RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 PLCB2Q00722 1185 aa14.87□□□□□ -0.03
ERBB3-219ENST00000551242 ZNF428Q96B54 188 aa14.87□□□□□ -0.03
ERBB3-219ENST00000551242 ZC3H13Q5T200 1668 aaKnown RBP14.87□□□□□ -0.03
ERBB3-219ENST00000551242 SYAP1Q96A49 352 aaPredicted RBP14.87□□□□□ -0.03
ERBB3-219ENST00000551242 CFAP44Q96MT7 982 aa14.87□□□□□ -0.03
ERBB3-219ENST00000551242 MBIPQ9NS73 344 aa14.87□□□□□ -0.03
ERBB3-219ENST00000551242 ZFYVE16Q7Z3T8 1539 aa14.86□□□□□ -0.03
ERBB3-219ENST00000551242 HCLS1P14317 486 aaPredicted RBP14.86□□□□□ -0.03
ERBB3-219ENST00000551242 U2AF2P26368 475 aaKnown RBP eCLIP14.86□□□□□ -0.034e-13■□□□□ 11.2
ERBB3-219ENST00000551242 SRPK2P78362 688 aaKnown RBP14.86□□□□□ -0.03
ERBB3-219ENST00000551242 TWISTNBQ3B726 338 aaPredicted RBP14.86□□□□□ -0.03
ERBB3-219ENST00000551242 GGT6Q6P531 493 aa14.86□□□□□ -0.03
ERBB3-219ENST00000551242 PDCL2Q8N4E4 241 aa14.86□□□□□ -0.03
ERBB3-219ENST00000551242 C8orf58Q8NAV2 365 aa14.86□□□□□ -0.03
ERBB3-219ENST00000551242 DEPDC5O75140 1603 aa14.86□□□□□ -0.03
ERBB3-219ENST00000551242 ERC2O15083 957 aa14.85□□□□□ -0.03
ERBB3-219ENST00000551242 FKBP5Q13451 457 aaPredicted RBP14.85□□□□□ -0.03
ERBB3-219ENST00000551242 USP48Q86UV5 1035 aa14.85□□□□□ -0.03
ERBB3-219ENST00000551242 IFT172Q9UG01 1749 aa14.85□□□□□ -0.03
ERBB3-219ENST00000551242 TULP4Q9NRJ4 1543 aa14.85□□□□□ -0.03
ERBB3-219ENST00000551242 RAPGEF3O95398 923 aa14.85□□□□□ -0.03
ERBB3-219ENST00000551242 REREQ9P2R6 1566 aa14.85□□□□□ -0.03
ERBB3-219ENST00000551242 KNDC1Q76NI1 1749 aa14.85□□□□□ -0.03
ERBB3-219ENST00000551242 KIF20AO95235 890 aa14.85□□□□□ -0.03
ERBB3-219ENST00000551242 ADGRB1O14514 1584 aa14.84□□□□□ -0.03
ERBB3-219ENST00000551242 FCHSD2O94868 740 aa14.84□□□□□ -0.03
ERBB3-219ENST00000551242 SETBP1Q9Y6X0 1596 aa14.84□□□□□ -0.03
ERBB3-219ENST00000551242 NEURL4Q96JN8 1562 aa14.84□□□□□ -0.03
ERBB3-219ENST00000551242 SPTLC3Q9NUV7 552 aa14.84□□□□□ -0.03
ERBB3-219ENST00000551242 PALD1Q9ULE6 856 aa14.84□□□□□ -0.03
ERBB3-219ENST00000551242 RIOK3O14730 519 aaKnown RBP14.83□□□□□ -0.04
ERBB3-219ENST00000551242 PHF14O94880 888 aa14.83□□□□□ -0.04
ERBB3-219ENST00000551242 TSHZ3Q63HK5 1081 aa14.83□□□□□ -0.04
ERBB3-219ENST00000551242 API5Q9BZZ5 524 aaKnown RBP14.83□□□□□ -0.04
ERBB3-219ENST00000551242 CFAP65Q6ZU64 1925 aaKnown RBP14.83□□□□□ -0.04
ERBB3-219ENST00000551242 VWDEQ8N2E2 1590 aa14.83□□□□□ -0.04
ERBB3-219ENST00000551242 LETM1O95202 739 aaPredicted RBP14.83□□□□□ -0.04
ERBB3-219ENST00000551242 KRT24Q2M2I5 525 aa14.83□□□□□ -0.04
ERBB3-219ENST00000551242 STK26Q9P289 416 aa14.83□□□□□ -0.04
ERBB3-219ENST00000551242 ANKRD44Q8N8A2 993 aa14.82□□□□□ -0.04
ERBB3-219ENST00000551242 NFE2L2Q16236 605 aa14.82□□□□□ -0.04
ERBB3-219ENST00000551242 FAM184AQ8NB25 1140 aa14.82□□□□□ -0.04
ERBB3-219ENST00000551242 BBXQ8WY36 941 aaPredicted RBP14.82□□□□□ -0.04
ERBB3-219ENST00000551242 UPF3BQ9BZI7 483 aaKnown RBP14.82□□□□□ -0.04
ERBB3-219ENST00000551242 PYCARDQ9ULZ3 195 aa14.82□□□□□ -0.04
ERBB3-219ENST00000551242 LRRC7Q96NW7 1537 aa14.82□□□□□ -0.04
ERBB3-219ENST00000551242 TCHHQ07283 1943 aa14.81□□□□□ -0.04
ERBB3-219ENST00000551242 GNAI1P63096 354 aa14.81□□□□□ -0.04
ERBB3-219ENST00000551242 UVSSAQ2YD98 709 aa14.81□□□□□ -0.04
ERBB3-219ENST00000551242 CEP85Q6P2H3 762 aa14.81□□□□□ -0.04
ERBB3-219ENST00000551242 CUL4AQ13619 759 aa14.81□□□□□ -0.04
ERBB3-219ENST00000551242 ATP10DQ9P241 1426 aa14.8□□□□□ -0.04
ERBB3-219ENST00000551242 FAM83GA6ND36 823 aa14.8□□□□□ -0.04
ERBB3-219ENST00000551242 SPC24Q8NBT2 197 aa14.8□□□□□ -0.04
ERBB3-219ENST00000551242 IFT57Q9NWB7 429 aa14.8□□□□□ -0.04
ERBB3-219ENST00000551242 AP5Z1O43299 807 aa14.79□□□□□ -0.04
ERBB3-219ENST00000551242 KCNF1Q9H3M0 494 aa14.79□□□□□ -0.04
ERBB3-219ENST00000551242 CNPY2Q9Y2B0 182 aa14.79□□□□□ -0.04
ERBB3-219ENST00000551242 KDM4AO75164 1064 aa14.79□□□□□ -0.04
ERBB3-219ENST00000551242 DCTN1Q14203 1278 aa14.79□□□□□ -0.04
ERBB3-219ENST00000551242 KIAA1524Q8TCG1 905 aa14.79□□□□□ -0.04
ERBB3-219ENST00000551242 CCDC183Q5T5S1 534 aa14.79□□□□□ -0.04
ERBB3-219ENST00000551242 PUS7Q96PZ0 661 aaKnown RBP14.79□□□□□ -0.04
ERBB3-219ENST00000551242 FAM135BQ49AJ0 1406 aa14.78□□□□□ -0.04
ERBB3-219ENST00000551242 ATP7AQ04656 1500 aa14.78□□□□□ -0.04
ERBB3-219ENST00000551242 ZNF853P0CG23 659 aa14.78□□□□□ -0.04
ERBB3-219ENST00000551242 MEIS3Q99687 375 aa14.78□□□□□ -0.04
ERBB3-219ENST00000551242 PNPLA6Q8IY17 1366 aa14.78□□□□□ -0.04
ERBB3-219ENST00000551242 GTF2E1P29083 439 aaPredicted RBP14.78□□□□□ -0.04
ERBB3-219ENST00000551242 ANKRD7Q92527 254 aa14.78□□□□□ -0.04
ERBB3-219ENST00000551242 SRCIN1Q9C0H9 1055 aa14.78□□□□□ -0.04
ERBB3-219ENST00000551242 ANO2Q9NQ90 1003 aa14.78□□□□□ -0.04
ERBB3-219ENST00000551242 MINK1Q8N4C8 1332 aaPredicted RBP14.78□□□□□ -0.04
ERBB3-219ENST00000551242 ADGRB3O60242 1522 aa14.77□□□□□ -0.04
ERBB3-219ENST00000551242 MROH1Q8NDA8 1641 aa14.77□□□□□ -0.04
ERBB3-219ENST00000551242 MCM2P49736 904 aa14.77□□□□□ -0.04
ERBB3-219ENST00000551242 CHAF1AQ13111 956 aaPredicted RBP14.77□□□□□ -0.04
ERBB3-219ENST00000551242 GIMAP6Q6P9H5 292 aa14.77□□□□□ -0.04
ERBB3-219ENST00000551242 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.77□□□□□ -0.04
ERBB3-219ENST00000551242 RPAP2Q8IXW5 612 aaPredicted RBP14.77□□□□□ -0.04
ERBB3-219ENST00000551242 DTNBO60941 627 aa14.77□□□□□ -0.05
ERBB3-219ENST00000551242 MX1P20591 662 aa14.77□□□□□ -0.05
ERBB3-219ENST00000551242 PDE1AP54750 535 aa14.77□□□□□ -0.05
ERBB3-219ENST00000551242 INTS4Q96HW7 963 aaKnown RBP14.77□□□□□ -0.05
ERBB3-219ENST00000551242 DIAPH3Q9NSV4 1193 aa14.77□□□□□ -0.05
ERBB3-219ENST00000551242 TERF2IPQ9NYB0 399 aa14.77□□□□□ -0.05
ERBB3-219ENST00000551242 EFCAB6Q5THR3 1501 aa14.77□□□□□ -0.05
ERBB3-219ENST00000551242 CGNQ9P2M7 1197 aaKnown RBP14.76□□□□□ -0.05
ERBB3-219ENST00000551242 ABCA9Q8IUA7 1624 aa14.76□□□□□ -0.05
ERBB3-219ENST00000551242 ZNF771Q7L3S4 317 aaPredicted RBP14.76□□□□□ -0.05
ERBB3-219ENST00000551242 ESYT1Q9BSJ8 1104 aa14.76□□□□□ -0.05
ERBB3-219ENST00000551242 POLKQ9UBT6 870 aa14.76□□□□□ -0.05
ERBB3-219ENST00000551242 WDR33Q9C0J8 1336 aaKnown RBP14.75□□□□□ -0.05
ERBB3-219ENST00000551242 BCL11BQ9C0K0 894 aaPredicted RBP14.75□□□□□ -0.05
ERBB3-219ENST00000551242 GLI2P10070 1586 aa14.75□□□□□ -0.05
ERBB3-219ENST00000551242 RTL1A6NKG5 1358 aa14.75□□□□□ -0.05
ERBB3-219ENST00000551242 MSH6P52701 1360 aa14.75□□□□□ -0.05
ERBB3-219ENST00000551242 ZBTB22O15209 634 aa14.75□□□□□ -0.05
ERBB3-219ENST00000551242 LARP6Q9BRS8 491 aaKnown RBP14.75□□□□□ -0.05
ERBB3-219ENST00000551242 FIBPO43427 364 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms