RNA–Protein interactions for RNA: ENST00000553428.2

PCNX1-204, Transcript of pecanex 1, humanhuman

TSL 5

Gene PCNX1, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-204ENST00000553428 PCDH11XQ9BZA7 1347 aa11.25□□□□□ -0.61
PCNX1-204ENST00000553428 PCDH11YQ9BZA8 1340 aa11.25□□□□□ -0.61
PCNX1-204ENST00000553428 CC2D1BQ5T0F9 858 aaKnown RBP11.24□□□□□ -0.61
PCNX1-204ENST00000553428 IGSF1Q8N6C5 1336 aa11.24□□□□□ -0.61
PCNX1-204ENST00000553428 SPG7Q9UQ90 795 aa11.23□□□□□ -0.61
PCNX1-204ENST00000553428 MAP2P11137 1827 aaKnown RBP11.22□□□□□ -0.61
PCNX1-204ENST00000553428 MTHFSP49914 203 aa11.22□□□□□ -0.61
PCNX1-204ENST00000553428 NBPF14Q5TI25 921 aa11.22□□□□□ -0.61
PCNX1-204ENST00000553428 KCNQ2O43526 872 aa11.21□□□□□ -0.61
PCNX1-204ENST00000553428 PTF1AQ7RTS3 328 aa11.21□□□□□ -0.61
PCNX1-204ENST00000553428 ACSBG1Q96GR2 724 aa11.21□□□□□ -0.61
PCNX1-204ENST00000553428 RGPD3A6NKT7 1758 aaPredicted RBP11.21□□□□□ -0.62
PCNX1-204ENST00000553428 RGPD4Q7Z3J3 1758 aa11.21□□□□□ -0.62
PCNX1-204ENST00000553428 IL13P35225 146 aa11.2□□□□□ -0.62
PCNX1-204ENST00000553428 NKX1-1Q15270 411 aaPredicted RBP11.2□□□□□ -0.62
PCNX1-204ENST00000553428 NHSQ6T4R5 1651 aa11.2□□□□□ -0.62
PCNX1-204ENST00000553428 SBF2Q86WG5 1849 aa11.19□□□□□ -0.62
PCNX1-204ENST00000553428 RGPD2P0DJD1 1756 aa11.19□□□□□ -0.62
PCNX1-204ENST00000553428 CYP27B1O15528 508 aa11.19□□□□□ -0.62
PCNX1-204ENST00000553428 HMGB2P26583 209 aaKnown RBP11.19□□□□□ -0.62
PCNX1-204ENST00000553428 PRIM1P49642 420 aaKnown RBP11.19□□□□□ -0.62
PCNX1-204ENST00000553428 TXNRD1Q16881 649 aa11.19□□□□□ -0.62
PCNX1-204ENST00000553428 AMOTQ4VCS5 1084 aa11.19□□□□□ -0.62
PCNX1-204ENST00000553428 PLEKHO1Q53GL0 409 aaPredicted RBP11.19□□□□□ -0.62
PCNX1-204ENST00000553428 KDRP35968 1356 aa11.18□□□□□ -0.62
PCNX1-204ENST00000553428 DIAPH1O60610 1272 aaKnown RBP11.18□□□□□ -0.62
PCNX1-204ENST00000553428 IFNL2Q8IZJ0 200 aa11.18□□□□□ -0.62
PCNX1-204ENST00000553428 PROM2Q8N271 834 aa11.18□□□□□ -0.62
PCNX1-204ENST00000553428 SYTL4Q96C24 671 aaPredicted RBP11.18□□□□□ -0.62
PCNX1-204ENST00000553428 RREB1Q92766 1687 aa11.17□□□□□ -0.62
PCNX1-204ENST00000553428 HSP90AB1P08238 724 aaKnown RBP11.17□□□□□ -0.62
PCNX1-204ENST00000553428 R3HDM1Q15032 1099 aaKnown RBP11.17□□□□□ -0.62
PCNX1-204ENST00000553428 SLC27A3Q5K4L6 730 aa11.17□□□□□ -0.62
PCNX1-204ENST00000553428 CFAP53Q96M91 514 aa11.17□□□□□ -0.62
PCNX1-204ENST00000553428 PKD1L3Q7Z443 1732 aa11.17□□□□□ -0.62
PCNX1-204ENST00000553428 EP400Q96L91 3159 aa11.16□□□□□ -0.62
PCNX1-204ENST00000553428 PHKG2P15735 406 aa11.16□□□□□ -0.62
PCNX1-204ENST00000553428 SULT6B1Q6IMI4 303 aa11.16□□□□□ -0.62
PCNX1-204ENST00000553428 SHANK3Q9BYB0 1731 aa11.15□□□□□ -0.62
PCNX1-204ENST00000553428 PSDA5PKW4 1024 aaPredicted RBP11.15□□□□□ -0.62
PCNX1-204ENST00000553428 SMARCC1Q92922 1105 aaPredicted RBP11.15□□□□□ -0.62
PCNX1-204ENST00000553428 STK32BQ9NY57 414 aa11.15□□□□□ -0.62
PCNX1-204ENST00000553428 PPP2R1AP30153 589 aa11.14□□□□□ -0.63
PCNX1-204ENST00000553428 C1orf141Q5JVX7 400 aa11.14□□□□□ -0.63
PCNX1-204ENST00000553428 ZNF530Q6P9A1 599 aaPredicted RBP11.14□□□□□ -0.63
PCNX1-204ENST00000553428 AEBP1Q8IUX7 1158 aa11.14□□□□□ -0.63
PCNX1-204ENST00000553428 DCAF5Q96JK2 942 aa11.14□□□□□ -0.63
PCNX1-204ENST00000553428 NUDCQ9Y266 331 aa11.14□□□□□ -0.63
PCNX1-204ENST00000553428 NUP188Q5SRE5 1749 aa11.14□□□□□ -0.63
PCNX1-204ENST00000553428 COL3A1P02461 1466 aaPredicted RBP11.13□□□□□ -0.63
PCNX1-204ENST00000553428 ERVV-2B6SEH9 535 aa11.13□□□□□ -0.63
PCNX1-204ENST00000553428 CNGB1Q14028 1251 aaPredicted RBP11.13□□□□□ -0.63
PCNX1-204ENST00000553428 ANO8Q9HCE9 1232 aaPredicted RBP11.13□□□□□ -0.63
PCNX1-204ENST00000553428 DOT1LQ8TEK3 1739 aa11.12□□□□□ -0.63
PCNX1-204ENST00000553428 RALBP1Q15311 655 aa11.12□□□□□ -0.63
PCNX1-204ENST00000553428 SLC15A2Q16348 729 aa11.12□□□□□ -0.63
PCNX1-204ENST00000553428 MPRIPQ6WCQ1 1025 aa11.12□□□□□ -0.63
PCNX1-204ENST00000553428 PIGBQ92521 554 aa11.12□□□□□ -0.63
PCNX1-204ENST00000553428 TMOD3Q9NYL9 352 aa11.12□□□□□ -0.63
PCNX1-204ENST00000553428 BTAF1O14981 1849 aa11.12□□□□□ -0.63
PCNX1-204ENST00000553428 U2SURPO15042 1029 aaKnown RBP11.11□□□□□ -0.63
PCNX1-204ENST00000553428 HMOX1P09601 288 aa11.11□□□□□ -0.63
PCNX1-204ENST00000553428 AKAP4Q5JQC9 854 aa11.11□□□□□ -0.63
PCNX1-204ENST00000553428 LRRC4BQ9NT99 713 aa11.11□□□□□ -0.63
PCNX1-204ENST00000553428 CCNL1Q9UK58 526 aaPredicted RBP11.11□□□□□ -0.63
PCNX1-204ENST00000553428 PALLDQ8WX93 1383 aa11.11□□□□□ -0.63
PCNX1-204ENST00000553428 DDX10Q13206 875 aaKnown RBP11.1□□□□□ -0.63
PCNX1-204ENST00000553428 LRP5O75197 1615 aa11.09□□□□□ -0.63
PCNX1-204ENST00000553428 CABP4P57796 275 aa11.09□□□□□ -0.63
PCNX1-204ENST00000553428 GAS2L2Q8NHY3 880 aa11.09□□□□□ -0.63
PCNX1-204ENST00000553428 AKT1S1Q96B36 256 aa11.09□□□□□ -0.63
PCNX1-204ENST00000553428 PAPPAQ13219 1627 aa11.09□□□□□ -0.63
PCNX1-204ENST00000553428 FCHSD2O94868 740 aa11.08□□□□□ -0.64
PCNX1-204ENST00000553428 SPON1Q9HCB6 807 aa11.08□□□□□ -0.64
PCNX1-204ENST00000553428 KDM6AO15550 1401 aaPredicted RBP11.08□□□□□ -0.64
PCNX1-204ENST00000553428 TOGARAM1Q9Y4F4 1720 aa11.07□□□□□ -0.64
PCNX1-204ENST00000553428 LOC102724428A0A0B4J2F2 783 aa11.07□□□□□ -0.64
PCNX1-204ENST00000553428 U2AF1L5P0DN76 240 aaPredicted RBP11.07□□□□□ -0.64
PCNX1-204ENST00000553428 SIK1P57059 783 aa11.07□□□□□ -0.64
PCNX1-204ENST00000553428 U2AF1Q01081 240 aaKnown RBP eCLIP11.07□□□□□ -0.64
PCNX1-204ENST00000553428 ZNF827Q17R98 1081 aa11.07□□□□□ -0.64
PCNX1-204ENST00000553428 MTHFSDQ2M296 383 aaKnown RBP11.07□□□□□ -0.64
PCNX1-204ENST00000553428 SLC16A10Q8TF71 515 aa11.07□□□□□ -0.64
PCNX1-204ENST00000553428 ATG3Q9NT62 314 aa11.07□□□□□ -0.64
PCNX1-204ENST00000553428 KAT6BQ8WYB5 2073 aa11.07□□□□□ -0.64
PCNX1-204ENST00000553428 LY75O60449 1722 aa11.06□□□□□ -0.64
PCNX1-204ENST00000553428 RNMTO43148 476 aaKnown RBP11.06□□□□□ -0.64
PCNX1-204ENST00000553428 FLAD1Q8NFF5 587 aa11.06□□□□□ -0.64
PCNX1-204ENST00000553428 RSPH6AQ9H0K4 717 aa11.06□□□□□ -0.64
PCNX1-204ENST00000553428 TFCP2L1Q9NZI6 479 aa11.06□□□□□ -0.64
PCNX1-204ENST00000553428 ASAP1Q9ULH1 1129 aa11.06□□□□□ -0.64
PCNX1-204ENST00000553428 PRKAR2BP31323 418 aa11.05□□□□□ -0.64
PCNX1-204ENST00000553428 MTFR1LQ9H019 292 aa11.05□□□□□ -0.64
PCNX1-204ENST00000553428 PNNQ9H307 717 aaKnown RBP11.05□□□□□ -0.64
PCNX1-204ENST00000553428 SLC52A2Q9HAB3 445 aa11.05□□□□□ -0.64
PCNX1-204ENST00000553428 MYBBP1AQ9BQG0 1328 aaKnown RBP11.05□□□□□ -0.64
PCNX1-204ENST00000553428 GNAT3A8MTJ3 354 aa11.04□□□□□ -0.64
PCNX1-204ENST00000553428 NEFMP07197 916 aa11.04□□□□□ -0.64
PCNX1-204ENST00000553428 KCNQ4P56696 695 aa11.04□□□□□ -0.64
PCNX1-204ENST00000553428 NFATC2IPQ8NCF5 419 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms