RNA–Protein interactions for RNA: ENST00000551052.5

RPH3A-219, Transcript of rabphilin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPH3A, Length 2,961 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3A-219ENST00000551052 CFAP44Q96MT7 982 aa12.94□□□□□ -0.34
RPH3A-219ENST00000551052 IFT57Q9NWB7 429 aa12.94□□□□□ -0.34
RPH3A-219ENST00000551052 OVOS2A0A0J9YW53 1432 aa12.94□□□□□ -0.34
RPH3A-219ENST00000551052 OVOS2Q6IE36 1432 aa12.94□□□□□ -0.34
RPH3A-219ENST00000551052 MTHFSDQ2M296 383 aaKnown RBP12.94□□□□□ -0.34
RPH3A-219ENST00000551052 FOXD4L5Q5VV16 416 aaPredicted RBP12.94□□□□□ -0.34
RPH3A-219ENST00000551052 ABTB2Q8N961 1025 aa12.94□□□□□ -0.34
RPH3A-219ENST00000551052 FOXD4L4Q8WXT5 416 aaPredicted RBP12.94□□□□□ -0.34
RPH3A-219ENST00000551052 TNPO1Q92973 898 aaKnown RBP12.94□□□□□ -0.34
RPH3A-219ENST00000551052 PEAK1Q9H792 1746 aa12.94□□□□□ -0.34
RPH3A-219ENST00000551052 RIMS1Q86UR5 1692 aaKnown RBP12.93□□□□□ -0.34
RPH3A-219ENST00000551052 CT47B1P0C2W7 299 aaPredicted RBP12.93□□□□□ -0.34
RPH3A-219ENST00000551052 ZMYND15Q9H091 742 aa12.93□□□□□ -0.34
RPH3A-219ENST00000551052 KIF16BQ96L93 1317 aa12.93□□□□□ -0.34
RPH3A-219ENST00000551052 SETD1BQ9UPS6 1966 aaKnown RBP12.93□□□□□ -0.34
RPH3A-219ENST00000551052 ESPNB1AK53 854 aa12.93□□□□□ -0.34
RPH3A-219ENST00000551052 NCBP3Q53F19 620 aaKnown RBP12.93□□□□□ -0.34
RPH3A-219ENST00000551052 ANKRD45Q5TZF3 282 aa12.93□□□□□ -0.34
RPH3A-219ENST00000551052 EYA1Q99502 592 aa12.93□□□□□ -0.34
RPH3A-219ENST00000551052 CD2BP2O95400 341 aaKnown RBP12.93□□□□□ -0.34
RPH3A-219ENST00000551052 IPO8O15397 1037 aaKnown RBP12.92□□□□□ -0.34
RPH3A-219ENST00000551052 RBM10P98175 930 aaKnown RBP12.92□□□□□ -0.34
RPH3A-219ENST00000551052 MRE11P49959 708 aa12.92□□□□□ -0.34
RPH3A-219ENST00000551052 LMOD2Q6P5Q4 547 aa12.92□□□□□ -0.34
RPH3A-219ENST00000551052 PODXL2Q9NZ53 605 aa12.92□□□□□ -0.34
RPH3A-219ENST00000551052 GLIPR1L2Q4G1C9 344 aa12.91□□□□□ -0.34
RPH3A-219ENST00000551052 FSD2A1L4K1 749 aa12.91□□□□□ -0.34
RPH3A-219ENST00000551052 ALDH1L2Q3SY69 923 aa12.91□□□□□ -0.34
RPH3A-219ENST00000551052 ARHGAP23Q9P227 1491 aa12.91□□□□□ -0.34
RPH3A-219ENST00000551052 DIP2AQ14689 1571 aa12.91□□□□□ -0.34
RPH3A-219ENST00000551052 CLCN1P35523 988 aa12.9□□□□□ -0.34
RPH3A-219ENST00000551052 ZBTB7BO15156 539 aaPredicted RBP12.9□□□□□ -0.34
RPH3A-219ENST00000551052 ESCO1Q5FWF5 840 aa12.9□□□□□ -0.34
RPH3A-219ENST00000551052 CHAMP1Q96JM3 812 aa12.9□□□□□ -0.34
RPH3A-219ENST00000551052 SLIT1O75093 1534 aa12.9□□□□□ -0.35
RPH3A-219ENST00000551052 SIRT2Q8IXJ6 389 aa12.9□□□□□ -0.35
RPH3A-219ENST00000551052 SSH2Q76I76 1423 aa12.89□□□□□ -0.35
RPH3A-219ENST00000551052 SSFA2P28290 1259 aa12.89□□□□□ -0.35
RPH3A-219ENST00000551052 F6X3S4 739 aa12.89□□□□□ -0.35
RPH3A-219ENST00000551052 NRKQ7Z2Y5 1582 aa12.89□□□□□ -0.35
RPH3A-219ENST00000551052 FOXD4L6Q3SYB3 417 aaPredicted RBP12.88□□□□□ -0.35
RPH3A-219ENST00000551052 FOXD4L3Q6VB84 417 aaPredicted RBP12.88□□□□□ -0.35
RPH3A-219ENST00000551052 G2E3Q7L622 706 aa12.88□□□□□ -0.35
RPH3A-219ENST00000551052 MPNDQ8N594 471 aa12.88□□□□□ -0.35
RPH3A-219ENST00000551052 ORAI2Q96SN7 254 aa12.88□□□□□ -0.35
RPH3A-219ENST00000551052 TOPAZ1Q8N9V7 1692 aa12.88□□□□□ -0.35
RPH3A-219ENST00000551052 CALD1Q05682 793 aaKnown RBP12.88□□□□□ -0.35
RPH3A-219ENST00000551052 LMOD3Q0VAK6 560 aa12.88□□□□□ -0.35
RPH3A-219ENST00000551052 CEP170BQ9Y4F5 1589 aaPredicted RBP12.88□□□□□ -0.35
RPH3A-219ENST00000551052 ANKLE2Q86XL3 938 aa12.87□□□□□ -0.35
RPH3A-219ENST00000551052 DDX49Q9Y6V7 483 aaKnown RBP12.87□□□□□ -0.35
RPH3A-219ENST00000551052 HDAC1Q13547 482 aaPredicted RBP12.87□□□□□ -0.35
RPH3A-219ENST00000551052 SLC4A10Q6U841 1118 aa12.87□□□□□ -0.35
RPH3A-219ENST00000551052 USP31Q70CQ4 1352 aa12.87□□□□□ -0.35
RPH3A-219ENST00000551052 DDX11L8A8MPP1 907 aa12.87□□□□□ -0.35
RPH3A-219ENST00000551052 HOXC9P31274 260 aa12.87□□□□□ -0.35
RPH3A-219ENST00000551052 TSPYL4Q9UJ04 414 aa12.87□□□□□ -0.35
RPH3A-219ENST00000551052 CHL1O00533 1208 aa12.86□□□□□ -0.35
RPH3A-219ENST00000551052 SLC4A2P04920 1241 aa12.86□□□□□ -0.35
RPH3A-219ENST00000551052 PHF8Q9UPP1 1060 aa12.86□□□□□ -0.35
RPH3A-219ENST00000551052 SMC5Q8IY18 1101 aa12.86□□□□□ -0.35
RPH3A-219ENST00000551052 RTF1Q92541 710 aaKnown RBP12.86□□□□□ -0.35
RPH3A-219ENST00000551052 LRRC59Q96AG4 307 aaKnown RBP12.86□□□□□ -0.35
RPH3A-219ENST00000551052 FLT4P35916 1363 aa12.86□□□□□ -0.35
RPH3A-219ENST00000551052 PTCH1Q13635 1447 aa12.85□□□□□ -0.35
RPH3A-219ENST00000551052 DDX17Q92841 729 aaKnown RBP12.85□□□□□ -0.35
RPH3A-219ENST00000551052 TTC21AQ8NDW8 1320 aa12.85□□□□□ -0.35
RPH3A-219ENST00000551052 MCTP1Q6DN14 999 aa12.85□□□□□ -0.35
RPH3A-219ENST00000551052 PIK3C2AO00443 1686 aa12.85□□□□□ -0.35
RPH3A-219ENST00000551052 PSME1Q06323 249 aa12.84□□□□□ -0.35
RPH3A-219ENST00000551052 KIAA1211Q6ZU35 1233 aa12.84□□□□□ -0.35
RPH3A-219ENST00000551052 C16orf71Q8IYS4 520 aaPredicted RBP12.84□□□□□ -0.35
RPH3A-219ENST00000551052 GBP4Q96PP9 640 aa12.84□□□□□ -0.35
RPH3A-219ENST00000551052 SBNO1A3KN83 1393 aa12.84□□□□□ -0.35
RPH3A-219ENST00000551052 NOL8Q76FK4 1167 aaKnown RBP12.84□□□□□ -0.35
RPH3A-219ENST00000551052 CHD1LQ86WJ1 897 aa12.84□□□□□ -0.35
RPH3A-219ENST00000551052 GAS2L2Q8NHY3 880 aa12.84□□□□□ -0.35
RPH3A-219ENST00000551052 ABCC4O15439 1325 aa12.84□□□□□ -0.35
RPH3A-219ENST00000551052 AAMPQ13685 434 aa12.84□□□□□ -0.35
RPH3A-219ENST00000551052 ZNF428Q96B54 188 aa12.84□□□□□ -0.35
RPH3A-219ENST00000551052 MEIS3Q99687 375 aa12.84□□□□□ -0.35
RPH3A-219ENST00000551052 NUCB1Q02818 461 aa12.83□□□□□ -0.36
RPH3A-219ENST00000551052 CAVIN1Q6NZI2 390 aaKnown RBP12.83□□□□□ -0.36
RPH3A-219ENST00000551052 FAM13BQ9NYF5 915 aa12.83□□□□□ -0.36
RPH3A-219ENST00000551052 NASPP49321 788 aaPredicted RBP12.83□□□□□ -0.36
RPH3A-219ENST00000551052 SMARCA5O60264 1052 aaPredicted RBP12.82□□□□□ -0.36
RPH3A-219ENST00000551052 PKP1Q13835 747 aa12.82□□□□□ -0.36
RPH3A-219ENST00000551052 OTUD7AQ8TE49 926 aaPredicted RBP12.82□□□□□ -0.36
RPH3A-219ENST00000551052 ANP32BQ92688 251 aaKnown RBP12.82□□□□□ -0.36
RPH3A-219ENST00000551052 PIK3R4Q99570 1358 aa12.82□□□□□ -0.36
RPH3A-219ENST00000551052 CRB1P82279 1406 aa12.82□□□□□ -0.36
RPH3A-219ENST00000551052 NBPF6Q5VWK0 638 aa12.82□□□□□ -0.36
RPH3A-219ENST00000551052 IL17REQ8NFR9 667 aa12.82□□□□□ -0.36
RPH3A-219ENST00000551052 NBPF4Q96M43 638 aa12.82□□□□□ -0.36
RPH3A-219ENST00000551052 IGSF1Q8N6C5 1336 aa12.82□□□□□ -0.36
RPH3A-219ENST00000551052 R3HCC1Q9Y3T6 440 aaKnown RBP12.81□□□□□ -0.36
RPH3A-219ENST00000551052 MSNP26038 577 aaKnown RBP12.81□□□□□ -0.36
RPH3A-219ENST00000551052 RBM27Q9P2N5 1060 aaKnown RBP12.81□□□□□ -0.36
RPH3A-219ENST00000551052 MSH6P52701 1360 aa12.81□□□□□ -0.36
RPH3A-219ENST00000551052 BRPF1P55201 1214 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms