RNA–Protein interactions for RNA: ENST00000550317.1

CCDC63-203, Transcript of coiled-coil domain containing 63, humanhuman

TSL 1 (best)

Gene CCDC63, Length 805 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63-203ENST00000550317 MSH5O43196 834 aa25.67■■□□□ 1.7
CCDC63-203ENST00000550317 PRIM1P49642 420 aaKnown RBP25.67■■□□□ 1.7
CCDC63-203ENST00000550317 PRELPP51888 382 aa25.67■■□□□ 1.7
CCDC63-203ENST00000550317 JMYQ8N9B5 988 aa25.67■■□□□ 1.7
CCDC63-203ENST00000550317 CCNL1Q9UK58 526 aaPredicted RBP25.67■■□□□ 1.7
CCDC63-203ENST00000550317 TOMM70O94826 608 aa25.66■■□□□ 1.7
CCDC63-203ENST00000550317 ANKRD24Q8TF21 1146 aa25.66■■□□□ 1.7
CCDC63-203ENST00000550317 USP31Q70CQ4 1352 aa25.66■■□□□ 1.7
CCDC63-203ENST00000550317 MON2Q7Z3U7 1717 aa25.66■■□□□ 1.7
CCDC63-203ENST00000550317 IGSF1Q8N6C5 1336 aa25.65■■□□□ 1.7
CCDC63-203ENST00000550317 C5P01031 1676 aa25.65■■□□□ 1.7
CCDC63-203ENST00000550317 DDX54Q8TDD1 881 aaKnown RBP25.65■■□□□ 1.7
CCDC63-203ENST00000550317 SYTL4Q96C24 671 aaPredicted RBP25.63■■□□□ 1.69
CCDC63-203ENST00000550317 TAF1LQ8IZX4 1826 aa25.63■■□□□ 1.69
CCDC63-203ENST00000550317 KLRG1Q96E93 195 aa25.62■■□□□ 1.69
CCDC63-203ENST00000550317 WWC3Q9ULE0 1092 aa25.61■■□□□ 1.69
CCDC63-203ENST00000550317 TOGARAM1Q9Y4F4 1720 aa25.6■■□□□ 1.69
CCDC63-203ENST00000550317 FAM208AQ9UK61 1670 aaKnown RBP25.59■■□□□ 1.69
CCDC63-203ENST00000550317 HTRA3P83110 453 aa25.59■■□□□ 1.69
CCDC63-203ENST00000550317 TNS4Q8IZW8 715 aa25.59■■□□□ 1.69
CCDC63-203ENST00000550317 EVC2Q86UK5 1308 aa25.59■■□□□ 1.69
CCDC63-203ENST00000550317 KTN1Q86UP2 1357 aaKnown RBP25.58■■□□□ 1.69
CCDC63-203ENST00000550317 KIAA1551Q9HCM1 1747 aa25.55■■□□□ 1.68
CCDC63-203ENST00000550317 AMIGO3Q86WK7 504 aa25.55■■□□□ 1.68
CCDC63-203ENST00000550317 NMRK2Q9NPI5 230 aa25.54■■□□□ 1.68
CCDC63-203ENST00000550317 USP47Q96K76 1375 aa25.54■■□□□ 1.68
CCDC63-203ENST00000550317 UBR3Q6ZT12 1888 aa25.53■■□□□ 1.68
CCDC63-203ENST00000550317 FLAD1Q8NFF5 587 aa25.53■■□□□ 1.68
CCDC63-203ENST00000550317 NME9Q86XW9 330 aa25.52■■□□□ 1.68
CCDC63-203ENST00000550317 SBNO2Q9Y2G9 1366 aa25.52■■□□□ 1.68
CCDC63-203ENST00000550317 CD163L1Q9NR16 1453 aa25.52■■□□□ 1.68
CCDC63-203ENST00000550317 RBM46Q8TBY0 533 aaKnown RBP25.51■■□□□ 1.67
CCDC63-203ENST00000550317 MEGF6O75095 1541 aa25.51■■□□□ 1.67
CCDC63-203ENST00000550317 C4BP0C0L5 1744 aa25.51■■□□□ 1.67
CCDC63-203ENST00000550317 RGPD2P0DJD1 1756 aa25.5■■□□□ 1.67
CCDC63-203ENST00000550317 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.5■■□□□ 1.67
CCDC63-203ENST00000550317 KIF13BQ9NQT8 1826 aa25.49■■□□□ 1.67
CCDC63-203ENST00000550317 SLC34A2O95436 690 aa25.47■■□□□ 1.67
CCDC63-203ENST00000550317 ZCRB1Q8TBF4 217 aaKnown RBP25.47■■□□□ 1.67
CCDC63-203ENST00000550317 IP6K1Q92551 441 aa25.47■■□□□ 1.67
CCDC63-203ENST00000550317 PXDNLA1KZ92 1463 aa25.47■■□□□ 1.67
CCDC63-203ENST00000550317 SMIM5Q71RC9 77 aa25.44■■□□□ 1.66
CCDC63-203ENST00000550317 N4BP2Q86UW6 1770 aaPredicted RBP25.44■■□□□ 1.66
CCDC63-203ENST00000550317 FSTL1Q12841 308 aa25.43■■□□□ 1.66
CCDC63-203ENST00000550317 PALLDQ8WX93 1383 aa25.43■■□□□ 1.66
CCDC63-203ENST00000550317 LTV1Q96GA3 475 aaPredicted RBP25.42■■□□□ 1.66
CCDC63-203ENST00000550317 BRCA1P38398 1863 aaKnown RBP25.4■■□□□ 1.66
CCDC63-203ENST00000550317 MAP2P11137 1827 aaKnown RBP25.38■■□□□ 1.65
CCDC63-203ENST00000550317 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.38■■□□□ 1.65
CCDC63-203ENST00000550317 C10orf71Q711Q0 1435 aa25.37■■□□□ 1.65
CCDC63-203ENST00000550317 PKD1L3Q7Z443 1732 aa25.37■■□□□ 1.65
CCDC63-203ENST00000550317 AK7Q96M32 723 aa25.37■■□□□ 1.65
CCDC63-203ENST00000550317 ITGB4P16144 1822 aa25.36■■□□□ 1.65
CCDC63-203ENST00000550317 PHF14O94880 888 aa25.36■■□□□ 1.65
CCDC63-203ENST00000550317 HMGB2P26583 209 aaKnown RBP25.36■■□□□ 1.65
CCDC63-203ENST00000550317 EDC4Q6P2E9 1401 aaKnown RBP25.36■■□□□ 1.65
CCDC63-203ENST00000550317 NSD3Q9BZ95 1437 aa25.35■■□□□ 1.65
CCDC63-203ENST00000550317 SSFA2P28290 1259 aa25.34■■□□□ 1.65
CCDC63-203ENST00000550317 BCS1LQ9Y276 419 aa25.34■■□□□ 1.65
CCDC63-203ENST00000550317 KCPQ6ZWJ8 1503 aa25.33■■□□□ 1.65
CCDC63-203ENST00000550317 HSPA1AP0DMV8 641 aaKnown RBP25.33■■□□□ 1.65
CCDC63-203ENST00000550317 HSPA1BP0DMV9 641 aaKnown RBP25.33■■□□□ 1.65
CCDC63-203ENST00000550317 HOXC9P31274 260 aa25.33■■□□□ 1.65
CCDC63-203ENST00000550317 ARFGEF1Q9Y6D6 1849 aa25.33■■□□□ 1.64
CCDC63-203ENST00000550317 PLEKHG2Q9H7P9 1386 aa25.32■■□□□ 1.64
CCDC63-203ENST00000550317 TGFB2P61812 414 aa25.32■■□□□ 1.64
CCDC63-203ENST00000550317 C16orf71Q8IYS4 520 aaPredicted RBP25.32■■□□□ 1.64
CCDC63-203ENST00000550317 MAP3K19Q56UN5 1328 aa25.32■■□□□ 1.64
CCDC63-203ENST00000550317 ARHGAP27Q6ZUM4 889 aa25.31■■□□□ 1.64
CCDC63-203ENST00000550317 TNRC6CQ9HCJ0 1690 aaKnown RBP25.31■■□□□ 1.64
CCDC63-203ENST00000550317 A0A0G2JLW4 131 aa25.3■■□□□ 1.64
CCDC63-203ENST00000550317 C9orf131Q5VYM1 1079 aa25.3■■□□□ 1.64
CCDC63-203ENST00000550317 CGNL1Q0VF96 1302 aa25.3■■□□□ 1.64
CCDC63-203ENST00000550317 MMP10P09238 476 aa25.29■■□□□ 1.64
CCDC63-203ENST00000550317 NBPF6Q5VWK0 638 aa25.29■■□□□ 1.64
CCDC63-203ENST00000550317 MPRIPQ6WCQ1 1025 aa25.29■■□□□ 1.64
CCDC63-203ENST00000550317 NBPF4Q96M43 638 aa25.29■■□□□ 1.64
CCDC63-203ENST00000550317 LINC00116Q8NCU8 138 aa25.28■■□□□ 1.64
CCDC63-203ENST00000550317 A0A1W2PP64 1363 aa25.27■■□□□ 1.64
CCDC63-203ENST00000550317 FBLN1P23142 703 aa25.26■■□□□ 1.63
CCDC63-203ENST00000550317 USHBP1Q8N6Y0 703 aa25.25■■□□□ 1.63
CCDC63-203ENST00000550317 SMARCC1Q92922 1105 aaPredicted RBP25.25■■□□□ 1.63
CCDC63-203ENST00000550317 SLC12A5Q9H2X9 1139 aa25.25■■□□□ 1.63
CCDC63-203ENST00000550317 SBF1O95248 1867 aa25.25■■□□□ 1.63
CCDC63-203ENST00000550317 PCDH11XQ9BZA7 1347 aa25.24■■□□□ 1.63
CCDC63-203ENST00000550317 PCDH11YQ9BZA8 1340 aa25.24■■□□□ 1.63
CCDC63-203ENST00000550317 DPEP1P16444 411 aa25.24■■□□□ 1.63
CCDC63-203ENST00000550317 RRAGCQ9HB90 399 aa25.24■■□□□ 1.63
CCDC63-203ENST00000550317 KDM2BQ8NHM5 1336 aa25.23■■□□□ 1.63
CCDC63-203ENST00000550317 CYP27B1O15528 508 aa25.23■■□□□ 1.63
CCDC63-203ENST00000550317 KCNA3P22001 575 aa25.23■■□□□ 1.63
CCDC63-203ENST00000550317 HDGFL2Q7Z4V5 671 aaPredicted RBP25.23■■□□□ 1.63
CCDC63-203ENST00000550317 SMC1BQ8NDV3 1235 aa25.23■■□□□ 1.63
CCDC63-203ENST00000550317 FCHSD2O94868 740 aa25.22■■□□□ 1.63
CCDC63-203ENST00000550317 PIGBQ92521 554 aa25.22■■□□□ 1.63
CCDC63-203ENST00000550317 C4AP0C0L4 1744 aa25.21■■□□□ 1.63
CCDC63-203ENST00000550317 RTL1A6NKG5 1358 aa25.2■■□□□ 1.63
CCDC63-203ENST00000550317 ROCK2O75116 1388 aaKnown RBP25.2■■□□□ 1.63
CCDC63-203ENST00000550317 LOC102724428A0A0B4J2F2 783 aa25.2■■□□□ 1.62
CCDC63-203ENST00000550317 AMPHP49418 695 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms