RNA–Protein interactions for RNA: ENST00000553154.5

CALCOCO1-222, Transcript of calcium binding and coiled-coil domain 1, human

TSL 2

Gene CALCOCO1, Length 566 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO1-222	ENST00000553154	SBF2	Q86WG5	1849 aa		13.73	□□□□□ -0.21
CALCOCO1-222	ENST00000553154	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.72	□□□□□ -0.21
CALCOCO1-222	ENST00000553154	PTF1A	Q7RTS3	328 aa		13.72	□□□□□ -0.21
CALCOCO1-222	ENST00000553154	AEBP1	Q8IUX7	1158 aa		13.72	□□□□□ -0.21
CALCOCO1-222	ENST00000553154	ZCRB1	Q8TBF4	217 aa	Known RBP	13.71	□□□□□ -0.21
CALCOCO1-222	ENST00000553154	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
CALCOCO1-222	ENST00000553154	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.71	□□□□□ -0.22
CALCOCO1-222	ENST00000553154	RGPD4	Q7Z3J3	1758 aa		13.71	□□□□□ -0.22
CALCOCO1-222	ENST00000553154	TOGARAM1	Q9Y4F4	1720 aa		13.7	□□□□□ -0.22
CALCOCO1-222	ENST00000553154	CYP27B1	O15528	508 aa		13.7	□□□□□ -0.22
CALCOCO1-222	ENST00000553154	RAPGEF4	Q8WZA2	1011 aa		13.7	□□□□□ -0.22
CALCOCO1-222	ENST00000553154	TRIM37	O94972	964 aa		13.69	□□□□□ -0.22
CALCOCO1-222	ENST00000553154	TAT	P17735	454 aa	Predicted RBP	13.69	□□□□□ -0.22
CALCOCO1-222	ENST00000553154	RREB1	Q92766	1687 aa		13.69	□□□□□ -0.22
CALCOCO1-222	ENST00000553154	PCDH11X	Q9BZA7	1347 aa		13.68	□□□□□ -0.22
CALCOCO1-222	ENST00000553154	PCDH11Y	Q9BZA8	1340 aa		13.68	□□□□□ -0.22
CALCOCO1-222	ENST00000553154	DOT1L	Q8TEK3	1739 aa		13.68	□□□□□ -0.22
CALCOCO1-222	ENST00000553154	DIAPH1	O60610	1272 aa	Known RBP	13.68	□□□□□ -0.22
CALCOCO1-222	ENST00000553154	NKX1-1	Q15270	411 aa	Predicted RBP	13.68	□□□□□ -0.22
CALCOCO1-222	ENST00000553154	RALBP1	Q15311	655 aa		13.68	□□□□□ -0.22
CALCOCO1-222	ENST00000553154	DEFB132	Q7Z7B7	95 aa		13.68	□□□□□ -0.22
CALCOCO1-222	ENST00000553154	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.68	□□□□□ -0.22
CALCOCO1-222	ENST00000553154	CNGB1	Q14028	1251 aa	Predicted RBP	13.67	□□□□□ -0.22
CALCOCO1-222	ENST00000553154	CAMKK2	Q96RR4	588 aa		13.67	□□□□□ -0.22
CALCOCO1-222	ENST00000553154	ADAMTS7	Q9UKP4	1686 aa		13.66	□□□□□ -0.22
CALCOCO1-222	ENST00000553154	KCNQ2	O43526	872 aa		13.66	□□□□□ -0.22
CALCOCO1-222	ENST00000553154	SULT6B1	Q6IMI4	303 aa		13.66	□□□□□ -0.22
CALCOCO1-222	ENST00000553154	KDM6A	O15550	1401 aa	Predicted RBP	13.65	□□□□□ -0.22
CALCOCO1-222	ENST00000553154	PHKG2	P15735	406 aa		13.65	□□□□□ -0.22
CALCOCO1-222	ENST00000553154	DDX54	Q8TDD1	881 aa	Known RBP	13.65	□□□□□ -0.22
CALCOCO1-222	ENST00000553154	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.65	□□□□□ -0.22
CALCOCO1-222	ENST00000553154	SPG7	Q9UQ90	795 aa		13.64	□□□□□ -0.23
CALCOCO1-222	ENST00000553154	NUP188	Q5SRE5	1749 aa		13.64	□□□□□ -0.23
CALCOCO1-222	ENST00000553154	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.64	□□□□□ -0.23
CALCOCO1-222	ENST00000553154	BTAF1	O14981	1849 aa		13.63	□□□□□ -0.23
CALCOCO1-222	ENST00000553154	PLSCR1	O15162	318 aa		13.63	□□□□□ -0.23
CALCOCO1-222	ENST00000553154	BAG6	P46379	1132 aa		13.63	□□□□□ -0.23
CALCOCO1-222	ENST00000553154	EN1	Q05925	392 aa	Predicted RBP	13.63	□□□□□ -0.23
CALCOCO1-222	ENST00000553154	RSPH6A	Q9H0K4	717 aa		13.63	□□□□□ -0.23
CALCOCO1-222	ENST00000553154	LRP5	O75197	1615 aa		13.63	□□□□□ -0.23
CALCOCO1-222	ENST00000553154	PAPPA	Q13219	1627 aa		13.63	□□□□□ -0.23
CALCOCO1-222	ENST00000553154	MRC1	P22897	1456 aa		13.62	□□□□□ -0.23
CALCOCO1-222	ENST00000553154	APBA3	O96018	575 aa		13.62	□□□□□ -0.23
CALCOCO1-222	ENST00000553154	HMOX1	P09601	288 aa		13.62	□□□□□ -0.23
CALCOCO1-222	ENST00000553154	AMOT	Q4VCS5	1084 aa		13.62	□□□□□ -0.23
CALCOCO1-222	ENST00000553154	PROM2	Q8N271	834 aa		13.62	□□□□□ -0.23
CALCOCO1-222	ENST00000553154	CFAP53	Q96M91	514 aa		13.62	□□□□□ -0.23
CALCOCO1-222	ENST00000553154	SF3B2	Q13435	895 aa	Known RBP	13.61	□□□□□ -0.23
CALCOCO1-222	ENST00000553154	EZH2	Q15910	746 aa	Known RBP	13.61	□□□□□ -0.23
CALCOCO1-222	ENST00000553154	ACSBG1	Q96GR2	724 aa		13.61	□□□□□ -0.23
CALCOCO1-222	ENST00000553154	PRIM1	P49642	420 aa	Known RBP	13.6	□□□□□ -0.23
CALCOCO1-222	ENST00000553154	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.6	□□□□□ -0.23
CALCOCO1-222	ENST00000553154	IFNL2	Q8IZJ0	200 aa		13.6	□□□□□ -0.23
CALCOCO1-222	ENST00000553154	LY75	O60449	1722 aa		13.59	□□□□□ -0.23
CALCOCO1-222	ENST00000553154	MTHFSD	Q2M296	383 aa	Known RBP	13.59	□□□□□ -0.23
CALCOCO1-222	ENST00000553154	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.59	□□□□□ -0.23
CALCOCO1-222	ENST00000553154	U2SURP	O15042	1029 aa	Known RBP	13.58	□□□□□ -0.24
CALCOCO1-222	ENST00000553154	PHACTR3	Q96KR7	559 aa		13.58	□□□□□ -0.24
CALCOCO1-222	ENST00000553154	FCHSD2	O94868	740 aa		13.57	□□□□□ -0.24
CALCOCO1-222	ENST00000553154	PRKAR2B	P31323	418 aa		13.57	□□□□□ -0.24
CALCOCO1-222	ENST00000553154	DCAF5	Q96JK2	942 aa		13.57	□□□□□ -0.24
CALCOCO1-222	ENST00000553154	PLEKHF1	Q96S99	279 aa		13.57	□□□□□ -0.24
CALCOCO1-222	ENST00000553154	NUDC	Q9Y266	331 aa		13.57	□□□□□ -0.24
CALCOCO1-222	ENST00000553154	ITGB4	P16144	1822 aa		13.57	□□□□□ -0.24
CALCOCO1-222	ENST00000553154	TXNRD1	Q16881	649 aa		13.56	□□□□□ -0.24
CALCOCO1-222	ENST00000553154	AKAP4	Q5JQC9	854 aa		13.56	□□□□□ -0.24
CALCOCO1-222	ENST00000553154	PIGB	Q92521	554 aa		13.56	□□□□□ -0.24
CALCOCO1-222	ENST00000553154	SCN11A	Q9UI33	1791 aa		13.55	□□□□□ -0.24
CALCOCO1-222	ENST00000553154	ERVV-2	B6SEH9	535 aa		13.55	□□□□□ -0.24
CALCOCO1-222	ENST00000553154	HSP90AB1	P08238	724 aa	Known RBP	13.55	□□□□□ -0.24
CALCOCO1-222	ENST00000553154	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.55	□□□□□ -0.24
CALCOCO1-222	ENST00000553154	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
CALCOCO1-222	ENST00000553154	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.55	□□□□□ -0.24
CALCOCO1-222	ENST00000553154	LRRC4B	Q9NT99	713 aa		13.55	□□□□□ -0.24
CALCOCO1-222	ENST00000553154	CEMIP	Q8WUJ3	1361 aa		13.55	□□□□□ -0.24
CALCOCO1-222	ENST00000553154	CIC	Q96RK0	1608 aa	Predicted RBP	13.54	□□□□□ -0.24
CALCOCO1-222	ENST00000553154	PALLD	Q8WX93	1383 aa		13.54	□□□□□ -0.24
CALCOCO1-222	ENST00000553154	MAP3K5	Q99683	1374 aa		13.54	□□□□□ -0.24
CALCOCO1-222	ENST00000553154	ZNF831	Q5JPB2	1677 aa		13.53	□□□□□ -0.24
CALCOCO1-222	ENST00000553154	CCDC184	Q52MB2	194 aa		13.53	□□□□□ -0.24
CALCOCO1-222	ENST00000553154	RNMT	O43148	476 aa	Known RBP	13.52	□□□□□ -0.25
CALCOCO1-222	ENST00000553154	C1orf141	Q5JVX7	400 aa		13.52	□□□□□ -0.25
CALCOCO1-222	ENST00000553154	MPRIP	Q6WCQ1	1025 aa		13.52	□□□□□ -0.25
CALCOCO1-222	ENST00000553154	GAS2L2	Q8NHY3	880 aa		13.52	□□□□□ -0.25
CALCOCO1-222	ENST00000553154	SYTL4	Q96C24	671 aa	Predicted RBP	13.52	□□□□□ -0.25
CALCOCO1-222	ENST00000553154	LGR6	Q9HBX8	967 aa		13.52	□□□□□ -0.25
CALCOCO1-222	ENST00000553154	SIPA1L3	O60292	1781 aa	Predicted RBP	13.51	□□□□□ -0.25
CALCOCO1-222	ENST00000553154	SLC27A3	Q5K4L6	730 aa		13.51	□□□□□ -0.25
CALCOCO1-222	ENST00000553154	IL17RE	Q8NFR9	667 aa		13.51	□□□□□ -0.25
CALCOCO1-222	ENST00000553154	ATG3	Q9NT62	314 aa		13.51	□□□□□ -0.25
CALCOCO1-222	ENST00000553154	CASZ1	Q86V15	1759 aa		13.5	□□□□□ -0.25
CALCOCO1-222	ENST00000553154	KCP	Q6ZWJ8	1503 aa		13.5	□□□□□ -0.25
CALCOCO1-222	ENST00000553154	PSD	A5PKW4	1024 aa	Predicted RBP	13.5	□□□□□ -0.25
CALCOCO1-222	ENST00000553154	YY1	P25490	414 aa		13.5	□□□□□ -0.25
CALCOCO1-222	ENST00000553154	SLC4A9	Q96Q91	983 aa		13.5	□□□□□ -0.25
CALCOCO1-222	ENST00000553154	TMOD3	Q9NYL9	352 aa		13.5	□□□□□ -0.25
CALCOCO1-222	ENST00000553154	ASAP1	Q9ULH1	1129 aa		13.5	□□□□□ -0.25
CALCOCO1-222	ENST00000553154	ZNF827	Q17R98	1081 aa		13.49	□□□□□ -0.25
CALCOCO1-222	ENST00000553154	AKT1S1	Q96B36	256 aa		13.49	□□□□□ -0.25
CALCOCO1-222	ENST00000553154	SLC52A2	Q9HAB3	445 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms