RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 PBX2P40425 430 aa10.95□□□□□ -0.66
ATXN3-219ENST00000553488 PTGER2P43116 358 aa10.95□□□□□ -0.66
ATXN3-219ENST00000553488 PDIA6Q15084 440 aa10.95□□□□□ -0.66
ATXN3-219ENST00000553488 CABLES1Q8TDN4 633 aa10.95□□□□□ -0.66
ATXN3-219ENST00000553488 ADGRB1O14514 1584 aa10.94□□□□□ -0.66
ATXN3-219ENST00000553488 ANKARQ7Z5J8 1434 aa10.94□□□□□ -0.66
ATXN3-219ENST00000553488 PPP4R3BQ5MIZ7 849 aa10.94□□□□□ -0.66
ATXN3-219ENST00000553488 KRT27Q7Z3Y8 459 aa10.94□□□□□ -0.66
ATXN3-219ENST00000553488 SIRT1Q96EB6 747 aa10.94□□□□□ -0.66
ATXN3-219ENST00000553488 DISP2A7MBM2 1401 aa10.93□□□□□ -0.66
ATXN3-219ENST00000553488 RGL3Q3MIN7 710 aa10.93□□□□□ -0.66
ATXN3-219ENST00000553488 SPNS2Q8IVW8 549 aa10.93□□□□□ -0.66
ATXN3-219ENST00000553488 RREB1Q92766 1687 aa10.92□□□□□ -0.66
ATXN3-219ENST00000553488 PHRF1Q9P1Y6 1649 aaKnown RBP10.92□□□□□ -0.66
ATXN3-219ENST00000553488 SF3B2Q13435 895 aaKnown RBP10.92□□□□□ -0.66
ATXN3-219ENST00000553488 TULP4Q9NRJ4 1543 aa10.91□□□□□ -0.66
ATXN3-219ENST00000553488 FAM83GA6ND36 823 aa10.91□□□□□ -0.66
ATXN3-219ENST00000553488 HRCP23327 699 aa10.91□□□□□ -0.66
ATXN3-219ENST00000553488 ZNF454Q8N9F8 522 aa10.91□□□□□ -0.66
ATXN3-219ENST00000553488 C14orf93Q9H972 538 aaKnown RBP10.91□□□□□ -0.66
ATXN3-219ENST00000553488 PCDHGA10Q9Y5H3 936 aa10.91□□□□□ -0.66
ATXN3-219ENST00000553488 ITSN1Q15811 1721 aa10.91□□□□□ -0.66
ATXN3-219ENST00000553488 NUP188Q5SRE5 1749 aa10.9□□□□□ -0.66
ATXN3-219ENST00000553488 SPDYE16A6NNV3 312 aaPredicted RBP10.9□□□□□ -0.66
ATXN3-219ENST00000553488 ARHGAP33O14559 1287 aa10.9□□□□□ -0.66
ATXN3-219ENST00000553488 SLC24A1O60721 1099 aa10.9□□□□□ -0.66
ATXN3-219ENST00000553488 HAP1P54257 671 aaPredicted RBP10.9□□□□□ -0.66
ATXN3-219ENST00000553488 PSME1Q06323 249 aa10.9□□□□□ -0.66
ATXN3-219ENST00000553488 KCNV2Q8TDN2 545 aa10.9□□□□□ -0.66
ATXN3-219ENST00000553488 BCL2L12Q9HB09 334 aa10.9□□□□□ -0.66
ATXN3-219ENST00000553488 AXIN2Q9Y2T1 843 aa10.9□□□□□ -0.66
ATXN3-219ENST00000553488 ARHGEF28Q8N1W1 1705 aaKnown RBP10.89□□□□□ -0.67
ATXN3-219ENST00000553488 PHF14O94880 888 aa10.89□□□□□ -0.67
ATXN3-219ENST00000553488 BAG6P46379 1132 aa10.89□□□□□ -0.67
ATXN3-219ENST00000553488 LSM11P83369 360 aaKnown RBP eCLIP10.89□□□□□ -0.67
ATXN3-219ENST00000553488 DHX57Q6P158 1386 aaKnown RBP10.89□□□□□ -0.67
ATXN3-219ENST00000553488 TOPAZ1Q8N9V7 1692 aa10.89□□□□□ -0.67
ATXN3-219ENST00000553488 FAM98CQ17RN3 349 aaKnown RBP10.88□□□□□ -0.67
ATXN3-219ENST00000553488 CFAP70Q5T0N1 1121 aa10.88□□□□□ -0.67
ATXN3-219ENST00000553488 ZDHHC16Q969W1 377 aa10.88□□□□□ -0.67
ATXN3-219ENST00000553488 PRAM1Q96QH2 718 aa10.88□□□□□ -0.67
ATXN3-219ENST00000553488 MPHOSPH9Q99550 1183 aa10.88□□□□□ -0.67
ATXN3-219ENST00000553488 KDM2AQ9Y2K7 1162 aa10.88□□□□□ -0.67
ATXN3-219ENST00000553488 CCDC9Q9Y3X0 531 aaKnown RBP10.88□□□□□ -0.67
ATXN3-219ENST00000553488 SPATA31A5Q5VU36 1347 aa10.87□□□□□ -0.67
ATXN3-219ENST00000553488 SPATA31A7Q8IWB4 1347 aa10.87□□□□□ -0.67
ATXN3-219ENST00000553488 PRR36Q9H6K5 1346 aa10.87□□□□□ -0.67
ATXN3-219ENST00000553488 PMFBP1Q8TBY8 1022 aa10.87□□□□□ -0.67
ATXN3-219ENST00000553488 ARHGEF1Q92888 912 aaKnown RBP10.87□□□□□ -0.67
ATXN3-219ENST00000553488 ADAM33Q9BZ11 813 aa10.87□□□□□ -0.67
ATXN3-219ENST00000553488 BTG4Q9NY30 223 aa10.87□□□□□ -0.67
ATXN3-219ENST00000553488 ATP7BP35670 1465 aa10.87□□□□□ -0.67
ATXN3-219ENST00000553488 ACIN1Q9UKV3 1341 aaKnown RBP10.86□□□□□ -0.67
ATXN3-219ENST00000553488 PSEN2P49810 448 aa10.86□□□□□ -0.67
ATXN3-219ENST00000553488 EN1Q05925 392 aaPredicted RBP10.86□□□□□ -0.67
ATXN3-219ENST00000553488 SAFB2Q14151 953 aaKnown RBP eCLIP10.86□□□□□ -0.67
ATXN3-219ENST00000553488 LMOD2Q6P5Q4 547 aa10.86□□□□□ -0.67
ATXN3-219ENST00000553488 NRKQ7Z2Y5 1582 aa10.86□□□□□ -0.67
ATXN3-219ENST00000553488 LMO7Q8WWI1 1683 aa10.85□□□□□ -0.67
ATXN3-219ENST00000553488 A0A0G2JS52 829 aa10.85□□□□□ -0.67
ATXN3-219ENST00000553488 MYT1Q01538 1121 aa10.85□□□□□ -0.67
ATXN3-219ENST00000553488 FAM182BQ5T319 152 aa10.85□□□□□ -0.67
ATXN3-219ENST00000553488 DMRTA1Q5VZB9 504 aa10.85□□□□□ -0.67
ATXN3-219ENST00000553488 EIF3AQ14152 1382 aaKnown RBP10.85□□□□□ -0.67
ATXN3-219ENST00000553488 EPAS1Q99814 870 aa10.84□□□□□ -0.67
ATXN3-219ENST00000553488 PLSCR2Q9NRY7 297 aa10.84□□□□□ -0.67
ATXN3-219ENST00000553488 PARP4Q9UKK3 1724 aaKnown RBP10.84□□□□□ -0.67
ATXN3-219ENST00000553488 UTRNP46939 3433 aa10.83□□□□□ -0.68
ATXN3-219ENST00000553488 RGPD3A6NKT7 1758 aaPredicted RBP10.83□□□□□ -0.68
ATXN3-219ENST00000553488 RGPD4Q7Z3J3 1758 aa10.83□□□□□ -0.68
ATXN3-219ENST00000553488 GPRASP1Q5JY77 1395 aa10.83□□□□□ -0.68
ATXN3-219ENST00000553488 MMRN1Q13201 1228 aa10.83□□□□□ -0.68
ATXN3-219ENST00000553488 R3HDM1Q15032 1099 aaKnown RBP10.83□□□□□ -0.68
ATXN3-219ENST00000553488 TYW1BQ6NUM6 668 aa10.83□□□□□ -0.68
ATXN3-219ENST00000553488 FBXW7Q969H0 707 aa10.83□□□□□ -0.68
ATXN3-219ENST00000553488 SPATA31A1Q5TZJ5 1347 aa10.83□□□□□ -0.68
ATXN3-219ENST00000553488 PARD3Q8TEW0 1356 aa10.82□□□□□ -0.68
ATXN3-219ENST00000553488 CAMKK2Q96RR4 588 aa10.82□□□□□ -0.68
ATXN3-219ENST00000553488 HIRIP3Q9BW71 556 aaPredicted RBP10.82□□□□□ -0.68
ATXN3-219ENST00000553488 SBF2Q86WG5 1849 aa10.81□□□□□ -0.68
ATXN3-219ENST00000553488 WNK3Q9BYP7 1800 aa10.81□□□□□ -0.68
ATXN3-219ENST00000553488 PEAK1Q9H792 1746 aa10.81□□□□□ -0.68
ATXN3-219ENST00000553488 KIAA0232Q92628 1395 aa10.81□□□□□ -0.68
ATXN3-219ENST00000553488 TK2O00142 265 aa10.81□□□□□ -0.68
ATXN3-219ENST00000553488 EZH2Q15910 746 aaKnown RBP10.81□□□□□ -0.68
ATXN3-219ENST00000553488 DDX12PQ92771 950 aa10.81□□□□□ -0.68
ATXN3-219ENST00000553488 POGKQ9P215 609 aa10.81□□□□□ -0.68
ATXN3-219ENST00000553488 MINK1Q8N4C8 1332 aaPredicted RBP10.81□□□□□ -0.68
ATXN3-219ENST00000553488 ANKRD13DQ6ZTN6 518 aa10.8□□□□□ -0.68
ATXN3-219ENST00000553488 VSIG10Q8N0Z9 540 aa10.8□□□□□ -0.68
ATXN3-219ENST00000553488 KCNK17Q96T54 332 aa10.8□□□□□ -0.68
ATXN3-219ENST00000553488 SLC4A5Q9BY07 1137 aa10.8□□□□□ -0.68
ATXN3-219ENST00000553488 PRDM11Q9NQV5 511 aa10.8□□□□□ -0.68
ATXN3-219ENST00000553488 SSH2Q76I76 1423 aa10.8□□□□□ -0.68
ATXN3-219ENST00000553488 CAMTA1Q9Y6Y1 1673 aa10.79□□□□□ -0.68
ATXN3-219ENST00000553488 WASLO00401 505 aaPredicted RBP10.79□□□□□ -0.68
ATXN3-219ENST00000553488 HRO43593 1189 aa10.79□□□□□ -0.68
ATXN3-219ENST00000553488 PTPREP23469 700 aa10.79□□□□□ -0.68
ATXN3-219ENST00000553488 ADGRD1Q6QNK2 874 aa10.79□□□□□ -0.68
ATXN3-219ENST00000553488 TRAK1Q9UPV9 953 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms