RNA–Protein interactions for RNA: ENST00000551219.5

PTPRR-211, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best)

Gene PTPRR, Length 2,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-211ENST00000551219 TMEM131LA2VDJ0 1609 aa8.28□□□□□ -1.08
PTPRR-211ENST00000551219 VAMP4O75379 141 aa8.28□□□□□ -1.08
PTPRR-211ENST00000551219 ZMYND10O75800 440 aa8.28□□□□□ -1.08
PTPRR-211ENST00000551219 KLHL40Q2TBA0 621 aa8.28□□□□□ -1.08
PTPRR-211ENST00000551219 ANP32BQ92688 251 aaKnown RBP8.28□□□□□ -1.08
PTPRR-211ENST00000551219 TPM2P07951 284 aa8.27□□□□□ -1.09
PTPRR-211ENST00000551219 PRKAR2BP31323 418 aa8.27□□□□□ -1.09
PTPRR-211ENST00000551219 PPP1R9BQ96SB3 815 aa8.27□□□□□ -1.09
PTPRR-211ENST00000551219 CDK12Q9NYV4 1490 aaPredicted RBP8.27□□□□□ -1.09
PTPRR-211ENST00000551219 NUCB2P80303 420 aa8.27□□□□□ -1.09
PTPRR-211ENST00000551219 ZNF853P0CG23 659 aa8.26□□□□□ -1.09
PTPRR-211ENST00000551219 PRAM1Q96QH2 718 aa8.26□□□□□ -1.09
PTPRR-211ENST00000551219 IDI1Q13907 227 aa8.26□□□□□ -1.09
PTPRR-211ENST00000551219 PREX1Q8TCU6 1659 aa8.26□□□□□ -1.09
PTPRR-211ENST00000551219 MINK1Q8N4C8 1332 aaPredicted RBP8.26□□□□□ -1.09
PTPRR-211ENST00000551219 CPSF1Q10570 1443 aaKnown RBP8.26□□□□□ -1.09
PTPRR-211ENST00000551219 SAFB2Q14151 953 aaKnown RBP eCLIP8.25□□□□□ -1.09
PTPRR-211ENST00000551219 CWC22Q9HCG8 908 aaKnown RBP8.25□□□□□ -1.09
PTPRR-211ENST00000551219 STK26Q9P289 416 aa8.25□□□□□ -1.09
PTPRR-211ENST00000551219 ALKQ9UM73 1620 aa8.25□□□□□ -1.09
PTPRR-211ENST00000551219 AATKQ6ZMQ8 1374 aa8.25□□□□□ -1.09
PTPRR-211ENST00000551219 ZNF445P59923 1031 aa8.25□□□□□ -1.09
PTPRR-211ENST00000551219 GAS2L3Q86XJ1 694 aa8.25□□□□□ -1.09
PTPRR-211ENST00000551219 FAM117AQ9C073 453 aa8.25□□□□□ -1.09
PTPRR-211ENST00000551219 DCAF8L1A6NGE4 600 aa8.25□□□□□ -1.09
PTPRR-211ENST00000551219 BAG4O95429 457 aaKnown RBP8.25□□□□□ -1.09
PTPRR-211ENST00000551219 NASPP49321 788 aaPredicted RBP8.25□□□□□ -1.09
PTPRR-211ENST00000551219 HS1BP3Q53T59 392 aa8.25□□□□□ -1.09
PTPRR-211ENST00000551219 INTS3Q68E01 1043 aaKnown RBP8.25□□□□□ -1.09
PTPRR-211ENST00000551219 CASC1Q6TDU7 716 aa8.25□□□□□ -1.09
PTPRR-211ENST00000551219 GAS2L2Q8NHY3 880 aa8.25□□□□□ -1.09
PTPRR-211ENST00000551219 CDK19Q9BWU1 502 aa8.25□□□□□ -1.09
PTPRR-211ENST00000551219 POLKQ9UBT6 870 aa8.25□□□□□ -1.09
PTPRR-211ENST00000551219 EDC4Q6P2E9 1401 aaKnown RBP8.24□□□□□ -1.09
PTPRR-211ENST00000551219 SSFA2P28290 1259 aa8.24□□□□□ -1.09
PTPRR-211ENST00000551219 HSP90AA2PQ14568 343 aaPredicted RBP8.24□□□□□ -1.09
PTPRR-211ENST00000551219 NUTM2DQ5VT03 806 aaPredicted RBP8.24□□□□□ -1.09
PTPRR-211ENST00000551219 SIRT2Q8IXJ6 389 aa8.24□□□□□ -1.09
PTPRR-211ENST00000551219 ERBB4Q15303 1308 aa8.24□□□□□ -1.09
PTPRR-211ENST00000551219 CD2BP2O95400 341 aaKnown RBP8.24□□□□□ -1.09
PTPRR-211ENST00000551219 IRF5Q13568 498 aa8.24□□□□□ -1.09
PTPRR-211ENST00000551219 TWISTNBQ3B726 338 aaPredicted RBP8.24□□□□□ -1.09
PTPRR-211ENST00000551219 TTC22Q5TAA0 569 aa8.24□□□□□ -1.09
PTPRR-211ENST00000551219 DCTPP1Q9H773 170 aa8.24□□□□□ -1.09
PTPRR-211ENST00000551219 DDX49Q9Y6V7 483 aaKnown RBP8.24□□□□□ -1.09
PTPRR-211ENST00000551219 TERF1P54274 439 aa8.23□□□□□ -1.09
PTPRR-211ENST00000551219 ZSCAN30Q86W11 494 aa8.23□□□□□ -1.09
PTPRR-211ENST00000551219 RETREG2Q8NC44 543 aa8.23□□□□□ -1.09
PTPRR-211ENST00000551219 MBIPQ9NS73 344 aa8.23□□□□□ -1.09
PTPRR-211ENST00000551219 RIMS2Q9UQ26 1411 aa8.23□□□□□ -1.09
PTPRR-211ENST00000551219 CFAP65Q6ZU64 1925 aaKnown RBP8.23□□□□□ -1.09
PTPRR-211ENST00000551219 CYP2E1P05181 493 aaPredicted RBP8.23□□□□□ -1.09
PTPRR-211ENST00000551219 IL13P35225 146 aa8.23□□□□□ -1.09
PTPRR-211ENST00000551219 PLEKHM2Q8IWE5 1019 aa8.23□□□□□ -1.09
PTPRR-211ENST00000551219 CABP1Q9NZU7 370 aa8.23□□□□□ -1.09
PTPRR-211ENST00000551219 GSPT1P15170 499 aaKnown RBP8.22□□□□□ -1.09
PTPRR-211ENST00000551219 RPAP2Q8IXW5 612 aaPredicted RBP8.22□□□□□ -1.09
PTPRR-211ENST00000551219 ST18O60284 1047 aa8.22□□□□□ -1.09
PTPRR-211ENST00000551219 ANKRD44Q8N8A2 993 aa8.22□□□□□ -1.09
PTPRR-211ENST00000551219 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.22□□□□□ -1.09
PTPRR-211ENST00000551219 TSPYL6Q8N831 410 aa8.22□□□□□ -1.09
PTPRR-211ENST00000551219 PHACTR3Q96KR7 559 aa8.22□□□□□ -1.09
PTPRR-211ENST00000551219 USP26Q9BXU7 913 aa8.22□□□□□ -1.09
PTPRR-211ENST00000551219 RICTORQ6R327 1708 aa8.21□□□□□ -1.09
PTPRR-211ENST00000551219 MYO5BQ9ULV0 1848 aa8.21□□□□□ -1.09
PTPRR-211ENST00000551219 REC8O95072 547 aa8.21□□□□□ -1.09
PTPRR-211ENST00000551219 ATP10DQ9P241 1426 aa8.21□□□□□ -1.1
PTPRR-211ENST00000551219 NRKQ7Z2Y5 1582 aa8.21□□□□□ -1.1
PTPRR-211ENST00000551219 KNDC1Q76NI1 1749 aa8.21□□□□□ -1.1
PTPRR-211ENST00000551219 MSNP26038 577 aaKnown RBP8.21□□□□□ -1.1
PTPRR-211ENST00000551219 RBM42Q9BTD8 480 aaKnown RBP8.21□□□□□ -1.1
PTPRR-211ENST00000551219 PTPRCP08575 1304 aa8.21□□□□□ -1.1
PTPRR-211ENST00000551219 OFD1O75665 1012 aa8.2□□□□□ -1.1
PTPRR-211ENST00000551219 KIAA0232Q92628 1395 aa8.2□□□□□ -1.1
PTPRR-211ENST00000551219 HMGB1P09429 215 aaKnown RBP8.2□□□□□ -1.1
PTPRR-211ENST00000551219 HMOX1P09601 288 aa8.2□□□□□ -1.1
PTPRR-211ENST00000551219 RIMBP3CA6NJZ7 1639 aa8.19□□□□□ -1.1
PTPRR-211ENST00000551219 RIMBP3BA6NNM3 1639 aa8.19□□□□□ -1.1
PTPRR-211ENST00000551219 RIMBP3Q9UFD9 1639 aa8.19□□□□□ -1.1
PTPRR-211ENST00000551219 ZSCAN23Q3MJ62 389 aa8.19□□□□□ -1.1
PTPRR-211ENST00000551219 MCTP1Q6DN14 999 aa8.19□□□□□ -1.1
PTPRR-211ENST00000551219 C8orf58Q8NAV2 365 aa8.19□□□□□ -1.1
PTPRR-211ENST00000551219 THUMPD2Q9BTF0 503 aaKnown RBP8.19□□□□□ -1.1
PTPRR-211ENST00000551219 LMBRD1Q9NUN5 540 aa8.19□□□□□ -1.1
PTPRR-211ENST00000551219 MCM5P33992 734 aa8.19□□□□□ -1.1
PTPRR-211ENST00000551219 MCM2P49736 904 aa8.19□□□□□ -1.1
PTPRR-211ENST00000551219 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.19□□□□□ -1.1
PTPRR-211ENST00000551219 FAM177A1Q8N128 213 aaPredicted RBP8.19□□□□□ -1.1
PTPRR-211ENST00000551219 RGS12O14924 1447 aa8.19□□□□□ -1.1
PTPRR-211ENST00000551219 BCL11BQ9C0K0 894 aaPredicted RBP8.19□□□□□ -1.1
PTPRR-211ENST00000551219 ERC2O15083 957 aa8.18□□□□□ -1.1
PTPRR-211ENST00000551219 HMMRO75330 724 aa8.18□□□□□ -1.1
PTPRR-211ENST00000551219 MBD3O95983 291 aa8.18□□□□□ -1.1
PTPRR-211ENST00000551219 CEP85Q6P2H3 762 aa8.18□□□□□ -1.1
PTPRR-211ENST00000551219 PDLIM2Q96JY6 352 aa8.18□□□□□ -1.1
PTPRR-211ENST00000551219 SETD1AO15047 1707 aaKnown RBP8.18□□□□□ -1.1
PTPRR-211ENST00000551219 MON2Q7Z3U7 1717 aa8.18□□□□□ -1.1
PTPRR-211ENST00000551219 ZNF500O60304 480 aaPredicted RBP8.18□□□□□ -1.1
PTPRR-211ENST00000551219 RAPGEF3O95398 923 aa8.18□□□□□ -1.1
PTPRR-211ENST00000551219 COG3Q96JB2 828 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms