RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 RGS12O14924 1447 aa18.12■□□□□ 0.49
ACTN1-211ENST00000553882 SLC4A2P04920 1241 aa18.12■□□□□ 0.49
ACTN1-211ENST00000553882 CDC45O75419 566 aa18.11■□□□□ 0.49
ACTN1-211ENST00000553882 SMARCA5O60264 1052 aaPredicted RBP18.11■□□□□ 0.49
ACTN1-211ENST00000553882 TRAK2O60296 914 aa18.11■□□□□ 0.49
ACTN1-211ENST00000553882 EIF5BO60841 1220 aaKnown RBP18.11■□□□□ 0.49
ACTN1-211ENST00000553882 PTPRUQ92729 1446 aa18.1■□□□□ 0.49
ACTN1-211ENST00000553882 MTHFSDQ2M296 383 aaKnown RBP18.1■□□□□ 0.49
ACTN1-211ENST00000553882 SLC4A10Q6U841 1118 aa18.1■□□□□ 0.49
ACTN1-211ENST00000553882 AMOTL2Q9Y2J4 779 aa18.1■□□□□ 0.49
ACTN1-211ENST00000553882 ATP10DQ9P241 1426 aa18.1■□□□□ 0.49
ACTN1-211ENST00000553882 NCOA3Q9Y6Q9 1424 aa18.1■□□□□ 0.49
ACTN1-211ENST00000553882 KIF13AQ9H1H9 1805 aa18.1■□□□□ 0.49
ACTN1-211ENST00000553882 CEP85Q6P2H3 762 aa18.1■□□□□ 0.49
ACTN1-211ENST00000553882 ANKRD44Q8N8A2 993 aa18.1■□□□□ 0.49
ACTN1-211ENST00000553882 DDIT3P35638 169 aa18.09■□□□□ 0.49
ACTN1-211ENST00000553882 HAP1P54257 671 aaPredicted RBP18.09■□□□□ 0.49
ACTN1-211ENST00000553882 NGDNQ8NEJ9 315 aaKnown RBP18.09■□□□□ 0.49
ACTN1-211ENST00000553882 PLEKHG1Q9ULL1 1385 aa18.09■□□□□ 0.49
ACTN1-211ENST00000553882 F6X3S4 739 aa18.09■□□□□ 0.49
ACTN1-211ENST00000553882 TSPYL4Q9UJ04 414 aa18.09■□□□□ 0.49
ACTN1-211ENST00000553882 RTF1Q92541 710 aaKnown RBP18.08■□□□□ 0.49
ACTN1-211ENST00000553882 KIF24Q5T7B8 1368 aa18.08■□□□□ 0.48
ACTN1-211ENST00000553882 TTC22Q5TAA0 569 aa18.08■□□□□ 0.48
ACTN1-211ENST00000553882 G2E3Q7L622 706 aa18.08■□□□□ 0.48
ACTN1-211ENST00000553882 TNPO1Q92973 898 aaKnown RBP18.08■□□□□ 0.48
ACTN1-211ENST00000553882 RTL1A6NKG5 1358 aa18.07■□□□□ 0.48
ACTN1-211ENST00000553882 KIAA0232Q92628 1395 aa18.07■□□□□ 0.48
ACTN1-211ENST00000553882 NUTM2GQ5VZR2 741 aa18.07■□□□□ 0.48
ACTN1-211ENST00000553882 EID1Q9Y6B2 187 aa18.07■□□□□ 0.48
ACTN1-211ENST00000553882 RIMS1Q86UR5 1692 aaKnown RBP18.07■□□□□ 0.48
ACTN1-211ENST00000553882 CRB1P82279 1406 aa18.07■□□□□ 0.48
ACTN1-211ENST00000553882 USP31Q70CQ4 1352 aa18.07■□□□□ 0.48
ACTN1-211ENST00000553882 AMPHP49418 695 aa18.07■□□□□ 0.48
ACTN1-211ENST00000553882 L1TD1Q5T7N2 865 aaKnown RBP18.07■□□□□ 0.48
ACTN1-211ENST00000553882 TOPAZ1Q8N9V7 1692 aa18.07■□□□□ 0.48
ACTN1-211ENST00000553882 PTPRCP08575 1304 aa18.06■□□□□ 0.48
ACTN1-211ENST00000553882 GOLGA6L3A6NEY3 463 aa18.06■□□□□ 0.48
ACTN1-211ENST00000553882 K7ELQ4 463 aaPredicted RBP18.06■□□□□ 0.48
ACTN1-211ENST00000553882 RPAP2Q8IXW5 612 aaPredicted RBP18.06■□□□□ 0.48
ACTN1-211ENST00000553882 EYA1Q99502 592 aa18.05■□□□□ 0.48
ACTN1-211ENST00000553882 DDX11L8A8MPP1 907 aa18.04■□□□□ 0.48
ACTN1-211ENST00000553882 XRCC6P12956 609 aaKnown RBP eCLIP18.04■□□□□ 0.48
ACTN1-211ENST00000553882 NECTIN2Q92692 538 aa18.04■□□□□ 0.48
ACTN1-211ENST00000553882 ANO8Q9HCE9 1232 aaPredicted RBP18.04■□□□□ 0.48
ACTN1-211ENST00000553882 SSH2Q76I76 1423 aa18.04■□□□□ 0.48
ACTN1-211ENST00000553882 GAS2L2Q8NHY3 880 aa18.04■□□□□ 0.48
ACTN1-211ENST00000553882 PANK2Q9BZ23 570 aa18.04■□□□□ 0.48
ACTN1-211ENST00000553882 FLT4P35916 1363 aa18.04■□□□□ 0.48
ACTN1-211ENST00000553882 RGPD1P0DJD0 1748 aa18.04■□□□□ 0.48
ACTN1-211ENST00000553882 NALCNQ8IZF0 1738 aa18.04■□□□□ 0.48
ACTN1-211ENST00000553882 ARHGEF10O15013 1369 aa18.03■□□□□ 0.48
ACTN1-211ENST00000553882 SDSP20132 328 aa18.03■□□□□ 0.48
ACTN1-211ENST00000553882 NLRP6P59044 892 aa18.02■□□□□ 0.48
ACTN1-211ENST00000553882 RAB3GAP1Q15042 981 aa18.02■□□□□ 0.48
ACTN1-211ENST00000553882 TTC21AQ8NDW8 1320 aa18.02■□□□□ 0.47
ACTN1-211ENST00000553882 SBNO1A3KN83 1393 aa18.02■□□□□ 0.47
ACTN1-211ENST00000553882 FSD2A1L4K1 749 aa18.02■□□□□ 0.47
ACTN1-211ENST00000553882 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.02■□□□□ 0.47
ACTN1-211ENST00000553882 CEP170BQ9Y4F5 1589 aaPredicted RBP18.01■□□□□ 0.47
ACTN1-211ENST00000553882 LTV1Q96GA3 475 aaPredicted RBP18.01■□□□□ 0.47
ACTN1-211ENST00000553882 CIZ1Q9ULV3 898 aaPredicted RBP18.01■□□□□ 0.47
ACTN1-211ENST00000553882 RGPD8O14715 1765 aaPredicted RBP18.01■□□□□ 0.47
ACTN1-211ENST00000553882 GBP4Q96PP9 640 aa18■□□□□ 0.47
ACTN1-211ENST00000553882 USP26Q9BXU7 913 aa18■□□□□ 0.47
ACTN1-211ENST00000553882 TSHZ3Q63HK5 1081 aa17.99■□□□□ 0.47
ACTN1-211ENST00000553882 EXOC6BQ9Y2D4 811 aa17.99■□□□□ 0.47
ACTN1-211ENST00000553882 IGSF1Q8N6C5 1336 aa17.99■□□□□ 0.47
ACTN1-211ENST00000553882 KDRP35968 1356 aa17.99■□□□□ 0.47
ACTN1-211ENST00000553882 SSFA2P28290 1259 aa17.99■□□□□ 0.47
ACTN1-211ENST00000553882 STK31Q9BXU1 1019 aa17.99■□□□□ 0.47
ACTN1-211ENST00000553882 HMMRO75330 724 aa17.98■□□□□ 0.47
ACTN1-211ENST00000553882 FKBP5Q13451 457 aaPredicted RBP17.98■□□□□ 0.47
ACTN1-211ENST00000553882 FAM43AQ8N2R8 423 aa17.98■□□□□ 0.47
ACTN1-211ENST00000553882 FMN2Q9NZ56 1722 aa17.98■□□□□ 0.47
ACTN1-211ENST00000553882 C14orf37Q86TY3 774 aa17.97■□□□□ 0.47
ACTN1-211ENST00000553882 TBX22Q9Y458 520 aa17.97■□□□□ 0.47
ACTN1-211ENST00000553882 CCT4P50991 539 aaKnown RBP17.97■□□□□ 0.47
ACTN1-211ENST00000553882 RABEP1Q15276 862 aa17.97■□□□□ 0.47
ACTN1-211ENST00000553882 CASC1Q6TDU7 716 aa17.97■□□□□ 0.47
ACTN1-211ENST00000553882 DIP2AQ14689 1571 aa17.97■□□□□ 0.47
ACTN1-211ENST00000553882 AK9Q5TCS8 1911 aa17.96■□□□□ 0.47
ACTN1-211ENST00000553882 FLIIQ13045 1269 aa17.96■□□□□ 0.47
ACTN1-211ENST00000553882 USHBP1Q8N6Y0 703 aa17.95■□□□□ 0.46
ACTN1-211ENST00000553882 GNAT3A8MTJ3 354 aa17.95■□□□□ 0.46
ACTN1-211ENST00000553882 GNAI2P04899 355 aa17.95■□□□□ 0.46
ACTN1-211ENST00000553882 KCNA6P17658 529 aa17.95■□□□□ 0.46
ACTN1-211ENST00000553882 HOXC9P31274 260 aa17.95■□□□□ 0.46
ACTN1-211ENST00000553882 ABTB2Q8N961 1025 aa17.95■□□□□ 0.46
ACTN1-211ENST00000553882 PIK3C2AO00443 1686 aa17.95■□□□□ 0.46
ACTN1-211ENST00000553882 PDE1AP54750 535 aa17.94■□□□□ 0.46
ACTN1-211ENST00000553882 RRAGDQ9NQL2 400 aaPredicted RBP17.93■□□□□ 0.46
ACTN1-211ENST00000553882 PNMA6EA0A0J9YXQ4 647 aa17.93■□□□□ 0.46
ACTN1-211ENST00000553882 IL17REQ8NFR9 667 aa17.93■□□□□ 0.46
ACTN1-211ENST00000553882 RBM33Q96EV2 1170 aaKnown RBP17.93■□□□□ 0.46
ACTN1-211ENST00000553882 CCDC30Q5VVM6 783 aa17.92■□□□□ 0.46
ACTN1-211ENST00000553882 GRPEL1Q9HAV7 217 aa17.92■□□□□ 0.46
ACTN1-211ENST00000553882 MRE11P49959 708 aa17.92■□□□□ 0.46
ACTN1-211ENST00000553882 PKP1Q13835 747 aa17.91■□□□□ 0.46
ACTN1-211ENST00000553882 THEMISQ8N1K5 641 aaPredicted RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms