RNA–Protein interactions for RNA: ENST00000553301.1

AL845552.2-201, humanhuman

TSL 4 BASIC

Gene AL845552.2, Length 553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL845552.2-201ENST00000553301 AMER1Q5JTC6 1135 aaPredicted RBP28.59■■■□□ 2.17
AL845552.2-201ENST00000553301 USHBP1Q8N6Y0 703 aa28.58■■■□□ 2.17
AL845552.2-201ENST00000553301 PLEKHG2Q9H7P9 1386 aa28.58■■■□□ 2.17
AL845552.2-201ENST00000553301 PCDH11XQ9BZA7 1347 aa28.56■■■□□ 2.16
AL845552.2-201ENST00000553301 PCDH11YQ9BZA8 1340 aa28.56■■■□□ 2.16
AL845552.2-201ENST00000553301 NPC1L1Q9UHC9 1359 aa28.55■■■□□ 2.16
AL845552.2-201ENST00000553301 PER1O15534 1290 aaPredicted RBP28.55■■■□□ 2.16
AL845552.2-201ENST00000553301 ACSBG1Q96GR2 724 aa28.54■■■□□ 2.16
AL845552.2-201ENST00000553301 NUP188Q5SRE5 1749 aa28.54■■■□□ 2.16
AL845552.2-201ENST00000553301 EYA1Q99502 592 aa28.53■■■□□ 2.16
AL845552.2-201ENST00000553301 KCNQ2O43526 872 aa28.52■■■□□ 2.16
AL845552.2-201ENST00000553301 EIF4A2Q14240 407 aaKnown RBP28.52■■■□□ 2.16
AL845552.2-201ENST00000553301 PTF1AQ7RTS3 328 aa28.52■■■□□ 2.16
AL845552.2-201ENST00000553301 R3HDM1Q15032 1099 aaKnown RBP28.51■■■□□ 2.15
AL845552.2-201ENST00000553301 PSDA5PKW4 1024 aaPredicted RBP28.5■■■□□ 2.15
AL845552.2-201ENST00000553301 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.5■■■□□ 2.15
AL845552.2-201ENST00000553301 SPG7Q9UQ90 795 aa28.5■■■□□ 2.15
AL845552.2-201ENST00000553301 SHANK3Q9BYB0 1731 aa28.49■■■□□ 2.15
AL845552.2-201ENST00000553301 TXNRD1Q16881 649 aa28.48■■■□□ 2.15
AL845552.2-201ENST00000553301 IGSF1Q8N6C5 1336 aa28.47■■■□□ 2.15
AL845552.2-201ENST00000553301 PKD1L3Q7Z443 1732 aa28.45■■■□□ 2.14
AL845552.2-201ENST00000553301 SYTL4Q96C24 671 aaPredicted RBP28.44■■■□□ 2.14
AL845552.2-201ENST00000553301 SRCAPQ6ZRS2 3230 aa28.44■■■□□ 2.14
AL845552.2-201ENST00000553301 BTAF1O14981 1849 aa28.43■■■□□ 2.14
AL845552.2-201ENST00000553301 PRIM1P49642 420 aaKnown RBP28.43■■■□□ 2.14
AL845552.2-201ENST00000553301 CC2D1BQ5T0F9 858 aaKnown RBP28.43■■■□□ 2.14
AL845552.2-201ENST00000553301 PROM2Q8N271 834 aa28.43■■■□□ 2.14
AL845552.2-201ENST00000553301 LRP5O75197 1615 aa28.43■■■□□ 2.14
AL845552.2-201ENST00000553301 DOT1LQ8TEK3 1739 aa28.42■■■□□ 2.14
AL845552.2-201ENST00000553301 HMGB2P26583 209 aaKnown RBP28.41■■■□□ 2.14
AL845552.2-201ENST00000553301 SLC27A3Q5K4L6 730 aa28.41■■■□□ 2.14
AL845552.2-201ENST00000553301 CYP27B1O15528 508 aa28.4■■■□□ 2.14
AL845552.2-201ENST00000553301 NKX1-1Q15270 411 aaPredicted RBP28.39■■■□□ 2.14
AL845552.2-201ENST00000553301 STK32BQ9NY57 414 aa28.39■■■□□ 2.14
AL845552.2-201ENST00000553301 KAT6BQ8WYB5 2073 aa28.39■■■□□ 2.13
AL845552.2-201ENST00000553301 MTHFSP49914 203 aa28.38■■■□□ 2.13
AL845552.2-201ENST00000553301 IFNL2Q8IZJ0 200 aa28.38■■■□□ 2.13
AL845552.2-201ENST00000553301 AMOTQ4VCS5 1084 aa28.37■■■□□ 2.13
AL845552.2-201ENST00000553301 IL13P35225 146 aa28.36■■■□□ 2.13
AL845552.2-201ENST00000553301 PLEKHO1Q53GL0 409 aaPredicted RBP28.35■■■□□ 2.13
AL845552.2-201ENST00000553301 ANO8Q9HCE9 1232 aaPredicted RBP28.35■■■□□ 2.13
AL845552.2-201ENST00000553301 KDRP35968 1356 aa28.35■■■□□ 2.13
AL845552.2-201ENST00000553301 HSP90AB1P08238 724 aaKnown RBP28.33■■■□□ 2.13
AL845552.2-201ENST00000553301 SLC15A2Q16348 729 aa28.33■■■□□ 2.13
AL845552.2-201ENST00000553301 PHKG2P15735 406 aa28.32■■■□□ 2.12
AL845552.2-201ENST00000553301 DIAPH1O60610 1272 aaKnown RBP28.31■■■□□ 2.12
AL845552.2-201ENST00000553301 SULT6B1Q6IMI4 303 aa28.3■■■□□ 2.12
AL845552.2-201ENST00000553301 SMARCC1Q92922 1105 aaPredicted RBP28.3■■■□□ 2.12
AL845552.2-201ENST00000553301 PAPPAQ13219 1627 aa28.29■■■□□ 2.12
AL845552.2-201ENST00000553301 MPRIPQ6WCQ1 1025 aa28.28■■■□□ 2.12
AL845552.2-201ENST00000553301 SPON1Q9HCB6 807 aa28.27■■■□□ 2.12
AL845552.2-201ENST00000553301 LY75O60449 1722 aa28.26■■■□□ 2.12
AL845552.2-201ENST00000553301 DCAF5Q96JK2 942 aa28.26■■■□□ 2.11
AL845552.2-201ENST00000553301 LRRC4BQ9NT99 713 aa28.26■■■□□ 2.11
AL845552.2-201ENST00000553301 CCNL1Q9UK58 526 aaPredicted RBP28.26■■■□□ 2.11
AL845552.2-201ENST00000553301 AEBP1Q8IUX7 1158 aa28.25■■■□□ 2.11
AL845552.2-201ENST00000553301 CFAP53Q96M91 514 aa28.25■■■□□ 2.11
AL845552.2-201ENST00000553301 TMOD3Q9NYL9 352 aa28.25■■■□□ 2.11
AL845552.2-201ENST00000553301 TOGARAM1Q9Y4F4 1720 aa28.24■■■□□ 2.11
AL845552.2-201ENST00000553301 C1orf141Q5JVX7 400 aa28.24■■■□□ 2.11
AL845552.2-201ENST00000553301 ZNF530Q6P9A1 599 aaPredicted RBP28.24■■■□□ 2.11
AL845552.2-201ENST00000553301 PALLDQ8WX93 1383 aa28.24■■■□□ 2.11
AL845552.2-201ENST00000553301 ERVV-2B6SEH9 535 aa28.23■■■□□ 2.11
AL845552.2-201ENST00000553301 CNGB1Q14028 1251 aaPredicted RBP28.23■■■□□ 2.11
AL845552.2-201ENST00000553301 ZEB1P37275 1124 aaPredicted RBP28.22■■■□□ 2.11
AL845552.2-201ENST00000553301 CASZ1Q86V15 1759 aa28.22■■■□□ 2.11
AL845552.2-201ENST00000553301 PIGBQ92521 554 aa28.21■■■□□ 2.11
AL845552.2-201ENST00000553301 AKT1S1Q96B36 256 aa28.21■■■□□ 2.11
AL845552.2-201ENST00000553301 COL3A1P02461 1466 aaPredicted RBP28.21■■■□□ 2.11
AL845552.2-201ENST00000553301 ITGB4P16144 1822 aa28.2■■■□□ 2.1
AL845552.2-201ENST00000553301 ZNF827Q17R98 1081 aa28.18■■■□□ 2.1
AL845552.2-201ENST00000553301 AKAP4Q5JQC9 854 aa28.16■■■□□ 2.1
AL845552.2-201ENST00000553301 MTFR1LQ9H019 292 aa28.16■■■□□ 2.1
AL845552.2-201ENST00000553301 TFCP2L1Q9NZI6 479 aa28.16■■■□□ 2.1
AL845552.2-201ENST00000553301 NUDCQ9Y266 331 aa28.16■■■□□ 2.1
AL845552.2-201ENST00000553301 HMOX1P09601 288 aa28.15■■■□□ 2.1
AL845552.2-201ENST00000553301 PPP2R1AP30153 589 aa28.15■■■□□ 2.1
AL845552.2-201ENST00000553301 SLC16A10Q8TF71 515 aa28.15■■■□□ 2.1
AL845552.2-201ENST00000553301 PPP1R1BQ9UD71 204 aaPredicted RBP28.15■■■□□ 2.1
AL845552.2-201ENST00000553301 QSER1Q2KHR3 1735 aa28.15■■■□□ 2.1
AL845552.2-201ENST00000553301 U2SURPO15042 1029 aaKnown RBP28.14■■■□□ 2.1
AL845552.2-201ENST00000553301 KDM6AO15550 1401 aaPredicted RBP28.13■■■□□ 2.09
AL845552.2-201ENST00000553301 CABP4P57796 275 aa28.13■■■□□ 2.09
AL845552.2-201ENST00000553301 LOC102724428A0A0B4J2F2 783 aa28.11■■■□□ 2.09
AL845552.2-201ENST00000553301 ZBTB7AO95365 584 aa28.11■■■□□ 2.09
AL845552.2-201ENST00000553301 KCNQ4P56696 695 aa28.11■■■□□ 2.09
AL845552.2-201ENST00000553301 SIK1P57059 783 aa28.11■■■□□ 2.09
AL845552.2-201ENST00000553301 C5P01031 1676 aa28.1■■■□□ 2.09
AL845552.2-201ENST00000553301 FLAD1Q8NFF5 587 aa28.1■■■□□ 2.09
AL845552.2-201ENST00000553301 PDGFDQ9GZP0 370 aaPredicted RBP28.1■■■□□ 2.09
AL845552.2-201ENST00000553301 PNPLA7Q6ZV29 1317 aa28.09■■■□□ 2.09
AL845552.2-201ENST00000553301 ATG3Q9NT62 314 aa28.08■■■□□ 2.09
AL845552.2-201ENST00000553301 ASAP1Q9ULH1 1129 aa28.08■■■□□ 2.09
AL845552.2-201ENST00000553301 GAS2L2Q8NHY3 880 aa28.07■■■□□ 2.08
AL845552.2-201ENST00000553301 MTHFSDQ2M296 383 aaKnown RBP28.05■■■□□ 2.08
AL845552.2-201ENST00000553301 AK7Q96M32 723 aa28.05■■■□□ 2.08
AL845552.2-201ENST00000553301 ATF5Q9Y2D1 282 aaPredicted RBP28.05■■■□□ 2.08
AL845552.2-201ENST00000553301 ATP6V1AP38606 617 aa28.04■■■□□ 2.08
AL845552.2-201ENST00000553301 PTGER2P43116 358 aa28.04■■■□□ 2.08
AL845552.2-201ENST00000553301 RALBP1Q15311 655 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms