	533 aa	Known RBP	13.75	□□□□□ -0.21
RBM23-209	ENST00000553884	USP54	Q70EL1	1684 aa		13.72	□□□□□ -0.21
RBM23-209	ENST00000553884	USP47	Q96K76	1375 aa		13.72	□□□□□ -0.21
RBM23-209	ENST00000553884	RAB3GAP2	Q9H2M9	1393 aa		13.72	□□□□□ -0.21
RBM23-209	ENST00000553884	EVC2	Q86UK5	1308 aa		13.72	□□□□□ -0.21
RBM23-209	ENST00000553884	LTN1	O94822	1766 aa		13.72	□□□□□ -0.21
RBM23-209	ENST00000553884	C5	P01031	1676 aa		13.72	□□□□□ -0.21
RBM23-209	ENST00000553884	KTN1	Q86UP2	1357 aa	Known RBP	13.71	□□□□□ -0.21
RBM23-209	ENST00000553884	FSTL1	Q12841	308 aa		13.71	□□□□□ -0.21
RBM23-209	ENST00000553884	AMIGO3	Q86WK7	504 aa		13.71	□□□□□ -0.21
RBM23-209	ENST00000553884	NME9	Q86XW9	330 aa		13.69	□□□□□ -0.22
RBM23-209	ENST00000553884	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
RBM23-209	ENST00000553884	TOGARAM1	Q9Y4F4	1720 aa		13.68	□□□□□ -0.22
RBM23-209	ENST00000553884	ZCRB1	Q8TBF4	217 aa	Known RBP	13.68	□□□□□ -0.22
RBM23-209	ENST00000553884	TAF1L	Q8IZX4	1826 aa		13.68	□□□□□ -0.22
RBM23-209	ENST00000553884	PXDNL	A1KZ92	1463 aa		13.67	□□□□□ -0.22
RBM23-209	ENST00000553884	PCNT	O95613	3336 aa		13.67	□□□□□ -0.22
RBM23-209	ENST00000553884	MON2	Q7Z3U7	1717 aa		13.67	□□□□□ -0.22
RBM23-209	ENST00000553884	FAM208A	Q9UK61	1670 aa	Known RBP	13.67	□□□□□ -0.22
RBM23-209	ENST00000553884	HSPA1A	P0DMV8	641 aa	Known RBP	13.67	□□□□□ -0.22
RBM23-209	ENST00000553884	HSPA1B	P0DMV9	641 aa	Known RBP	13.67	□□□□□ -0.22
RBM23-209	ENST00000553884	SMIM5	Q71RC9	77 aa		13.67	□□□□□ -0.22
RBM23-209	ENST00000553884	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.67	□□□□□ -0.22
RBM23-209	ENST00000553884	IP6K1	Q92551	441 aa		13.67	□□□□□ -0.22
RBM23-209	ENST00000553884	MEGF6	O75095	1541 aa		13.66	□□□□□ -0.22
RBM23-209	ENST00000553884	HMGB2	P26583	209 aa	Known RBP	13.66	□□□□□ -0.22
RBM23-209	ENST00000553884	LTV1	Q96GA3	475 aa	Predicted RBP	13.66	□□□□□ -0.22
RBM23-209	ENST00000553884	C4B	P0C0L5	1744 aa		13.66	□□□□□ -0.22
RBM23-209	ENST00000553884	KIAA1551	Q9HCM1	1747 aa		13.66	□□□□□ -0.22
RBM23-209	ENST00000553884	PALLD	Q8WX93	1383 aa		13.66	□□□□□ -0.22
RBM23-209	ENST00000553884	SBNO2	Q9Y2G9	1366 aa		13.66	□□□□□ -0.22
RBM23-209	ENST00000553884	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.65	□□□□□ -0.22
RBM23-209	ENST00000553884	C10orf71	Q711Q0	1435 aa		13.64	□□□□□ -0.23
RBM23-209	ENST00000553884	UBR3	Q6ZT12	1888 aa		13.64	□□□□□ -0.23
RBM23-209	ENST00000553884	CD163L1	Q9NR16	1453 aa		13.64	□□□□□ -0.23
RBM23-209	ENST00000553884	PHF14	O94880	888 aa		13.64	□□□□□ -0.23
RBM23-209	ENST00000553884	ARHGAP27	Q6ZUM4	889 aa		13.64	□□□□□ -0.23
RBM23-209	ENST00000553884	AK7	Q96M32	723 aa		13.64	□□□□□ -0.23
RBM23-209	ENST00000553884	BCS1L	Q9Y276	419 aa		13.64	□□□□□ -0.23
RBM23-209	ENST00000553884	PLEKHG2	Q9H7P9	1386 aa		13.63	□□□□□ -0.23
RBM23-209	ENST00000553884	KIF13B	Q9NQT8	1826 aa		13.63	□□□□□ -0.23
RBM23-209	ENST00000553884	C9orf131	Q5VYM1	1079 aa		13.63	□□□□□ -0.23
RBM23-209	ENST00000553884	NSD3	Q9BZ95	1437 aa		13.63	□□□□□ -0.23
RBM23-209	ENST00000553884		A0A0G2JLW4	131 aa		13.62	□□□□□ -0.23
RBM23-209	ENST00000553884	SSFA2	P28290	1259 aa		13.62	□□□□□ -0.23
RBM23-209	ENST00000553884	TGFB2	P61812	414 aa		13.62	□□□□□ -0.23
RBM23-209	ENST00000553884	KCP	Q6ZWJ8	1503 aa		13.62	□□□□□ -0.23
RBM23-209	ENST00000553884	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.61	□□□□□ -0.23
RBM23-209	ENST00000553884	MMP10	P09238	476 aa		13.6	□□□□□ -0.23
RBM23-209	ENST00000553884	SMC1B	Q8NDV3	1235 aa		13.6	□□□□□ -0.23
RBM23-209	ENST00000553884	RRAGC	Q9HB90	399 aa		13.6	□□□□□ -0.23
RBM23-209	ENST00000553884	KDM2B	Q8NHM5	1336 aa		13.6	□□□□□ -0.23
RBM23-209	ENST00000553884	RGPD2	P0DJD1	1756 aa		13.59	□□□□□ -0.23
RBM23-209	ENST00000553884	MPRIP	Q6WCQ1	1025 aa		13.59	□□□□□ -0.23
RBM23-209	ENST00000553884	SMARCC1	Q92922	1105 aa	Predicted RBP	13.59	□□□□□ -0.23
RBM23-209	ENST00000553884	CGNL1	Q0VF96	1302 aa		13.59	□□□□□ -0.23
RBM23-209	ENST00000553884	PKD1L3	Q7Z443	1732 aa		13.59	□□□□□ -0.23
RBM23-209	ENST00000553884	EDC4	Q6P2E9	1401 aa	Known RBP	13.58	□□□□□ -0.24
RBM23-209	ENST00000553884	FCHSD2	O94868	740 aa		13.58	□□□□□ -0.24
RBM23-209	ENST00000553884	DPEP1	P16444	411 aa		13.58	□□□□□ -0.24
RBM23-209	ENST00000553884	HOXC9	P31274	260 aa		13.58	□□□□□ -0.24
RBM23-209	ENST00000553884	PCDH10	Q9P2E7	1040 aa		13.58	□□□□□ -0.24
RBM23-209	ENST00000553884	MAP3K19	Q56UN5	1328 aa		13.58	□□□□□ -0.24
RBM23-209	ENST00000553884	LINC00116	Q8NCU8	138 aa		13.57	□□□□□ -0.24
RBM23-209	ENST00000553884	BRCA1	P38398	1863 aa	Known RBP	13.57	□□□□□ -0.24
RBM23-209	ENST00000553884	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.56	□□□□□ -0.24
RBM23-209	ENST00000553884	MAP2	P11137	1827 aa	Known RBP	13.56	□□□□□ -0.24
RBM23-209	ENST00000553884	NBPF6	Q5VWK0	638 aa		13.56	□□□□□ -0.24
RBM23-209	ENST00000553884	NBPF4	Q96M43	638 aa		13.56	□□□□□ -0.24
RBM23-209	ENST00000553884	KCNA3	P22001	575 aa		13.55	□□□□□ -0.24
RBM23-209	ENST00000553884	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.55	□□□□□ -0.24
RBM23-209	ENST00000553884	RNF181	Q9P0P0	153 aa		13.55	□□□□□ -0.24
RBM23-209	ENST00000553884	PCDH11X	Q9BZA7	1347 aa		13.55	□□□□□ -0.24
RBM23-209	ENST00000553884	PCDH11Y	Q9BZA8	1340 aa		13.55	□□□□□ -0.24
RBM23-209	ENST00000553884	ARFGEF1	Q9Y6D6	1849 aa		13.55	□□□□□ -0.24
RBM23-209	ENST00000553884	LOC102724428	A0A0B4J2F2	783 aa		13.54	□□□□□ -0.24
RBM23-209	ENST00000553884	GNPAT	O15228	680 aa		13.54	□□□□□ -0.24
RBM23-209	ENST00000553884	FBLN1	P23142	703 aa		13.54	□□□□□ -0.24
RBM23-209	ENST00000553884	AMPH	P49418	695 aa		13.54	□□□□□ -0.24
RBM23-209	ENST00000553884	SIK1	P57059	783 aa		13.54	□□□□□ -0.24
RBM23-209	ENST00000553884	USHBP1	Q8N6Y0	703 aa		13.54	□□□□□ -0.24
RBM23-209	ENST00000553884	RAPGEF4	Q8WZA2	1011 aa		13.54	□□□□□ -0.24
RBM23-209	ENST00000553884	PIGB	Q92521	554 aa		13.54	□□□□□ -0.24
RBM23-209	ENST00000553884	SLC12A5	Q9H2X9	1139 aa		13.54	□□□□□ -0.24
RBM23-209	ENST00000553884	ITGB4	P16144	1822 aa		13.53	□□□□□ -0.24
RBM23-209	ENST00000553884	CYP27B1	O15528	508 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms