RNA–Protein interactions for RNA: ENST00000553043.1

LETMD1-236, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-236ENST00000553043 ARHGEF28Q8N1W1 1705 aaKnown RBP9.85□□□□□ -0.83
LETMD1-236ENST00000553043 ARHGAP27Q6ZUM4 889 aa9.84□□□□□ -0.83
LETMD1-236ENST00000553043 BCS1LQ9Y276 419 aa9.84□□□□□ -0.83
LETMD1-236ENST00000553043 TRPM1Q7Z4N2 1603 aa9.84□□□□□ -0.83
LETMD1-236ENST00000553043 QSER1Q2KHR3 1735 aa9.84□□□□□ -0.83
LETMD1-236ENST00000553043 ERBB3P21860 1342 aa9.83□□□□□ -0.84
LETMD1-236ENST00000553043 SMIM5Q71RC9 77 aa9.83□□□□□ -0.84
LETMD1-236ENST00000553043 FLAD1Q8NFF5 587 aa9.83□□□□□ -0.84
LETMD1-236ENST00000553043 STAC3Q96MF2 364 aa9.83□□□□□ -0.84
LETMD1-236ENST00000553043 KAT6BQ8WYB5 2073 aa9.83□□□□□ -0.84
LETMD1-236ENST00000553043 TTC21BQ7Z4L5 1316 aa9.82□□□□□ -0.84
LETMD1-236ENST00000553043 FAM161AQ3B820 660 aa9.82□□□□□ -0.84
LETMD1-236ENST00000553043 ANKRD24Q8TF21 1146 aa9.82□□□□□ -0.84
LETMD1-236ENST00000553043 RRAGCQ9HB90 399 aa9.82□□□□□ -0.84
LETMD1-236ENST00000553043 ANKRD36BQ8N2N9 1353 aa9.82□□□□□ -0.84
LETMD1-236ENST00000553043 TUBGCP6Q96RT7 1819 aa9.82□□□□□ -0.84
LETMD1-236ENST00000553043 USP47Q96K76 1375 aa9.81□□□□□ -0.84
LETMD1-236ENST00000553043 PHF14O94880 888 aa9.81□□□□□ -0.84
LETMD1-236ENST00000553043 C9orf131Q5VYM1 1079 aa9.81□□□□□ -0.84
LETMD1-236ENST00000553043 SMC1BQ8NDV3 1235 aa9.81□□□□□ -0.84
LETMD1-236ENST00000553043 NSD2O96028 1365 aa9.8□□□□□ -0.84
LETMD1-236ENST00000553043 AMIGO3Q86WK7 504 aa9.8□□□□□ -0.84
LETMD1-236ENST00000553043 DAXXQ9UER7 740 aaPredicted RBP9.8□□□□□ -0.84
LETMD1-236ENST00000553043 KDM2BQ8NHM5 1336 aa9.8□□□□□ -0.84
LETMD1-236ENST00000553043 RGPD5Q99666 1765 aa9.79□□□□□ -0.84
LETMD1-236ENST00000553043 A0A0G2JLW4 131 aa9.79□□□□□ -0.84
LETMD1-236ENST00000553043 PIK3C2AO00443 1686 aa9.78□□□□□ -0.84
LETMD1-236ENST00000553043 FCHSD2O94868 740 aa9.78□□□□□ -0.84
LETMD1-236ENST00000553043 LTV1Q96GA3 475 aaPredicted RBP9.78□□□□□ -0.84
LETMD1-236ENST00000553043 AK7Q96M32 723 aa9.78□□□□□ -0.84
LETMD1-236ENST00000553043 ZNF692Q9BU19 519 aaPredicted RBP9.78□□□□□ -0.84
LETMD1-236ENST00000553043 CENPJQ9HC77 1338 aaPredicted RBP9.78□□□□□ -0.84
LETMD1-236ENST00000553043 KCPQ6ZWJ8 1503 aa9.77□□□□□ -0.84
LETMD1-236ENST00000553043 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.77□□□□□ -0.85
LETMD1-236ENST00000553043 NBPF1Q3BBV0 1214 aa9.77□□□□□ -0.85
LETMD1-236ENST00000553043 CICQ96RK0 1608 aaPredicted RBP9.77□□□□□ -0.85
LETMD1-236ENST00000553043 TTC21AQ8NDW8 1320 aa9.77□□□□□ -0.85
LETMD1-236ENST00000553043 NFAT5O94916 1531 aa9.77□□□□□ -0.85
LETMD1-236ENST00000553043 TGFB2P61812 414 aa9.76□□□□□ -0.85
LETMD1-236ENST00000553043 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.76□□□□□ -0.85
LETMD1-236ENST00000553043 ZCRB1Q8TBF4 217 aaKnown RBP9.76□□□□□ -0.85
LETMD1-236ENST00000553043 RNF181Q9P0P0 153 aa9.76□□□□□ -0.85
LETMD1-236ENST00000553043 PLEKHG2Q9H7P9 1386 aa9.75□□□□□ -0.85
LETMD1-236ENST00000553043 PXDNLA1KZ92 1463 aa9.75□□□□□ -0.85
LETMD1-236ENST00000553043 FOXN1O15353 648 aa9.75□□□□□ -0.85
LETMD1-236ENST00000553043 MMP10P09238 476 aa9.75□□□□□ -0.85
LETMD1-236ENST00000553043 DPEP1P16444 411 aa9.75□□□□□ -0.85
LETMD1-236ENST00000553043 HMGB2P26583 209 aaKnown RBP9.74□□□□□ -0.85
LETMD1-236ENST00000553043 PRDM10Q9NQV6 1147 aa9.74□□□□□ -0.85
LETMD1-236ENST00000553043 MKRN1Q9UHC7 482 aaKnown RBP9.74□□□□□ -0.85
LETMD1-236ENST00000553043 PALLDQ8WX93 1383 aa9.74□□□□□ -0.85
LETMD1-236ENST00000553043 LY75O60449 1722 aa9.73□□□□□ -0.85
LETMD1-236ENST00000553043 MLLT1Q03111 559 aaPredicted RBP9.73□□□□□ -0.85
LETMD1-236ENST00000553043 MPRIPQ6WCQ1 1025 aa9.73□□□□□ -0.85
LETMD1-236ENST00000553043 NME9Q86XW9 330 aa9.73□□□□□ -0.85
LETMD1-236ENST00000553043 ABHD8Q96I13 439 aa9.73□□□□□ -0.85
LETMD1-236ENST00000553043 PCNTO95613 3336 aa9.73□□□□□ -0.85
LETMD1-236ENST00000553043 SSFA2P28290 1259 aa9.72□□□□□ -0.85
LETMD1-236ENST00000553043 KTN1Q86UP2 1357 aaKnown RBP9.72□□□□□ -0.85
LETMD1-236ENST00000553043 C10orf71Q711Q0 1435 aa9.72□□□□□ -0.85
LETMD1-236ENST00000553043 CTCFP49711 727 aaPredicted RBP9.71□□□□□ -0.86
LETMD1-236ENST00000553043 AIDAQ96BJ3 306 aa9.71□□□□□ -0.86
LETMD1-236ENST00000553043 EVC2Q86UK5 1308 aa9.71□□□□□ -0.86
LETMD1-236ENST00000553043 QRICH2Q9H0J4 1663 aa9.71□□□□□ -0.86
LETMD1-236ENST00000553043 DOT1LQ8TEK3 1739 aa9.7□□□□□ -0.86
LETMD1-236ENST00000553043 GNPATO15228 680 aa9.7□□□□□ -0.86
LETMD1-236ENST00000553043 VEGFAP15692 232 aaPredicted RBP9.7□□□□□ -0.86
LETMD1-236ENST00000553043 LBX1P52954 281 aa9.7□□□□□ -0.86
LETMD1-236ENST00000553043 IP6K1Q92551 441 aa9.7□□□□□ -0.86
LETMD1-236ENST00000553043 CCDC87Q9NVE4 849 aa9.7□□□□□ -0.86
LETMD1-236ENST00000553043 CCDC85CA6NKD9 419 aa9.69□□□□□ -0.86
LETMD1-236ENST00000553043 C5P01031 1676 aa9.69□□□□□ -0.86
LETMD1-236ENST00000553043 KCNA3P22001 575 aa9.69□□□□□ -0.86
LETMD1-236ENST00000553043 DALRD3Q5D0E6 543 aaKnown RBP9.69□□□□□ -0.86
LETMD1-236ENST00000553043 USP31Q70CQ4 1352 aa9.69□□□□□ -0.86
LETMD1-236ENST00000553043 LINC00116Q8NCU8 138 aa9.69□□□□□ -0.86
LETMD1-236ENST00000553043 SMARCC1Q92922 1105 aaPredicted RBP9.69□□□□□ -0.86
LETMD1-236ENST00000553043 NSD3Q9BZ95 1437 aa9.69□□□□□ -0.86
LETMD1-236ENST00000553043 PIM2Q9P1W9 311 aa9.69□□□□□ -0.86
LETMD1-236ENST00000553043 MEGF6O75095 1541 aa9.68□□□□□ -0.86
LETMD1-236ENST00000553043 TMF1P82094 1093 aa9.68□□□□□ -0.86
LETMD1-236ENST00000553043 NLGN1Q8N2Q7 840 aa9.68□□□□□ -0.86
LETMD1-236ENST00000553043 DCAF5Q96JK2 942 aa9.68□□□□□ -0.86
LETMD1-236ENST00000553043 CREBZFQ9NS37 354 aa9.68□□□□□ -0.86
LETMD1-236ENST00000553043 USP54Q70EL1 1684 aa9.67□□□□□ -0.86
LETMD1-236ENST00000553043 GLTPD2A6NH11 291 aa9.67□□□□□ -0.86
LETMD1-236ENST00000553043 USHBP1Q8N6Y0 703 aa9.67□□□□□ -0.86
LETMD1-236ENST00000553043 PARP3Q9Y6F1 533 aa9.67□□□□□ -0.86
LETMD1-236ENST00000553043 C4BP0C0L5 1744 aa9.67□□□□□ -0.86
LETMD1-236ENST00000553043 N4BP2Q86UW6 1770 aaPredicted RBP9.66□□□□□ -0.86
LETMD1-236ENST00000553043 LOC102724428A0A0B4J2F2 783 aa9.66□□□□□ -0.86
LETMD1-236ENST00000553043 SIK1P57059 783 aa9.66□□□□□ -0.86
LETMD1-236ENST00000553043 RASSF7Q02833 373 aa9.66□□□□□ -0.86
LETMD1-236ENST00000553043 TRAPPC3LQ5T215 181 aa9.66□□□□□ -0.86
LETMD1-236ENST00000553043 PIGBQ92521 554 aa9.66□□□□□ -0.86
LETMD1-236ENST00000553043 RAB3GAP2Q9H2M9 1393 aa9.65□□□□□ -0.86
LETMD1-236ENST00000553043 FBLN1P23142 703 aa9.65□□□□□ -0.86
LETMD1-236ENST00000553043 ATP6V1AP38606 617 aa9.65□□□□□ -0.86
LETMD1-236ENST00000553043 AMPHP49418 695 aa9.65□□□□□ -0.86
LETMD1-236ENST00000553043 RGS19P49795 217 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms