RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 PKD1L3Q7Z443 1732 aa25■■□□□ 1.59
CPSF2-202ENST00000553427 BCL11BQ9C0K0 894 aaPredicted RBP24.99■■□□□ 1.59
CPSF2-202ENST00000553427 IL13P35225 146 aa24.98■■□□□ 1.59
CPSF2-202ENST00000553427 NHSQ6T4R5 1651 aa24.97■■□□□ 1.59
CPSF2-202ENST00000553427 COL3A1P02461 1466 aaPredicted RBP24.97■■□□□ 1.59
CPSF2-202ENST00000553427 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.97■■□□□ 1.599e-11■■□□□ 13.1
CPSF2-202ENST00000553427 KDRP35968 1356 aa24.96■■□□□ 1.59
CPSF2-202ENST00000553427 RGPD3A6NKT7 1758 aaPredicted RBP24.96■■□□□ 1.59
CPSF2-202ENST00000553427 RGPD4Q7Z3J3 1758 aa24.96■■□□□ 1.59
CPSF2-202ENST00000553427 PCDH11XQ9BZA7 1347 aa24.96■■□□□ 1.59
CPSF2-202ENST00000553427 PCDH11YQ9BZA8 1340 aa24.96■■□□□ 1.59
CPSF2-202ENST00000553427 APBA3O96018 575 aa24.95■■□□□ 1.58
CPSF2-202ENST00000553427 DDX54Q8TDD1 881 aaKnown RBP24.95■■□□□ 1.58
CPSF2-202ENST00000553427 CAMKK2Q96RR4 588 aa24.93■■□□□ 1.58
CPSF2-202ENST00000553427 EN1Q05925 392 aaPredicted RBP24.92■■□□□ 1.58
CPSF2-202ENST00000553427 DDX10Q13206 875 aaKnown RBP24.92■■□□□ 1.58
CPSF2-202ENST00000553427 CNGB1Q14028 1251 aaPredicted RBP24.92■■□□□ 1.58
CPSF2-202ENST00000553427 SPG7Q9UQ90 795 aa24.92■■□□□ 1.58
CPSF2-202ENST00000553427 DIAPH1O60610 1272 aaKnown RBP24.91■■□□□ 1.58
CPSF2-202ENST00000553427 PPP2R1AP30153 589 aa24.91■■□□□ 1.58
CPSF2-202ENST00000553427 PLSCR1O15162 318 aa24.9■■□□□ 1.58
CPSF2-202ENST00000553427 RREB1Q92766 1687 aa24.89■■□□□ 1.58
CPSF2-202ENST00000553427 CYP27B1O15528 508 aa24.89■■□□□ 1.58
CPSF2-202ENST00000553427 PTF1AQ7RTS3 328 aa24.89■■□□□ 1.58
CPSF2-202ENST00000553427 KCNQ2O43526 872 aa24.88■■□□□ 1.57
CPSF2-202ENST00000553427 AEBP1Q8IUX7 1158 aa24.88■■□□□ 1.57
CPSF2-202ENST00000553427 DOT1LQ8TEK3 1739 aa24.88■■□□□ 1.57
CPSF2-202ENST00000553427 EZH2Q15910 746 aaKnown RBP24.87■■□□□ 1.57
CPSF2-202ENST00000553427 SULT6B1Q6IMI4 303 aa24.87■■□□□ 1.57
CPSF2-202ENST00000553427 ACSBG1Q96GR2 724 aa24.87■■□□□ 1.57
CPSF2-202ENST00000553427 CFAP53Q96M91 514 aa24.87■■□□□ 1.57
CPSF2-202ENST00000553427 NKX1-1Q15270 411 aaPredicted RBP24.86■■□□□ 1.57
CPSF2-202ENST00000553427 AMOTQ4VCS5 1084 aa24.85■■□□□ 1.57
CPSF2-202ENST00000553427 BTAF1O14981 1849 aa24.84■■□□□ 1.57
CPSF2-202ENST00000553427 RALBP1Q15311 655 aa24.84■■□□□ 1.57
CPSF2-202ENST00000553427 PLEKHO1Q53GL0 409 aaPredicted RBP24.83■■□□□ 1.57
CPSF2-202ENST00000553427 PHKG2P15735 406 aa24.82■■□□□ 1.56
CPSF2-202ENST00000553427 NUP188Q5SRE5 1749 aa24.82■■□□□ 1.56
CPSF2-202ENST00000553427 IFNL2Q8IZJ0 200 aa24.82■■□□□ 1.56
CPSF2-202ENST00000553427 ZNF316A6NFI3 1004 aaPredicted RBP24.81■■□□□ 1.56
CPSF2-202ENST00000553427 PRIM1P49642 420 aaKnown RBP24.81■■□□□ 1.56
CPSF2-202ENST00000553427 TOGARAM1Q9Y4F4 1720 aa24.81■■□□□ 1.56
CPSF2-202ENST00000553427 HSP90AB1P08238 724 aaKnown RBP24.78■■□□□ 1.56
CPSF2-202ENST00000553427 NUDCQ9Y266 331 aa24.78■■□□□ 1.56
CPSF2-202ENST00000553427 HMOX1P09601 288 aa24.77■■□□□ 1.56
CPSF2-202ENST00000553427 ZNF530Q6P9A1 599 aaPredicted RBP24.77■■□□□ 1.56
CPSF2-202ENST00000553427 U2SURPO15042 1029 aaKnown RBP24.76■■□□□ 1.55
CPSF2-202ENST00000553427 PROM2Q8N271 834 aa24.76■■□□□ 1.55
CPSF2-202ENST00000553427 SYTL4Q96C24 671 aaPredicted RBP24.76■■□□□ 1.55
CPSF2-202ENST00000553427 KAT6BQ8WYB5 2073 aa24.75■■□□□ 1.55
CPSF2-202ENST00000553427 TXNRD1Q16881 649 aa24.75■■□□□ 1.55
CPSF2-202ENST00000553427 DCAF5Q96JK2 942 aa24.74■■□□□ 1.55
CPSF2-202ENST00000553427 MYBBP1AQ9BQG0 1328 aaKnown RBP24.74■■□□□ 1.55
CPSF2-202ENST00000553427 KDM6AO15550 1401 aaPredicted RBP24.72■■□□□ 1.55
CPSF2-202ENST00000553427 C1orf141Q5JVX7 400 aa24.72■■□□□ 1.55
CPSF2-202ENST00000553427 ITGB4P16144 1822 aa24.72■■□□□ 1.55
CPSF2-202ENST00000553427 SLC27A3Q5K4L6 730 aa24.71■■□□□ 1.55
CPSF2-202ENST00000553427 NBPF14Q5TI25 921 aa24.71■■□□□ 1.55
CPSF2-202ENST00000553427 RSPH6AQ9H0K4 717 aa24.71■■□□□ 1.55
CPSF2-202ENST00000553427 LY75O60449 1722 aa24.71■■□□□ 1.55
CPSF2-202ENST00000553427 ERVV-2B6SEH9 535 aa24.7■■□□□ 1.54
CPSF2-202ENST00000553427 AKAP4Q5JQC9 854 aa24.7■■□□□ 1.54
CPSF2-202ENST00000553427 PRKRIP1Q9H875 184 aaPredicted RBP24.7■■□□□ 1.54
CPSF2-202ENST00000553427 PAPPAQ13219 1627 aa24.7■■□□□ 1.54
CPSF2-202ENST00000553427 U2AF1L5P0DN76 240 aaPredicted RBP24.68■■□□□ 1.54
CPSF2-202ENST00000553427 U2AF1Q01081 240 aaKnown RBP eCLIP24.68■■□□□ 1.54
CPSF2-202ENST00000553427 MPRIPQ6WCQ1 1025 aa24.68■■□□□ 1.54
CPSF2-202ENST00000553427 PIGBQ92521 554 aa24.68■■□□□ 1.54
CPSF2-202ENST00000553427 TMOD3Q9NYL9 352 aa24.68■■□□□ 1.54
CPSF2-202ENST00000553427 ADAMTS7Q9UKP4 1686 aa24.67■■□□□ 1.54
CPSF2-202ENST00000553427 FCHSD2O94868 740 aa24.67■■□□□ 1.54
CPSF2-202ENST00000553427 MTHFSDQ2M296 383 aaKnown RBP24.67■■□□□ 1.54
CPSF2-202ENST00000553427 SMARCC1Q92922 1105 aaPredicted RBP24.67■■□□□ 1.54
CPSF2-202ENST00000553427 GAS2L2Q8NHY3 880 aa24.66■■□□□ 1.54
CPSF2-202ENST00000553427 PALLDQ8WX93 1383 aa24.66■■□□□ 1.54
CPSF2-202ENST00000553427 MRC1P22897 1456 aa24.65■■□□□ 1.54
CPSF2-202ENST00000553427 PRKAR2BP31323 418 aa24.65■■□□□ 1.54
CPSF2-202ENST00000553427 R3HDM1Q15032 1099 aaKnown RBP24.65■■□□□ 1.54
CPSF2-202ENST00000553427 ANO8Q9HCE9 1232 aaPredicted RBP24.65■■□□□ 1.54
CPSF2-202ENST00000553427 LRRC4BQ9NT99 713 aa24.64■■□□□ 1.54
CPSF2-202ENST00000553427 SCN11AQ9UI33 1791 aa24.64■■□□□ 1.53
CPSF2-202ENST00000553427 PSDA5PKW4 1024 aaPredicted RBP24.62■■□□□ 1.53
CPSF2-202ENST00000553427 HMGB2P26583 209 aaKnown RBP24.62■■□□□ 1.53
CPSF2-202ENST00000553427 CCNL1Q9UK58 526 aaPredicted RBP24.61■■□□□ 1.53
CPSF2-202ENST00000553427 MAP3K5Q99683 1374 aa24.61■■□□□ 1.53
CPSF2-202ENST00000553427 CABP4P57796 275 aa24.6■■□□□ 1.53
CPSF2-202ENST00000553427 PHACTR3Q96KR7 559 aa24.6■■□□□ 1.53
CPSF2-202ENST00000553427 STK32BQ9NY57 414 aa24.6■■□□□ 1.53
CPSF2-202ENST00000553427 SLC15A2Q16348 729 aa24.59■■□□□ 1.53
CPSF2-202ENST00000553427 RNMTO43148 476 aaKnown RBP24.58■■□□□ 1.53
CPSF2-202ENST00000553427 ATG3Q9NT62 314 aa24.58■■□□□ 1.53
CPSF2-202ENST00000553427 ASAP1Q9ULH1 1129 aa24.58■■□□□ 1.53
CPSF2-202ENST00000553427 SRCAPQ6ZRS2 3230 aa24.58■■□□□ 1.53
CPSF2-202ENST00000553427 GNAT3A8MTJ3 354 aa24.57■■□□□ 1.52
CPSF2-202ENST00000553427 ZNF831Q5JPB2 1677 aa24.56■■□□□ 1.52
CPSF2-202ENST00000553427 AKT1S1Q96B36 256 aa24.56■■□□□ 1.52
CPSF2-202ENST00000553427 PNNQ9H307 717 aaKnown RBP24.56■■□□□ 1.52
CPSF2-202ENST00000553427 SLC52A2Q9HAB3 445 aa24.56■■□□□ 1.52
CPSF2-202ENST00000553427 CASZ1Q86V15 1759 aa24.55■■□□□ 1.52
CPSF2-202ENST00000553427 LRP5O75197 1615 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms