RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 NCAPD2Q15021 1401 aa13.73□□□□□ -0.21
TRAFD1-208ENST00000552890 MYBBP1AQ9BQG0 1328 aaKnown RBP13.72□□□□□ -0.21
TRAFD1-208ENST00000552890 IL13P35225 146 aa13.72□□□□□ -0.21
TRAFD1-208ENST00000552890 PEAK1Q9H792 1746 aa13.72□□□□□ -0.21
TRAFD1-208ENST00000552890 ANP32CO43423 234 aa13.71□□□□□ -0.21
TRAFD1-208ENST00000552890 BCL11BQ9C0K0 894 aaPredicted RBP13.71□□□□□ -0.21
TRAFD1-208ENST00000552890 KDRP35968 1356 aa13.71□□□□□ -0.22
TRAFD1-208ENST00000552890 BRWD3Q6RI45 1802 aa13.7□□□□□ -0.22
TRAFD1-208ENST00000552890 WNK3Q9BYP7 1800 aa13.7□□□□□ -0.22
TRAFD1-208ENST00000552890 CNGB1Q14028 1251 aaPredicted RBP13.7□□□□□ -0.22
TRAFD1-208ENST00000552890 C1orf141Q5JVX7 400 aa13.7□□□□□ -0.22
TRAFD1-208ENST00000552890 IFNL2Q8IZJ0 200 aa13.7□□□□□ -0.22
TRAFD1-208ENST00000552890 DDX54Q8TDD1 881 aaKnown RBP13.7□□□□□ -0.22
TRAFD1-208ENST00000552890 U2SURPO15042 1029 aaKnown RBP13.69□□□□□ -0.22
TRAFD1-208ENST00000552890 FCHSD2O94868 740 aa13.69□□□□□ -0.22
TRAFD1-208ENST00000552890 SULT6B1Q6IMI4 303 aa13.69□□□□□ -0.22
TRAFD1-208ENST00000552890 MARCH10Q8NA82 808 aaPredicted RBP13.69□□□□□ -0.22
TRAFD1-208ENST00000552890 LRRC37A3O60309 1634 aa13.68□□□□□ -0.22
TRAFD1-208ENST00000552890 USHBP1Q8N6Y0 703 aa13.68□□□□□ -0.22
TRAFD1-208ENST00000552890 PRKRIP1Q9H875 184 aaPredicted RBP13.68□□□□□ -0.22
TRAFD1-208ENST00000552890 PLSCR1O15162 318 aa13.67□□□□□ -0.22
TRAFD1-208ENST00000552890 NKX1-1Q15270 411 aaPredicted RBP13.67□□□□□ -0.22
TRAFD1-208ENST00000552890 GAS2L2Q8NHY3 880 aa13.67□□□□□ -0.22
TRAFD1-208ENST00000552890 RGPD1P0DJD0 1748 aa13.67□□□□□ -0.22
TRAFD1-208ENST00000552890 TRIM37O94972 964 aa13.66□□□□□ -0.22
TRAFD1-208ENST00000552890 U2AF1L5P0DN76 240 aaPredicted RBP13.66□□□□□ -0.22
TRAFD1-208ENST00000552890 U2AF1Q01081 240 aaKnown RBP eCLIP13.66□□□□□ -0.22
TRAFD1-208ENST00000552890 DCAF5Q96JK2 942 aa13.66□□□□□ -0.22
TRAFD1-208ENST00000552890 MEGF6O75095 1541 aa13.65□□□□□ -0.22
TRAFD1-208ENST00000552890 APBA3O96018 575 aa13.65□□□□□ -0.22
TRAFD1-208ENST00000552890 SMARCC1Q92922 1105 aaPredicted RBP13.65□□□□□ -0.22
TRAFD1-208ENST00000552890 ERVV-2B6SEH9 535 aa13.64□□□□□ -0.23
TRAFD1-208ENST00000552890 WDR43Q15061 677 aaKnown RBP eCLIP13.64□□□□□ -0.23
TRAFD1-208ENST00000552890 AKAP4Q5JQC9 854 aa13.64□□□□□ -0.23
TRAFD1-208ENST00000552890 ZNF530Q6P9A1 599 aaPredicted RBP13.64□□□□□ -0.23
TRAFD1-208ENST00000552890 NBPF14Q5TI25 921 aa13.63□□□□□ -0.23
TRAFD1-208ENST00000552890 KAT6BQ8WYB5 2073 aa13.62□□□□□ -0.23
TRAFD1-208ENST00000552890 PHKG2P15735 406 aa13.62□□□□□ -0.23
TRAFD1-208ENST00000552890 RGPD2P0DJD1 1756 aa13.62□□□□□ -0.23
TRAFD1-208ENST00000552890 MAPK8IP3Q9UPT6 1336 aa13.62□□□□□ -0.23
TRAFD1-208ENST00000552890 PKD1L3Q7Z443 1732 aa13.61□□□□□ -0.23
TRAFD1-208ENST00000552890 COL3A1P02461 1466 aaPredicted RBP13.61□□□□□ -0.23
TRAFD1-208ENST00000552890 CYP27B1O15528 508 aa13.61□□□□□ -0.23
TRAFD1-208ENST00000552890 HTATSF1O43719 755 aaKnown RBP13.61□□□□□ -0.23
TRAFD1-208ENST00000552890 HMOX1P09601 288 aa13.61□□□□□ -0.23
TRAFD1-208ENST00000552890 SLC27A3Q5K4L6 730 aa13.61□□□□□ -0.23
TRAFD1-208ENST00000552890 FAM182BQ5T319 152 aa13.61□□□□□ -0.23
TRAFD1-208ENST00000552890 RTF1Q92541 710 aaKnown RBP13.61□□□□□ -0.23
TRAFD1-208ENST00000552890 SYTL4Q96C24 671 aaPredicted RBP13.61□□□□□ -0.23
TRAFD1-208ENST00000552890 TMOD3Q9NYL9 352 aa13.61□□□□□ -0.23
TRAFD1-208ENST00000552890 EP400Q96L91 3159 aa13.6□□□□□ -0.23
TRAFD1-208ENST00000552890 GNAT3A8MTJ3 354 aa13.59□□□□□ -0.23
TRAFD1-208ENST00000552890 PRIM1P49642 420 aaKnown RBP13.59□□□□□ -0.23
TRAFD1-208ENST00000552890 LMOD3Q0VAK6 560 aa13.59□□□□□ -0.23
TRAFD1-208ENST00000552890 AEBP1Q8IUX7 1158 aa13.59□□□□□ -0.23
TRAFD1-208ENST00000552890 PRKAR2BP31323 418 aa13.58□□□□□ -0.24
TRAFD1-208ENST00000552890 CABP4P57796 275 aa13.58□□□□□ -0.24
TRAFD1-208ENST00000552890 RSPH6AQ9H0K4 717 aa13.58□□□□□ -0.24
TRAFD1-208ENST00000552890 RGPD3A6NKT7 1758 aaPredicted RBP13.58□□□□□ -0.24
TRAFD1-208ENST00000552890 RGPD4Q7Z3J3 1758 aa13.58□□□□□ -0.24
TRAFD1-208ENST00000552890 NHSQ6T4R5 1651 aa13.57□□□□□ -0.24
TRAFD1-208ENST00000552890 ACSBG1Q96GR2 724 aa13.57□□□□□ -0.24
TRAFD1-208ENST00000552890 CAMKK2Q96RR4 588 aa13.57□□□□□ -0.24
TRAFD1-208ENST00000552890 SBF2Q86WG5 1849 aa13.57□□□□□ -0.24
TRAFD1-208ENST00000552890 EN1Q05925 392 aaPredicted RBP13.56□□□□□ -0.24
TRAFD1-208ENST00000552890 TEFQ10587 303 aa13.56□□□□□ -0.24
TRAFD1-208ENST00000552890 MPRIPQ6WCQ1 1025 aa13.56□□□□□ -0.24
TRAFD1-208ENST00000552890 MAP3K5Q99683 1374 aa13.55□□□□□ -0.24
TRAFD1-208ENST00000552890 KCNQ2O43526 872 aa13.54□□□□□ -0.24
TRAFD1-208ENST00000552890 MTHFSDQ2M296 383 aaKnown RBP13.54□□□□□ -0.24
TRAFD1-208ENST00000552890 DEFB132Q7Z7B7 95 aa13.54□□□□□ -0.24
TRAFD1-208ENST00000552890 NGEFQ8N5V2 710 aa13.54□□□□□ -0.24
TRAFD1-208ENST00000552890 TNS1Q9HBL0 1735 aaKnown RBP13.53□□□□□ -0.24
TRAFD1-208ENST00000552890 CALD1Q05682 793 aaKnown RBP13.53□□□□□ -0.24
TRAFD1-208ENST00000552890 TXNRD1Q16881 649 aa13.53□□□□□ -0.24
TRAFD1-208ENST00000552890 PNISRQ8TF01 805 aaKnown RBP13.53□□□□□ -0.24
TRAFD1-208ENST00000552890 RUNDC1Q96C34 613 aa13.53□□□□□ -0.24
TRAFD1-208ENST00000552890 RNMTO43148 476 aaKnown RBP13.52□□□□□ -0.25
TRAFD1-208ENST00000552890 EZH2Q15910 746 aaKnown RBP13.52□□□□□ -0.25
TRAFD1-208ENST00000552890 NFE2L2Q16236 605 aa13.52□□□□□ -0.25
TRAFD1-208ENST00000552890 FLAD1Q8NFF5 587 aa13.52□□□□□ -0.25
TRAFD1-208ENST00000552890 PIGBQ92521 554 aa13.52□□□□□ -0.25
TRAFD1-208ENST00000552890 SLC52A2Q9HAB3 445 aa13.52□□□□□ -0.25
TRAFD1-208ENST00000552890 MRS2Q9HD23 443 aa13.52□□□□□ -0.25
TRAFD1-208ENST00000552890 STK32BQ9NY57 414 aa13.52□□□□□ -0.25
TRAFD1-208ENST00000552890 SHANK3Q9BYB0 1731 aa13.52□□□□□ -0.25
TRAFD1-208ENST00000552890 NCBP3Q53F19 620 aaKnown RBP13.51□□□□□ -0.25
TRAFD1-208ENST00000552890 TTC5Q8N0Z6 440 aa13.51□□□□□ -0.25
TRAFD1-208ENST00000552890 CCNL1Q9UK58 526 aaPredicted RBP13.51□□□□□ -0.25
TRAFD1-208ENST00000552890 PALLDQ8WX93 1383 aa13.5□□□□□ -0.25
TRAFD1-208ENST00000552890 NFATC2IPQ8NCF5 419 aa13.5□□□□□ -0.25
TRAFD1-208ENST00000552890 PLEKHF1Q96S99 279 aa13.5□□□□□ -0.25
TRAFD1-208ENST00000552890 TEX13AQ9BXU3 409 aaPredicted RBP13.5□□□□□ -0.25
TRAFD1-208ENST00000552890 CHMP4AQ9BY43 222 aa13.5□□□□□ -0.25
TRAFD1-208ENST00000552890 BABAM1Q9NWV8 329 aa13.5□□□□□ -0.25
TRAFD1-208ENST00000552890 DOT1LQ8TEK3 1739 aa13.5□□□□□ -0.25
TRAFD1-208ENST00000552890 BTAF1O14981 1849 aa13.49□□□□□ -0.25
TRAFD1-208ENST00000552890 CCER2I3L3R5 266 aa13.49□□□□□ -0.25
TRAFD1-208ENST00000552890 VSIG10Q8N0Z9 540 aa13.49□□□□□ -0.25
TRAFD1-208ENST00000552890 PHACTR3Q96KR7 559 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms