RNA–Protein interactions for RNA: ENST00000551085.5

ERBB3-217, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 2

Gene ERBB3, Length 4,382 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-217ENST00000551085 C16orf71Q8IYS4 520 aaPredicted RBP13.71□□□□□ -0.21
ERBB3-217ENST00000551085 FAM200AQ8TCP9 573 aa13.71□□□□□ -0.21
ERBB3-217ENST00000551085 KIF2AO00139 706 aaPredicted RBP13.71□□□□□ -0.22
ERBB3-217ENST00000551085 ZBTB22O15209 634 aa13.71□□□□□ -0.22
ERBB3-217ENST00000551085 HMOX1P09601 288 aa13.71□□□□□ -0.22
ERBB3-217ENST00000551085 INTS4Q96HW7 963 aaKnown RBP13.7□□□□□ -0.22
ERBB3-217ENST00000551085 NPM1P06748 294 aaKnown RBP eCLIP13.7□□□□□ -0.22
ERBB3-217ENST00000551085 CLASP1Q7Z460 1538 aa13.7□□□□□ -0.22
ERBB3-217ENST00000551085 LEKR1Q6ZMV7 388 aa13.7□□□□□ -0.22
ERBB3-217ENST00000551085 UBXN4Q92575 508 aa13.7□□□□□ -0.22
ERBB3-217ENST00000551085 TRMT1Q9NXH9 659 aaKnown RBP13.7□□□□□ -0.22
ERBB3-217ENST00000551085 PYCARDQ9ULZ3 195 aa13.7□□□□□ -0.22
ERBB3-217ENST00000551085 WDR7Q9Y4E6 1490 aa13.7□□□□□ -0.22
ERBB3-217ENST00000551085 ZBTB7BO15156 539 aaPredicted RBP13.69□□□□□ -0.22
ERBB3-217ENST00000551085 STX6O43752 255 aa13.69□□□□□ -0.22
ERBB3-217ENST00000551085 KIAA1524Q8TCG1 905 aa13.69□□□□□ -0.22
ERBB3-217ENST00000551085 CKAP2LQ8IYA6 745 aa13.69□□□□□ -0.22
ERBB3-217ENST00000551085 SPAG9O60271 1321 aaKnown RBP13.69□□□□□ -0.22
ERBB3-217ENST00000551085 H3BQV1 296 aa13.69□□□□□ -0.22
ERBB3-217ENST00000551085 ZSCAN22P10073 491 aaPredicted RBP13.69□□□□□ -0.22
ERBB3-217ENST00000551085 IFFO2Q5TF58 517 aa13.69□□□□□ -0.22
ERBB3-217ENST00000551085 STK31Q9BXU1 1019 aa13.69□□□□□ -0.22
ERBB3-217ENST00000551085 ARHGAP45Q92619 1136 aa13.68□□□□□ -0.22
ERBB3-217ENST00000551085 CCDC171Q6TFL3 1326 aa13.68□□□□□ -0.22
ERBB3-217ENST00000551085 ZKSCAN1P17029 563 aaPredicted RBP13.68□□□□□ -0.22
ERBB3-217ENST00000551085 ANKRD36BQ8N2N9 1353 aa13.68□□□□□ -0.22
ERBB3-217ENST00000551085 NUP153P49790 1475 aaKnown RBP13.68□□□□□ -0.22
ERBB3-217ENST00000551085 NEMFO60524 1076 aa13.68□□□□□ -0.22
ERBB3-217ENST00000551085 GSPT1P15170 499 aaKnown RBP13.67□□□□□ -0.22
ERBB3-217ENST00000551085 CREBRFQ8IUR6 639 aa13.67□□□□□ -0.22
ERBB3-217ENST00000551085 TXLNBQ8N3L3 684 aa13.67□□□□□ -0.22
ERBB3-217ENST00000551085 PDCP20941 246 aa13.67□□□□□ -0.22
ERBB3-217ENST00000551085 FBXW7Q969H0 707 aa13.67□□□□□ -0.22
ERBB3-217ENST00000551085 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.67□□□□□ -0.22
ERBB3-217ENST00000551085 THUMPD2Q9BTF0 503 aaKnown RBP13.67□□□□□ -0.22
ERBB3-217ENST00000551085 CABP2Q9NPB3 220 aa13.67□□□□□ -0.22
ERBB3-217ENST00000551085 SPTLC3Q9NUV7 552 aa13.67□□□□□ -0.22
ERBB3-217ENST00000551085 TMEM51Q9NW97 253 aa13.67□□□□□ -0.22
ERBB3-217ENST00000551085 SLU7O95391 586 aaKnown RBP13.67□□□□□ -0.22
ERBB3-217ENST00000551085 TMEM132EQ6IEE7 984 aa13.67□□□□□ -0.22
ERBB3-217ENST00000551085 DCTPP1Q9H773 170 aa13.67□□□□□ -0.22
ERBB3-217ENST00000551085 ITSN2Q9NZM3 1697 aa13.67□□□□□ -0.22
ERBB3-217ENST00000551085 CYP2E1P05181 493 aaPredicted RBP13.66□□□□□ -0.22
ERBB3-217ENST00000551085 GTF2A1P52655 376 aaPredicted RBP13.66□□□□□ -0.22
ERBB3-217ENST00000551085 IRX5P78411 483 aaPredicted RBP13.66□□□□□ -0.22
ERBB3-217ENST00000551085 TERF2Q15554 542 aa13.66□□□□□ -0.22
ERBB3-217ENST00000551085 LARP1BQ659C4 914 aaKnown RBP13.66□□□□□ -0.22
ERBB3-217ENST00000551085 RUFY2Q8WXA3 655 aa13.66□□□□□ -0.22
ERBB3-217ENST00000551085 STAG3Q9UJ98 1225 aa13.66□□□□□ -0.22
ERBB3-217ENST00000551085 RASSF4Q9H2L5 321 aa13.66□□□□□ -0.22
ERBB3-217ENST00000551085 RTEL1-TNFRSF6BF6WH68 1400 aa13.66□□□□□ -0.22
ERBB3-217ENST00000551085 ZNF165P49910 485 aa13.65□□□□□ -0.22
ERBB3-217ENST00000551085 GTF3C6Q969F1 213 aa13.65□□□□□ -0.22
ERBB3-217ENST00000551085 SRCIN1Q9C0H9 1055 aa13.65□□□□□ -0.22
ERBB3-217ENST00000551085 NCBP1Q09161 790 aaKnown RBP13.65□□□□□ -0.22
ERBB3-217ENST00000551085 CCDC73Q6ZRK6 1079 aa13.65□□□□□ -0.22
ERBB3-217ENST00000551085 DEF6Q9H4E7 631 aa13.65□□□□□ -0.22
ERBB3-217ENST00000551085 ANAPC15P60006 121 aa13.65□□□□□ -0.22
ERBB3-217ENST00000551085 FERMT3Q86UX7 667 aa13.65□□□□□ -0.22
ERBB3-217ENST00000551085 ERO1AQ96HE7 468 aa13.65□□□□□ -0.22
ERBB3-217ENST00000551085 SPATA32Q96LK8 384 aa13.65□□□□□ -0.22
ERBB3-217ENST00000551085 LRRCC1Q9C099 1032 aa13.65□□□□□ -0.22
ERBB3-217ENST00000551085 HSP90B1P14625 803 aaKnown RBP13.64□□□□□ -0.23
ERBB3-217ENST00000551085 NAT10Q9H0A0 1025 aaKnown RBP13.64□□□□□ -0.23
ERBB3-217ENST00000551085 DDX41Q9UJV9 622 aaKnown RBP13.64□□□□□ -0.23
ERBB3-217ENST00000551085 FCHSD2O94868 740 aa13.64□□□□□ -0.23
ERBB3-217ENST00000551085 CCDC83Q8IWF9 413 aa13.64□□□□□ -0.23
ERBB3-217ENST00000551085 KDM5DQ9BY66 1539 aa13.64□□□□□ -0.23
ERBB3-217ENST00000551085 SYCP1Q15431 976 aa13.64□□□□□ -0.23
ERBB3-217ENST00000551085 NUTM2DQ5VT03 806 aaPredicted RBP13.64□□□□□ -0.23
ERBB3-217ENST00000551085 LUZP1Q86V48 1076 aa13.64□□□□□ -0.23
ERBB3-217ENST00000551085 PLB1Q6P1J6 1458 aa13.64□□□□□ -0.23
ERBB3-217ENST00000551085 SKILP12757 684 aa13.64□□□□□ -0.23
ERBB3-217ENST00000551085 ELF2Q15723 593 aa13.64□□□□□ -0.23
ERBB3-217ENST00000551085 ANO6Q4KMQ2 910 aa13.64□□□□□ -0.23
ERBB3-217ENST00000551085 LARP6Q9BRS8 491 aaKnown RBP13.64□□□□□ -0.23
ERBB3-217ENST00000551085 LIMCH1Q9UPQ0 1083 aa13.64□□□□□ -0.23
ERBB3-217ENST00000551085 SMC2O95347 1197 aa13.63□□□□□ -0.23
ERBB3-217ENST00000551085 TYRO3Q06418 890 aa13.63□□□□□ -0.23
ERBB3-217ENST00000551085 CCP110O43303 1012 aa13.63□□□□□ -0.23
ERBB3-217ENST00000551085 F13A1P00488 732 aa13.63□□□□□ -0.23
ERBB3-217ENST00000551085 HSP90B2PQ58FF3 399 aa13.63□□□□□ -0.23
ERBB3-217ENST00000551085 MRPL50Q8N5N7 158 aaKnown RBP13.63□□□□□ -0.23
ERBB3-217ENST00000551085 OTUD7AQ8TE49 926 aaPredicted RBP13.63□□□□□ -0.23
ERBB3-217ENST00000551085 ANKRD7Q92527 254 aa13.63□□□□□ -0.23
ERBB3-217ENST00000551085 CTNNA3Q9UI47 895 aa13.63□□□□□ -0.23
ERBB3-217ENST00000551085 EXOC6BQ9Y2D4 811 aa13.63□□□□□ -0.23
ERBB3-217ENST00000551085 PRDM15P57071 1507 aaPredicted RBP13.63□□□□□ -0.23
ERBB3-217ENST00000551085 SHANK2Q9UPX8 1470 aa13.63□□□□□ -0.23
ERBB3-217ENST00000551085 ADGBQ8N7X0 1667 aa13.63□□□□□ -0.23
ERBB3-217ENST00000551085 C10orf67Q8IYJ2 551 aa13.63□□□□□ -0.23
ERBB3-217ENST00000551085 ZDHHC9Q9Y397 364 aa13.63□□□□□ -0.23
ERBB3-217ENST00000551085 DNM1Q05193 864 aaKnown RBP13.62□□□□□ -0.23
ERBB3-217ENST00000551085 NCBP3Q53F19 620 aaKnown RBP13.62□□□□□ -0.23
ERBB3-217ENST00000551085 ESYT1Q9BSJ8 1104 aa13.62□□□□□ -0.23
ERBB3-217ENST00000551085 SNW1Q13573 536 aaKnown RBP13.62□□□□□ -0.23
ERBB3-217ENST00000551085 ANKRD44Q8N8A2 993 aa13.62□□□□□ -0.23
ERBB3-217ENST00000551085 SETQ01105 290 aaPredicted RBP13.62□□□□□ -0.23
ERBB3-217ENST00000551085 SF3A1Q15459 793 aaKnown RBP13.62□□□□□ -0.23
ERBB3-217ENST00000551085 DDX19AQ9NUU7 478 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms