RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 NME9Q86XW9 330 aa12.23□□□□□ -0.45
CDK4-213ENST00000552713 L3MBTL2Q969R5 705 aa12.23□□□□□ -0.45
CDK4-213ENST00000552713 USP31Q70CQ4 1352 aa12.22□□□□□ -0.45
CDK4-213ENST00000552713 YBX3P16989 372 aaKnown RBP eCLIP12.22□□□□□ -0.45
CDK4-213ENST00000552713 ANKRD24Q8TF21 1146 aa12.22□□□□□ -0.45
CDK4-213ENST00000552713 SBNO2Q9Y2G9 1366 aa12.2□□□□□ -0.46
CDK4-213ENST00000552713 SLC16A10Q8TF71 515 aa12.2□□□□□ -0.46
CDK4-213ENST00000552713 FAM208AQ9UK61 1670 aaKnown RBP12.19□□□□□ -0.46
CDK4-213ENST00000552713 TAF1LQ8IZX4 1826 aa12.19□□□□□ -0.46
CDK4-213ENST00000552713 POLD1P28340 1107 aa12.19□□□□□ -0.46
CDK4-213ENST00000552713 DDX54Q8TDD1 881 aaKnown RBP12.19□□□□□ -0.46
CDK4-213ENST00000552713 TFCP2L1Q9NZI6 479 aa12.19□□□□□ -0.46
CDK4-213ENST00000552713 NSD2O96028 1365 aa12.18□□□□□ -0.46
CDK4-213ENST00000552713 SLC27A3Q5K4L6 730 aa12.18□□□□□ -0.46
CDK4-213ENST00000552713 ROCK2O75116 1388 aaKnown RBP12.18□□□□□ -0.46
CDK4-213ENST00000552713 GOLGB1Q14789 3259 aaKnown RBP12.17□□□□□ -0.46
CDK4-213ENST00000552713 PRIM1P49642 420 aaKnown RBP12.17□□□□□ -0.46
CDK4-213ENST00000552713 LTV1Q96GA3 475 aaPredicted RBP12.17□□□□□ -0.46
CDK4-213ENST00000552713 SIN3AQ96ST3 1273 aa12.17□□□□□ -0.46
CDK4-213ENST00000552713 C5P01031 1676 aa12.16□□□□□ -0.46
CDK4-213ENST00000552713 COL23A1Q86Y22 540 aaPredicted RBP12.16□□□□□ -0.46
CDK4-213ENST00000552713 SYTL4Q96C24 671 aaPredicted RBP12.16□□□□□ -0.46
CDK4-213ENST00000552713 SLC12A5Q9H2X9 1139 aa12.16□□□□□ -0.46
CDK4-213ENST00000552713 ATP10DQ9P241 1426 aa12.15□□□□□ -0.46
CDK4-213ENST00000552713 FBLN1P23142 703 aa12.15□□□□□ -0.46
CDK4-213ENST00000552713 MSL1Q68DK7 614 aa12.15□□□□□ -0.46
CDK4-213ENST00000552713 ANKRD36BQ8N2N9 1353 aa12.15□□□□□ -0.46
CDK4-213ENST00000552713 ITGB4P16144 1822 aa12.14□□□□□ -0.47
CDK4-213ENST00000552713 TMC1Q8TDI8 760 aa12.14□□□□□ -0.47
CDK4-213ENST00000552713 IP6K1Q92551 441 aa12.14□□□□□ -0.47
CDK4-213ENST00000552713 MEGF6O75095 1541 aa12.14□□□□□ -0.47
CDK4-213ENST00000552713 EDC4Q6P2E9 1401 aaKnown RBP12.13□□□□□ -0.47
CDK4-213ENST00000552713 CCNL1Q9UK58 526 aaPredicted RBP12.13□□□□□ -0.47
CDK4-213ENST00000552713 A0A1W2PP64 1363 aa12.13□□□□□ -0.47
CDK4-213ENST00000552713 CEP350Q5VT06 3117 aa12.13□□□□□ -0.47
CDK4-213ENST00000552713 TOGARAM1Q9Y4F4 1720 aa12.12□□□□□ -0.47
CDK4-213ENST00000552713 GRIN3BO60391 1043 aa12.12□□□□□ -0.47
CDK4-213ENST00000552713 UBR3Q6ZT12 1888 aa12.12□□□□□ -0.47
CDK4-213ENST00000552713 NEUROD1Q13562 356 aa12.11□□□□□ -0.47
CDK4-213ENST00000552713 MAP3K19Q56UN5 1328 aa12.11□□□□□ -0.47
CDK4-213ENST00000552713 ADCY9O60503 1353 aa12.1□□□□□ -0.47
CDK4-213ENST00000552713 HOXC9P31274 260 aa12.1□□□□□ -0.47
CDK4-213ENST00000552713 HDGFL2Q7Z4V5 671 aaPredicted RBP12.1□□□□□ -0.47
CDK4-213ENST00000552713 ZCRB1Q8TBF4 217 aaKnown RBP12.1□□□□□ -0.47
CDK4-213ENST00000552713 ZNF526Q8TF50 670 aaPredicted RBP12.1□□□□□ -0.47
CDK4-213ENST00000552713 SMIM5Q71RC9 77 aa12.09□□□□□ -0.47
CDK4-213ENST00000552713 AMIGO3Q86WK7 504 aa12.09□□□□□ -0.47
CDK4-213ENST00000552713 WWC3Q9ULE0 1092 aa12.09□□□□□ -0.47
CDK4-213ENST00000552713 C4BP0C0L5 1744 aa12.08□□□□□ -0.47
CDK4-213ENST00000552713 USP47Q96K76 1375 aa12.08□□□□□ -0.48
CDK4-213ENST00000552713 HSPA6P17066 643 aa12.08□□□□□ -0.48
CDK4-213ENST00000552713 USHBP1Q8N6Y0 703 aa12.08□□□□□ -0.48
CDK4-213ENST00000552713 GPBP1L1Q9HC44 474 aaPredicted RBP12.08□□□□□ -0.48
CDK4-213ENST00000552713 MAP2P11137 1827 aaKnown RBP12.07□□□□□ -0.48
CDK4-213ENST00000552713 NBPF6Q5VWK0 638 aa12.07□□□□□ -0.48
CDK4-213ENST00000552713 NBPF4Q96M43 638 aa12.07□□□□□ -0.48
CDK4-213ENST00000552713 CD2APQ9Y5K6 639 aa12.07□□□□□ -0.48
CDK4-213ENST00000552713 AMPHP49418 695 aa12.06□□□□□ -0.48
CDK4-213ENST00000552713 CARD11Q9BXL7 1154 aa12.06□□□□□ -0.48
CDK4-213ENST00000552713 TERF2IPQ9NYB0 399 aa12.06□□□□□ -0.48
CDK4-213ENST00000552713 N4BP2Q86UW6 1770 aaPredicted RBP12.05□□□□□ -0.48
CDK4-213ENST00000552713 RRS1Q15050 365 aaKnown RBP12.05□□□□□ -0.48
CDK4-213ENST00000552713 KIAA1551Q9HCM1 1747 aa12.05□□□□□ -0.48
CDK4-213ENST00000552713 COG3Q96JB2 828 aa12.04□□□□□ -0.48
CDK4-213ENST00000552713 IGSF1Q8N6C5 1336 aa12.04□□□□□ -0.48
CDK4-213ENST00000552713 KIF13BQ9NQT8 1826 aa12.04□□□□□ -0.48
CDK4-213ENST00000552713 PALLDQ8WX93 1383 aa12.04□□□□□ -0.48
CDK4-213ENST00000552713 KIF3CO14782 793 aa12.03□□□□□ -0.48
CDK4-213ENST00000552713 MPRIPQ6WCQ1 1025 aa12.03□□□□□ -0.48
CDK4-213ENST00000552713 PKD1L3Q7Z443 1732 aa12.03□□□□□ -0.48
CDK4-213ENST00000552713 KIF20BQ96Q89 1820 aa12.02□□□□□ -0.48
CDK4-213ENST00000552713 CICQ96RK0 1608 aaPredicted RBP12.01□□□□□ -0.49
CDK4-213ENST00000552713 CYP27B1O15528 508 aa12.01□□□□□ -0.49
CDK4-213ENST00000552713 ABCB7O75027 752 aa12.01□□□□□ -0.49
CDK4-213ENST00000552713 PHF14O94880 888 aa12.01□□□□□ -0.49
CDK4-213ENST00000552713 PUS7Q96PZ0 661 aaKnown RBP12.01□□□□□ -0.49
CDK4-213ENST00000552713 TESK2Q96S53 571 aa12.01□□□□□ -0.49
CDK4-213ENST00000552713 BRCA1P38398 1863 aaKnown RBP12.01□□□□□ -0.49
CDK4-213ENST00000552713 RTL1A6NKG5 1358 aa12.01□□□□□ -0.49
CDK4-213ENST00000552713 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12□□□□□ -0.49
CDK4-213ENST00000552713 TATP17735 454 aaPredicted RBP12□□□□□ -0.49
CDK4-213ENST00000552713 HSP90AB2PQ58FF8 381 aa12□□□□□ -0.49
CDK4-213ENST00000552713 FLAD1Q8NFF5 587 aa12□□□□□ -0.49
CDK4-213ENST00000552713 RAPGEF4Q8WZA2 1011 aa12□□□□□ -0.49
CDK4-213ENST00000552713 GGNBP2Q9H3C7 697 aa12□□□□□ -0.49
CDK4-213ENST00000552713 CGNL1Q0VF96 1302 aa12□□□□□ -0.49
CDK4-213ENST00000552713 FYB1O15117 783 aa11.99□□□□□ -0.49
CDK4-213ENST00000552713 LINC00116Q8NCU8 138 aa11.99□□□□□ -0.49
CDK4-213ENST00000552713 PIGBQ92521 554 aa11.99□□□□□ -0.49
CDK4-213ENST00000552713 AK7Q96M32 723 aa11.99□□□□□ -0.49
CDK4-213ENST00000552713 PCDH11XQ9BZA7 1347 aa11.99□□□□□ -0.49
CDK4-213ENST00000552713 PCDH11YQ9BZA8 1340 aa11.99□□□□□ -0.49
CDK4-213ENST00000552713 WDR90Q96KV7 1748 aa11.97□□□□□ -0.49
CDK4-213ENST00000552713 ST20-MTHFSA0A0A6YYL1 179 aa11.97□□□□□ -0.49
CDK4-213ENST00000552713 DNAJC5GQ8N7S2 189 aa11.97□□□□□ -0.49
CDK4-213ENST00000552713 MYH14Q7Z406 1995 aaKnown RBP11.97□□□□□ -0.49
CDK4-213ENST00000552713 PXDNLA1KZ92 1463 aa11.96□□□□□ -0.49
CDK4-213ENST00000552713 SMG6Q86US8 1419 aaKnown RBP11.96□□□□□ -0.49
CDK4-213ENST00000552713 INSRP06213 1382 aa11.96□□□□□ -0.49
CDK4-213ENST00000552713 ITPK1Q13572 414 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms