RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 ANKRD44Q8N8A2 993 aa16.18■□□□□ 0.18
CACNB3-219ENST00000551544 FOXO3O43524 673 aa16.18■□□□□ 0.18
CACNB3-219ENST00000551544 XRCC6P12956 609 aaKnown RBP eCLIP16.18■□□□□ 0.18
CACNB3-219ENST00000551544 OTUD7AQ8TE49 926 aaPredicted RBP16.18■□□□□ 0.18
CACNB3-219ENST00000551544 PLEKHG3A1L390 1219 aa16.17■□□□□ 0.18
CACNB3-219ENST00000551544 K7ELQ4 463 aaPredicted RBP16.17■□□□□ 0.18
CACNB3-219ENST00000551544 SLC4A2P04920 1241 aa16.17■□□□□ 0.18
CACNB3-219ENST00000551544 MEIS3Q99687 375 aa16.17■□□□□ 0.18
CACNB3-219ENST00000551544 ADAMTS13Q76LX8 1427 aa16.17■□□□□ 0.18
CACNB3-219ENST00000551544 MSH6P52701 1360 aa16.17■□□□□ 0.18
CACNB3-219ENST00000551544 SMARCA5O60264 1052 aaPredicted RBP16.17■□□□□ 0.18
CACNB3-219ENST00000551544 CEP85Q6P2H3 762 aa16.17■□□□□ 0.18
CACNB3-219ENST00000551544 OVOS2A0A0J9YW53 1432 aa16.16■□□□□ 0.18
CACNB3-219ENST00000551544 OVOS2Q6IE36 1432 aa16.16■□□□□ 0.18
CACNB3-219ENST00000551544 TTC22Q5TAA0 569 aa16.16■□□□□ 0.18
CACNB3-219ENST00000551544 RGS12O14924 1447 aa16.16■□□□□ 0.18
CACNB3-219ENST00000551544 USP6P35125 1406 aa16.16■□□□□ 0.18
CACNB3-219ENST00000551544 FSD2A1L4K1 749 aa16.16■□□□□ 0.18
CACNB3-219ENST00000551544 PLPPR3Q6T4P5 718 aa16.16■□□□□ 0.18
CACNB3-219ENST00000551544 RPAP2Q8IXW5 612 aaPredicted RBP16.16■□□□□ 0.18
CACNB3-219ENST00000551544 CIZ1Q9ULV3 898 aaPredicted RBP16.16■□□□□ 0.18
CACNB3-219ENST00000551544 NRKQ7Z2Y5 1582 aa16.15■□□□□ 0.18
CACNB3-219ENST00000551544 ATP10DQ9P241 1426 aa16.15■□□□□ 0.18
CACNB3-219ENST00000551544 SLC4A10Q6U841 1118 aa16.15■□□□□ 0.18
CACNB3-219ENST00000551544 KIAA0232Q92628 1395 aa16.15■□□□□ 0.18
CACNB3-219ENST00000551544 RTF1Q92541 710 aaKnown RBP16.14■□□□□ 0.17
CACNB3-219ENST00000551544 PANK2Q9BZ23 570 aa16.14■□□□□ 0.17
CACNB3-219ENST00000551544 PTPRCP08575 1304 aa16.14■□□□□ 0.17
CACNB3-219ENST00000551544 MAP3K19Q56UN5 1328 aa16.14■□□□□ 0.17
CACNB3-219ENST00000551544 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.14■□□□□ 0.17
CACNB3-219ENST00000551544 RAB3GAP1Q15042 981 aa16.14■□□□□ 0.17
CACNB3-219ENST00000551544 MTHFSDQ2M296 383 aaKnown RBP16.14■□□□□ 0.17
CACNB3-219ENST00000551544 GBP4Q96PP9 640 aa16.14■□□□□ 0.17
CACNB3-219ENST00000551544 TSPYL4Q9UJ04 414 aa16.14■□□□□ 0.17
CACNB3-219ENST00000551544 RTL1A6NKG5 1358 aa16.14■□□□□ 0.17
CACNB3-219ENST00000551544 CEBPAP49715 358 aaPredicted RBP16.14■□□□□ 0.17
CACNB3-219ENST00000551544 GAS2L2Q8NHY3 880 aa16.14■□□□□ 0.17
CACNB3-219ENST00000551544 F6X3S4 739 aa16.13■□□□□ 0.17
CACNB3-219ENST00000551544 G2E3Q7L622 706 aa16.13■□□□□ 0.17
CACNB3-219ENST00000551544 NGDNQ8NEJ9 315 aaKnown RBP16.12■□□□□ 0.17
CACNB3-219ENST00000551544 CRB1P82279 1406 aa16.12■□□□□ 0.17
CACNB3-219ENST00000551544 PEAK1Q9H792 1746 aa16.12■□□□□ 0.17
CACNB3-219ENST00000551544 PLEKHG5O94827 1062 aa16.12■□□□□ 0.17
CACNB3-219ENST00000551544 UBR1Q8IWV7 1749 aa16.12■□□□□ 0.17
CACNB3-219ENST00000551544 SDSP20132 328 aa16.11■□□□□ 0.17
CACNB3-219ENST00000551544 AMPHP49418 695 aa16.11■□□□□ 0.17
CACNB3-219ENST00000551544 RRAGDQ9NQL2 400 aaPredicted RBP16.11■□□□□ 0.17
CACNB3-219ENST00000551544 AMOTL2Q9Y2J4 779 aa16.11■□□□□ 0.17
CACNB3-219ENST00000551544 USP31Q70CQ4 1352 aa16.11■□□□□ 0.17
CACNB3-219ENST00000551544 PLEKHG1Q9ULL1 1385 aa16.11■□□□□ 0.17
CACNB3-219ENST00000551544 PTPRUQ92729 1446 aa16.1■□□□□ 0.17
CACNB3-219ENST00000551544 SSFA2P28290 1259 aa16.1■□□□□ 0.17
CACNB3-219ENST00000551544 USP26Q9BXU7 913 aa16.1■□□□□ 0.17
CACNB3-219ENST00000551544 EID1Q9Y6B2 187 aa16.1■□□□□ 0.17
CACNB3-219ENST00000551544 RABEP1Q15276 862 aa16.09■□□□□ 0.17
CACNB3-219ENST00000551544 CASC1Q6TDU7 716 aa16.09■□□□□ 0.17
CACNB3-219ENST00000551544 PKNOX2Q96KN3 472 aa16.09■□□□□ 0.17
CACNB3-219ENST00000551544 ARHGEF10O15013 1369 aa16.09■□□□□ 0.17
CACNB3-219ENST00000551544 MRE11P49959 708 aa16.09■□□□□ 0.17
CACNB3-219ENST00000551544 EYA1Q99502 592 aa16.09■□□□□ 0.17
CACNB3-219ENST00000551544 HMMRO75330 724 aa16.08■□□□□ 0.16
CACNB3-219ENST00000551544 TTC21AQ8NDW8 1320 aa16.08■□□□□ 0.16
CACNB3-219ENST00000551544 NECTIN2Q92692 538 aa16.08■□□□□ 0.16
CACNB3-219ENST00000551544 FLT4P35916 1363 aa16.07■□□□□ 0.16
CACNB3-219ENST00000551544 TOPAZ1Q8N9V7 1692 aa16.07■□□□□ 0.16
CACNB3-219ENST00000551544 NUTM2GQ5VZR2 741 aa16.07■□□□□ 0.16
CACNB3-219ENST00000551544 GRPEL1Q9HAV7 217 aa16.07■□□□□ 0.16
CACNB3-219ENST00000551544 SSH2Q76I76 1423 aa16.07■□□□□ 0.16
CACNB3-219ENST00000551544 SBNO1A3KN83 1393 aa16.07■□□□□ 0.16
CACNB3-219ENST00000551544 CCT4P50991 539 aaKnown RBP16.06■□□□□ 0.16
CACNB3-219ENST00000551544 STK31Q9BXU1 1019 aa16.06■□□□□ 0.16
CACNB3-219ENST00000551544 RGPD1P0DJD0 1748 aa16.06■□□□□ 0.16
CACNB3-219ENST00000551544 RIMS1Q86UR5 1692 aaKnown RBP16.06■□□□□ 0.16
CACNB3-219ENST00000551544 NLRP6P59044 892 aa16.05■□□□□ 0.16
CACNB3-219ENST00000551544 EXOC6BQ9Y2D4 811 aa16.05■□□□□ 0.16
CACNB3-219ENST00000551544 SKOR2Q2VWA4 1001 aaPredicted RBP16.05■□□□□ 0.16
CACNB3-219ENST00000551544 NALCNQ8IZF0 1738 aa16.05■□□□□ 0.16
CACNB3-219ENST00000551544 GNAI2P04899 355 aa16.04■□□□□ 0.16
CACNB3-219ENST00000551544 FKBP5Q13451 457 aaPredicted RBP16.04■□□□□ 0.16
CACNB3-219ENST00000551544 TSHZ3Q63HK5 1081 aa16.04■□□□□ 0.16
CACNB3-219ENST00000551544 IGSF1Q8N6C5 1336 aa16.04■□□□□ 0.16
CACNB3-219ENST00000551544 GOLGA6L22H0YM25 854 aa16.04■□□□□ 0.16
CACNB3-219ENST00000551544 GAS2L3Q86XJ1 694 aa16.04■□□□□ 0.16
CACNB3-219ENST00000551544 LTV1Q96GA3 475 aaPredicted RBP16.04■□□□□ 0.16
CACNB3-219ENST00000551544 CEP170BQ9Y4F5 1589 aaPredicted RBP16.03■□□□□ 0.16
CACNB3-219ENST00000551544 REC8O95072 547 aa16.03■□□□□ 0.16
CACNB3-219ENST00000551544 PDE1AP54750 535 aa16.03■□□□□ 0.16
CACNB3-219ENST00000551544 KDRP35968 1356 aa16.03■□□□□ 0.16
CACNB3-219ENST00000551544 PTMSP20962 102 aa16.03■□□□□ 0.16
CACNB3-219ENST00000551544 BAG4O95429 457 aaKnown RBP16.02■□□□□ 0.16
CACNB3-219ENST00000551544 CLCN1P35523 988 aa16.02■□□□□ 0.16
CACNB3-219ENST00000551544 FLIIQ13045 1269 aa16.02■□□□□ 0.16
CACNB3-219ENST00000551544 KIF13AQ9H1H9 1805 aa16.02■□□□□ 0.16
CACNB3-219ENST00000551544 ERC2O15083 957 aa16.02■□□□□ 0.15
CACNB3-219ENST00000551544 GNAT3A8MTJ3 354 aa16.01■□□□□ 0.15
CACNB3-219ENST00000551544 ST18O60284 1047 aa16.01■□□□□ 0.15
CACNB3-219ENST00000551544 TBX22Q9Y458 520 aa16.01■□□□□ 0.15
CACNB3-219ENST00000551544 CCDC30Q5VVM6 783 aa16.01■□□□□ 0.15
CACNB3-219ENST00000551544 ISY1Q9ULR0 285 aaKnown RBP16■□□□□ 0.15
CACNB3-219ENST00000551544 DDX49Q9Y6V7 483 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms