RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 RAPGEF4Q8WZA2 1011 aa15.4■□□□□ 0.06
NEK9-202ENST00000553823 CDCA7LQ96GN5 454 aa15.4■□□□□ 0.06
NEK9-202ENST00000553823 CARD10Q9BWT7 1032 aa15.4■□□□□ 0.06
NEK9-202ENST00000553823 NWD2Q9ULI1 1742 aa15.4■□□□□ 0.06
NEK9-202ENST00000553823 AMOTQ4VCS5 1084 aa15.39■□□□□ 0.05
NEK9-202ENST00000553823 PLEKHO1Q53GL0 409 aaPredicted RBP15.39■□□□□ 0.05
NEK9-202ENST00000553823 LARP1Q6PKG0 1096 aaKnown RBP15.39■□□□□ 0.05
NEK9-202ENST00000553823 PLEKHG2Q9H7P9 1386 aa15.38■□□□□ 0.05
NEK9-202ENST00000553823 NRAPQ86VF7 1730 aa15.38■□□□□ 0.05
NEK9-202ENST00000553823 CRB1P82279 1406 aa15.38■□□□□ 0.05
NEK9-202ENST00000553823 TATP17735 454 aaPredicted RBP15.38■□□□□ 0.05
NEK9-202ENST00000553823 C1QBPQ07021 282 aaKnown RBP15.38■□□□□ 0.05
NEK9-202ENST00000553823 E9PSI1 815 aa15.37■□□□□ 0.05
NEK9-202ENST00000553823 SLFN5Q08AF3 891 aa15.37■□□□□ 0.05
NEK9-202ENST00000553823 SLIT2O94813 1529 aa15.37■□□□□ 0.05
NEK9-202ENST00000553823 LRP6O75581 1613 aa15.36■□□□□ 0.05
NEK9-202ENST00000553823 CALD1Q05682 793 aaKnown RBP15.36■□□□□ 0.05
NEK9-202ENST00000553823 MEGF6O75095 1541 aa15.36■□□□□ 0.05
NEK9-202ENST00000553823 IL16Q14005 1332 aa15.36■□□□□ 0.05
NEK9-202ENST00000553823 PARP4Q9UKK3 1724 aaKnown RBP15.35■□□□□ 0.05
NEK9-202ENST00000553823 GNAT3A8MTJ3 354 aa15.35■□□□□ 0.05
NEK9-202ENST00000553823 HTATSF1O43719 755 aaKnown RBP15.35■□□□□ 0.05
NEK9-202ENST00000553823 TRMT2AQ8IZ69 625 aaKnown RBP15.35■□□□□ 0.05
NEK9-202ENST00000553823 RTF1Q92541 710 aaKnown RBP15.35■□□□□ 0.05
NEK9-202ENST00000553823 NGLY1Q96IV0 654 aa15.35■□□□□ 0.05
NEK9-202ENST00000553823 C8orf37Q96NL8 207 aa15.35■□□□□ 0.05
NEK9-202ENST00000553823 SPINK5Q9NQ38 1064 aaPredicted RBP15.35■□□□□ 0.05
NEK9-202ENST00000553823 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.35■□□□□ 0.052e-6■■■□□ 16.3
NEK9-202ENST00000553823 MAP3K5Q99683 1374 aa15.35■□□□□ 0.05
NEK9-202ENST00000553823 DUSP27Q5VZP5 1158 aa15.34■□□□□ 0.05
NEK9-202ENST00000553823 ZNF530Q6P9A1 599 aaPredicted RBP15.34■□□□□ 0.05
NEK9-202ENST00000553823 SPG7Q9UQ90 795 aa15.34■□□□□ 0.05
NEK9-202ENST00000553823 PKD1L3Q7Z443 1732 aa15.34■□□□□ 0.05
NEK9-202ENST00000553823 IL2RBP14784 551 aa15.33■□□□□ 0.04
NEK9-202ENST00000553823 DCTN1Q14203 1278 aa15.33■□□□□ 0.04
NEK9-202ENST00000553823 MEX3CQ5U5Q3 659 aaKnown RBP15.33■□□□□ 0.04
NEK9-202ENST00000553823 THUMPD2Q9BTF0 503 aaKnown RBP15.33■□□□□ 0.04
NEK9-202ENST00000553823 MYH16Q9H6N6 1097 aa15.33■□□□□ 0.04
NEK9-202ENST00000553823 VIRMAQ69YN4 1812 aaKnown RBP15.33■□□□□ 0.04
NEK9-202ENST00000553823 OVOS2A0A0G2JMS6 1433 aa15.33■□□□□ 0.04
NEK9-202ENST00000553823 AKAP4Q5JQC9 854 aa15.32■□□□□ 0.04
NEK9-202ENST00000553823 C1orf141Q5JVX7 400 aa15.32■□□□□ 0.04
NEK9-202ENST00000553823 MCM10Q7L590 875 aa15.32■□□□□ 0.04
NEK9-202ENST00000553823 UNC5CLQ8IV45 518 aa15.32■□□□□ 0.04
NEK9-202ENST00000553823 FNBP4Q8N3X1 1017 aaPredicted RBP15.32■□□□□ 0.04
NEK9-202ENST00000553823 USP35Q9P2H5 1018 aa15.32■□□□□ 0.04
NEK9-202ENST00000553823 GNAI1P63096 354 aa15.3■□□□□ 0.04
NEK9-202ENST00000553823 SPATA31A1Q5TZJ5 1347 aa15.3■□□□□ 0.04
NEK9-202ENST00000553823 SPATA31A5Q5VU36 1347 aa15.3■□□□□ 0.04
NEK9-202ENST00000553823 BCL9LQ86UU0 1499 aa15.3■□□□□ 0.04
NEK9-202ENST00000553823 SPATA31A7Q8IWB4 1347 aa15.3■□□□□ 0.04
NEK9-202ENST00000553823 FBXO41Q8TF61 875 aa15.3■□□□□ 0.04
NEK9-202ENST00000553823 WNK3Q9BYP7 1800 aa15.3■□□□□ 0.04
NEK9-202ENST00000553823 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.3■□□□□ 0.04
NEK9-202ENST00000553823 IFT57Q9NWB7 429 aa15.3■□□□□ 0.04
NEK9-202ENST00000553823 THRAP3Q9Y2W1 955 aaKnown RBP15.3■□□□□ 0.04
NEK9-202ENST00000553823 IFNL2Q8IZJ0 200 aa15.29■□□□□ 0.04
NEK9-202ENST00000553823 IL17REQ8NFR9 667 aa15.29■□□□□ 0.04
NEK9-202ENST00000553823 ZCRB1Q8TBF4 217 aaKnown RBP15.29■□□□□ 0.04
NEK9-202ENST00000553823 LRRC37A3O60309 1634 aa15.28■□□□□ 0.04
NEK9-202ENST00000553823 DISP2A7MBM2 1401 aa15.28■□□□□ 0.04
NEK9-202ENST00000553823 FANCIQ9NVI1 1328 aa15.28■□□□□ 0.04
NEK9-202ENST00000553823 ZNF853P0CG23 659 aa15.28■□□□□ 0.04
NEK9-202ENST00000553823 PHKG2P15735 406 aa15.28■□□□□ 0.04
NEK9-202ENST00000553823 VPS72Q15906 364 aa15.28■□□□□ 0.04
NEK9-202ENST00000553823 CFAP44Q96MT7 982 aa15.28■□□□□ 0.04
NEK9-202ENST00000553823 CDCA7Q9BWT1 371 aaPredicted RBP15.28■□□□□ 0.04
NEK9-202ENST00000553823 USP21Q9UK80 565 aa15.28■□□□□ 0.04
NEK9-202ENST00000553823 CCDC9Q9Y3X0 531 aaKnown RBP15.28■□□□□ 0.04
NEK9-202ENST00000553823 LAS1LQ9Y4W2 734 aaKnown RBP15.28■□□□□ 0.04
NEK9-202ENST00000553823 CEMIPQ8WUJ3 1361 aa15.27■□□□□ 0.04
NEK9-202ENST00000553823 SCN11AQ9UI33 1791 aa15.27■□□□□ 0.04
NEK9-202ENST00000553823 PCDH11XQ9BZA7 1347 aa15.27■□□□□ 0.04
NEK9-202ENST00000553823 PCDH11YQ9BZA8 1340 aa15.27■□□□□ 0.04
NEK9-202ENST00000553823 CYP27B1O15528 508 aa15.27■□□□□ 0.04
NEK9-202ENST00000553823 MPRIPQ6WCQ1 1025 aa15.27■□□□□ 0.04
NEK9-202ENST00000553823 TSR2Q969E8 191 aaKnown RBP15.27■□□□□ 0.04
NEK9-202ENST00000553823 SHANK3Q9BYB0 1731 aa15.26■□□□□ 0.03
NEK9-202ENST00000553823 ADAMTS7Q9UKP4 1686 aa15.26■□□□□ 0.03
NEK9-202ENST00000553823 AFF2P51816 1311 aa15.26■□□□□ 0.03
NEK9-202ENST00000553823 RNMTO43148 476 aaKnown RBP15.26■□□□□ 0.03
NEK9-202ENST00000553823 LGR6Q9HBX8 967 aa15.26■□□□□ 0.03
NEK9-202ENST00000553823 KAT6BQ8WYB5 2073 aa15.25■□□□□ 0.03
NEK9-202ENST00000553823 CHL1O00533 1208 aa15.25■□□□□ 0.03
NEK9-202ENST00000553823 HSP90AB1P08238 724 aaKnown RBP15.25■□□□□ 0.03
NEK9-202ENST00000553823 BARGINQ6ZT62 677 aa15.25■□□□□ 0.03
NEK9-202ENST00000553823 MBIPQ9NS73 344 aa15.25■□□□□ 0.03
NEK9-202ENST00000553823 RCAN3Q9UKA8 241 aa15.25■□□□□ 0.03
NEK9-202ENST00000553823 TAF7Q15545 349 aaPredicted RBP15.24■□□□□ 0.03
NEK9-202ENST00000553823 EXOC5O00471 708 aa15.23■□□□□ 0.03
NEK9-202ENST00000553823 EXOSC9Q06265 439 aaKnown RBP15.23■□□□□ 0.03
NEK9-202ENST00000553823 TEFQ10587 303 aa15.23■□□□□ 0.03
NEK9-202ENST00000553823 DCAF5Q96JK2 942 aa15.23■□□□□ 0.03
NEK9-202ENST00000553823 BABAM1Q9NWV8 329 aa15.23■□□□□ 0.03
NEK9-202ENST00000553823 SUPT16HQ9Y5B9 1047 aaKnown RBP15.23■□□□□ 0.03
NEK9-202ENST00000553823 KDM6AO15550 1401 aaPredicted RBP15.23■□□□□ 0.03
NEK9-202ENST00000553823 SIPA1L3O60292 1781 aaPredicted RBP15.22■□□□□ 0.03
NEK9-202ENST00000553823 CT47B1P0C2W7 299 aaPredicted RBP15.22■□□□□ 0.03
NEK9-202ENST00000553823 DDX54Q8TDD1 881 aaKnown RBP15.22■□□□□ 0.03
NEK9-202ENST00000553823 TSPYL4Q9UJ04 414 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms