RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 MRPL50Q8N5N7 158 aaKnown RBP11.57□□□□□ -0.56
RAB3IP-218ENST00000553099 DDX17Q92841 729 aaKnown RBP11.57□□□□□ -0.56
RAB3IP-218ENST00000553099 TRPM3Q9HCF6 1732 aaPredicted RBP11.57□□□□□ -0.56
RAB3IP-218ENST00000553099 BACH2Q9BYV9 841 aa11.56□□□□□ -0.56
RAB3IP-218ENST00000553099 ANP32AP39687 249 aaKnown RBP11.56□□□□□ -0.56
RAB3IP-218ENST00000553099 TSPYL4Q9UJ04 414 aa11.56□□□□□ -0.56
RAB3IP-218ENST00000553099 CHL1O00533 1208 aa11.55□□□□□ -0.56
RAB3IP-218ENST00000553099 RWDD1Q9H446 243 aaPredicted RBP11.55□□□□□ -0.56
RAB3IP-218ENST00000553099 LRRC59Q96AG4 307 aaKnown RBP11.55□□□□□ -0.56
RAB3IP-218ENST00000553099 MST1RQ04912 1400 aa11.55□□□□□ -0.56
RAB3IP-218ENST00000553099 CRB1P82279 1406 aa11.54□□□□□ -0.56
RAB3IP-218ENST00000553099 GNAT3A8MTJ3 354 aa11.54□□□□□ -0.56
RAB3IP-218ENST00000553099 NBPF6Q5VWK0 638 aa11.54□□□□□ -0.56
RAB3IP-218ENST00000553099 NBPF4Q96M43 638 aa11.54□□□□□ -0.56
RAB3IP-218ENST00000553099 MSH5O43196 834 aa11.53□□□□□ -0.56
RAB3IP-218ENST00000553099 BRPF1P55201 1214 aaPredicted RBP11.53□□□□□ -0.56
RAB3IP-218ENST00000553099 RGPD5Q99666 1765 aa11.53□□□□□ -0.56
RAB3IP-218ENST00000553099 MSH6P52701 1360 aa11.53□□□□□ -0.56
RAB3IP-218ENST00000553099 MAP3K5Q99683 1374 aa11.53□□□□□ -0.56
RAB3IP-218ENST00000553099 KDM4FA0A1W2PPD8 638 aa11.53□□□□□ -0.56
RAB3IP-218ENST00000553099 HAP1P54257 671 aaPredicted RBP11.53□□□□□ -0.56
RAB3IP-218ENST00000553099 ZC3H6P61129 1189 aaKnown RBP11.53□□□□□ -0.56
RAB3IP-218ENST00000553099 CADPS2Q86UW7 1296 aa11.53□□□□□ -0.56
RAB3IP-218ENST00000553099 SLIT3O75094 1523 aa11.53□□□□□ -0.56
RAB3IP-218ENST00000553099 PHRF1Q9P1Y6 1649 aaKnown RBP11.53□□□□□ -0.56
RAB3IP-218ENST00000553099 ARHGEF25Q86VW2 580 aa11.53□□□□□ -0.56
RAB3IP-218ENST00000553099 ARHGAP45Q92619 1136 aa11.52□□□□□ -0.57
RAB3IP-218ENST00000553099 LMTK3Q96Q04 1460 aa11.52□□□□□ -0.57
RAB3IP-218ENST00000553099 DCCP43146 1447 aa11.52□□□□□ -0.57
RAB3IP-218ENST00000553099 STRCQ7RTU9 1775 aa11.52□□□□□ -0.57
RAB3IP-218ENST00000553099 ALS2Q96Q42 1657 aa11.52□□□□□ -0.57
RAB3IP-218ENST00000553099 ERICH6Q7L0X2 663 aa11.52□□□□□ -0.57
RAB3IP-218ENST00000553099 ZBTB40Q9NUA8 1239 aa11.52□□□□□ -0.57
RAB3IP-218ENST00000553099 XIRP1Q702N8 1843 aaKnown RBP11.51□□□□□ -0.57
RAB3IP-218ENST00000553099 KIAA0232Q92628 1395 aa11.51□□□□□ -0.57
RAB3IP-218ENST00000553099 USP19O94966 1318 aa11.51□□□□□ -0.57
RAB3IP-218ENST00000553099 ANKRD24Q8TF21 1146 aa11.51□□□□□ -0.57
RAB3IP-218ENST00000553099 PDZRN3Q9UPQ7 1066 aa11.51□□□□□ -0.57
RAB3IP-218ENST00000553099 LRRC37A3O60309 1634 aa11.51□□□□□ -0.57
RAB3IP-218ENST00000553099 FAM161AQ3B820 660 aa11.51□□□□□ -0.57
RAB3IP-218ENST00000553099 API5Q9BZZ5 524 aaKnown RBP11.51□□□□□ -0.57
RAB3IP-218ENST00000553099 C1orf115Q9H7X2 142 aa11.51□□□□□ -0.57
RAB3IP-218ENST00000553099 ABCC4O15439 1325 aa11.5□□□□□ -0.57
RAB3IP-218ENST00000553099 NPHP3Q7Z494 1330 aa11.5□□□□□ -0.57
RAB3IP-218ENST00000553099 HTATSF1O43719 755 aaKnown RBP11.5□□□□□ -0.57
RAB3IP-218ENST00000553099 IL17REQ8NFR9 667 aa11.5□□□□□ -0.57
RAB3IP-218ENST00000553099 AXIN2Q9Y2T1 843 aa11.5□□□□□ -0.57
RAB3IP-218ENST00000553099 CABLES1Q8TDN4 633 aa11.5□□□□□ -0.57
RAB3IP-218ENST00000553099 NCOA3Q9Y6Q9 1424 aa11.49□□□□□ -0.57
RAB3IP-218ENST00000553099 SLC4A2P04920 1241 aa11.49□□□□□ -0.57
RAB3IP-218ENST00000553099 C8orf34Q49A92 452 aa11.49□□□□□ -0.57
RAB3IP-218ENST00000553099 MED1Q15648 1581 aaPredicted RBP11.49□□□□□ -0.57
RAB3IP-218ENST00000553099 NECTIN2Q92692 538 aa11.49□□□□□ -0.57
RAB3IP-218ENST00000553099 VIRMAQ69YN4 1812 aaKnown RBP11.48□□□□□ -0.57
RAB3IP-218ENST00000553099 ZNF335Q9H4Z2 1342 aaPredicted RBP11.48□□□□□ -0.57
RAB3IP-218ENST00000553099 ZBTB7BO15156 539 aaPredicted RBP11.48□□□□□ -0.57
RAB3IP-218ENST00000553099 HDAC1Q13547 482 aaPredicted RBP11.48□□□□□ -0.57
RAB3IP-218ENST00000553099 ZNF530Q6P9A1 599 aaPredicted RBP11.48□□□□□ -0.57
RAB3IP-218ENST00000553099 CHMP4BQ9H444 224 aaKnown RBP11.48□□□□□ -0.57
RAB3IP-218ENST00000553099 TAF7Q15545 349 aaPredicted RBP11.47□□□□□ -0.57
RAB3IP-218ENST00000553099 PLEKHO1Q53GL0 409 aaPredicted RBP11.47□□□□□ -0.57
RAB3IP-218ENST00000553099 IPO9Q96P70 1041 aaKnown RBP11.47□□□□□ -0.57
RAB3IP-218ENST00000553099 STK31Q9BXU1 1019 aa11.47□□□□□ -0.57
RAB3IP-218ENST00000553099 TNS3Q68CZ2 1445 aa11.47□□□□□ -0.57
RAB3IP-218ENST00000553099 LGR6Q9HBX8 967 aa11.46□□□□□ -0.57
RAB3IP-218ENST00000553099 ERBB3P21860 1342 aa11.46□□□□□ -0.57
RAB3IP-218ENST00000553099 CHRNA2Q15822 529 aa11.46□□□□□ -0.58
RAB3IP-218ENST00000553099 C1orf141Q5JVX7 400 aa11.46□□□□□ -0.58
RAB3IP-218ENST00000553099 MPRIPQ6WCQ1 1025 aa11.46□□□□□ -0.58
RAB3IP-218ENST00000553099 NLRP2Q9NX02 1062 aa11.46□□□□□ -0.58
RAB3IP-218ENST00000553099 FAM208AQ9UK61 1670 aaKnown RBP11.46□□□□□ -0.58
RAB3IP-218ENST00000553099 CSB-PGBD3P0DP91 1061 aa11.45□□□□□ -0.58
RAB3IP-218ENST00000553099 TEFQ10587 303 aa11.45□□□□□ -0.58
RAB3IP-218ENST00000553099 SLC4A10Q6U841 1118 aa11.45□□□□□ -0.58
RAB3IP-218ENST00000553099 PTPRCP08575 1304 aa11.45□□□□□ -0.58
RAB3IP-218ENST00000553099 RGS12O14924 1447 aa11.45□□□□□ -0.58
RAB3IP-218ENST00000553099 LMO7Q8WWI1 1683 aa11.45□□□□□ -0.58
RAB3IP-218ENST00000553099 PXDNQ92626 1479 aa11.45□□□□□ -0.58
RAB3IP-218ENST00000553099 BRINP3Q76B58 766 aa11.45□□□□□ -0.58
RAB3IP-218ENST00000553099 G2E3Q7L622 706 aa11.45□□□□□ -0.58
RAB3IP-218ENST00000553099 AMOTQ4VCS5 1084 aa11.44□□□□□ -0.58
RAB3IP-218ENST00000553099 AKAP4Q5JQC9 854 aa11.44□□□□□ -0.58
RAB3IP-218ENST00000553099 NOP58Q9Y2X3 529 aaKnown RBP11.44□□□□□ -0.58
RAB3IP-218ENST00000553099 CACNA1FO60840 1977 aa11.44□□□□□ -0.58
RAB3IP-218ENST00000553099 F6X3S4 739 aa11.44□□□□□ -0.58
RAB3IP-218ENST00000553099 CCDC30Q5VVM6 783 aa11.44□□□□□ -0.58
RAB3IP-218ENST00000553099 SMC5Q8IY18 1101 aa11.44□□□□□ -0.58
RAB3IP-218ENST00000553099 BCL11AQ9H165 835 aa11.44□□□□□ -0.58
RAB3IP-218ENST00000553099 CEMIPQ8WUJ3 1361 aa11.44□□□□□ -0.58
RAB3IP-218ENST00000553099 SPATA31A3Q5VYP0 1347 aa11.43□□□□□ -0.58
RAB3IP-218ENST00000553099 CAMTA1Q9Y6Y1 1673 aa11.43□□□□□ -0.58
RAB3IP-218ENST00000553099 FKBP5Q13451 457 aaPredicted RBP11.43□□□□□ -0.58
RAB3IP-218ENST00000553099 INTS3Q68E01 1043 aaKnown RBP11.43□□□□□ -0.58
RAB3IP-218ENST00000553099 RAPGEF4Q8WZA2 1011 aa11.43□□□□□ -0.58
RAB3IP-218ENST00000553099 LNPKQ9C0E8 428 aa11.43□□□□□ -0.58
RAB3IP-218ENST00000553099 ZBTB47Q9UFB7 747 aaPredicted RBP11.43□□□□□ -0.58
RAB3IP-218ENST00000553099 BTBD11A6QL63 1104 aa11.42□□□□□ -0.58
RAB3IP-218ENST00000553099 EIF2S2P20042 333 aaKnown RBP11.42□□□□□ -0.58
RAB3IP-218ENST00000553099 HDGFL1Q5TGJ6 251 aa11.42□□□□□ -0.58
RAB3IP-218ENST00000553099 SLAIN2Q9P270 581 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms