RNA–Protein interactions for RNA: ENST00000550314.5

VDR-207, Transcript of vitamin D receptor, humanhuman

TSL 3

Gene VDR, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-207ENST00000550314 PLEKHO1Q53GL0 409 aaPredicted RBP17.88■□□□□ 0.45
VDR-207ENST00000550314 AEBP1Q8IUX7 1158 aa17.88■□□□□ 0.45
VDR-207ENST00000550314 PNNQ9H307 717 aaKnown RBP17.88■□□□□ 0.45
VDR-207ENST00000550314 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.88■□□□□ 0.45
VDR-207ENST00000550314 KDRP35968 1356 aa17.88■□□□□ 0.45
VDR-207ENST00000550314 OVOS2A0A0G2JMS6 1433 aa17.88■□□□□ 0.45
VDR-207ENST00000550314 TNS2Q63HR2 1409 aa17.88■□□□□ 0.45
VDR-207ENST00000550314 DDX54Q8TDD1 881 aaKnown RBP17.87■□□□□ 0.45
VDR-207ENST00000550314 MEGF6O75095 1541 aa17.87■□□□□ 0.45
VDR-207ENST00000550314 PARP4Q9UKK3 1724 aaKnown RBP17.86■□□□□ 0.45
VDR-207ENST00000550314 FCHSD2O94868 740 aa17.86■□□□□ 0.45
VDR-207ENST00000550314 FAM196AQ6ZSG2 479 aa17.86■□□□□ 0.45
VDR-207ENST00000550314 PCDH11XQ9BZA7 1347 aa17.85■□□□□ 0.45
VDR-207ENST00000550314 PCDH11YQ9BZA8 1340 aa17.85■□□□□ 0.45
VDR-207ENST00000550314 MRS2Q9HD23 443 aa17.85■□□□□ 0.45
VDR-207ENST00000550314 WNK3Q9BYP7 1800 aa17.84■□□□□ 0.45
VDR-207ENST00000550314 RGPD1P0DJD0 1748 aa17.84■□□□□ 0.45
VDR-207ENST00000550314 MARCH10Q8NA82 808 aaPredicted RBP17.83■□□□□ 0.44
VDR-207ENST00000550314 LRRC37A3O60309 1634 aa17.83■□□□□ 0.44
VDR-207ENST00000550314 PRKAR2BP31323 418 aa17.82■□□□□ 0.44
VDR-207ENST00000550314 C1orf141Q5JVX7 400 aa17.82■□□□□ 0.44
VDR-207ENST00000550314 IFNL2Q8IZJ0 200 aa17.82■□□□□ 0.44
VDR-207ENST00000550314 RSPH6AQ9H0K4 717 aa17.82■□□□□ 0.44
VDR-207ENST00000550314 FAM182BQ5T319 152 aa17.81■□□□□ 0.44
VDR-207ENST00000550314 ZNF530Q6P9A1 599 aaPredicted RBP17.81■□□□□ 0.44
VDR-207ENST00000550314 HSP90AB1P08238 724 aaKnown RBP17.8■□□□□ 0.44
VDR-207ENST00000550314 GAS2L2Q8NHY3 880 aa17.8■□□□□ 0.44
VDR-207ENST00000550314 BRWD3Q6RI45 1802 aa17.79■□□□□ 0.44
VDR-207ENST00000550314 MAPK8IP3Q9UPT6 1336 aa17.79■□□□□ 0.44
VDR-207ENST00000550314 CYP27B1O15528 508 aa17.78■□□□□ 0.44
VDR-207ENST00000550314 PHKG2P15735 406 aa17.78■□□□□ 0.44
VDR-207ENST00000550314 SF3B2Q13435 895 aaKnown RBP17.78■□□□□ 0.44
VDR-207ENST00000550314 CCER2I3L3R5 266 aa17.77■□□□□ 0.44
VDR-207ENST00000550314 MTHFSDQ2M296 383 aaKnown RBP17.77■□□□□ 0.44
VDR-207ENST00000550314 CCDC184Q52MB2 194 aa17.77■□□□□ 0.44
VDR-207ENST00000550314 AKAP4Q5JQC9 854 aa17.77■□□□□ 0.44
VDR-207ENST00000550314 CCDC125Q86Z20 511 aa17.77■□□□□ 0.44
VDR-207ENST00000550314 ADAMTS8Q9UP79 889 aa17.77■□□□□ 0.44
VDR-207ENST00000550314 BCL9O00512 1426 aa17.77■□□□□ 0.44
VDR-207ENST00000550314 PKD1L3Q7Z443 1732 aa17.75■□□□□ 0.43
VDR-207ENST00000550314 NKX1-1Q15270 411 aaPredicted RBP17.75■□□□□ 0.43
VDR-207ENST00000550314 PNISRQ8TF01 805 aaKnown RBP17.75■□□□□ 0.43
VDR-207ENST00000550314 TRIM37O94972 964 aa17.74■□□□□ 0.43
VDR-207ENST00000550314 RUNDC1Q96C34 613 aa17.74■□□□□ 0.43
VDR-207ENST00000550314 DCAF5Q96JK2 942 aa17.74■□□□□ 0.43
VDR-207ENST00000550314 PHACTR3Q96KR7 559 aa17.74■□□□□ 0.43
VDR-207ENST00000550314 PLEKHF1Q96S99 279 aa17.74■□□□□ 0.43
VDR-207ENST00000550314 MIER1Q8N108 512 aa17.73■□□□□ 0.43
VDR-207ENST00000550314 SYTL4Q96C24 671 aaPredicted RBP17.73■□□□□ 0.43
VDR-207ENST00000550314 ACSBG1Q96GR2 724 aa17.73■□□□□ 0.43
VDR-207ENST00000550314 BCL11BQ9C0K0 894 aaPredicted RBP17.73■□□□□ 0.43
VDR-207ENST00000550314 GNAT3A8MTJ3 354 aa17.72■□□□□ 0.43
VDR-207ENST00000550314 RTF1Q92541 710 aaKnown RBP17.72■□□□□ 0.43
VDR-207ENST00000550314 UPF1Q92900 1129 aaKnown RBP eCLIP17.72■□□□□ 0.43
VDR-207ENST00000550314 PRIM1P49642 420 aaKnown RBP17.71■□□□□ 0.43
VDR-207ENST00000550314 CCDC146Q8IYE0 955 aa17.71■□□□□ 0.43
VDR-207ENST00000550314 MAP3K5Q99683 1374 aa17.7■□□□□ 0.42
VDR-207ENST00000550314 ERVV-2B6SEH9 535 aa17.7■□□□□ 0.42
VDR-207ENST00000550314 SOCS7O14512 581 aa17.7■□□□□ 0.42
VDR-207ENST00000550314 NFE2L2Q16236 605 aa17.7■□□□□ 0.42
VDR-207ENST00000550314 MPRIPQ6WCQ1 1025 aa17.7■□□□□ 0.42
VDR-207ENST00000550314 FAM9BQ8IZU0 186 aa17.7■□□□□ 0.42
VDR-207ENST00000550314 SHANK3Q9BYB0 1731 aa17.69■□□□□ 0.42
VDR-207ENST00000550314 HTATSF1O43719 755 aaKnown RBP17.69■□□□□ 0.42
VDR-207ENST00000550314 APBA3O96018 575 aa17.69■□□□□ 0.42
VDR-207ENST00000550314 BAG6P46379 1132 aa17.69■□□□□ 0.42
VDR-207ENST00000550314 TMOD3Q9NYL9 352 aa17.69■□□□□ 0.42
VDR-207ENST00000550314 KCNQ2O43526 872 aa17.68■□□□□ 0.42
VDR-207ENST00000550314 CABP4P57796 275 aa17.68■□□□□ 0.42
VDR-207ENST00000550314 LMOD3Q0VAK6 560 aa17.68■□□□□ 0.42
VDR-207ENST00000550314 RNMTO43148 476 aaKnown RBP17.67■□□□□ 0.42
VDR-207ENST00000550314 TMPOP42166 694 aaKnown RBP17.66■□□□□ 0.42
VDR-207ENST00000550314 RIPK4P57078 832 aa17.66■□□□□ 0.42
VDR-207ENST00000550314 TEFQ10587 303 aa17.65■□□□□ 0.42
VDR-207ENST00000550314 LGR6Q9HBX8 967 aa17.65■□□□□ 0.42
VDR-207ENST00000550314 KDM6AO15550 1401 aaPredicted RBP17.64■□□□□ 0.42
VDR-207ENST00000550314 APAF1O14727 1248 aa17.64■□□□□ 0.41
VDR-207ENST00000550314 NEUROD2Q15784 382 aa17.64■□□□□ 0.41
VDR-207ENST00000550314 PLSCR1O15162 318 aa17.63■□□□□ 0.41
VDR-207ENST00000550314 NFATC2IPQ8NCF5 419 aa17.63■□□□□ 0.41
VDR-207ENST00000550314 IL17REQ8NFR9 667 aa17.63■□□□□ 0.41
VDR-207ENST00000550314 PIGBQ92521 554 aa17.63■□□□□ 0.41
VDR-207ENST00000550314 SMARCC1Q92922 1105 aaPredicted RBP17.63■□□□□ 0.41
VDR-207ENST00000550314 SLC52A2Q9HAB3 445 aa17.63■□□□□ 0.41
VDR-207ENST00000550314 NHSQ6T4R5 1651 aa17.63■□□□□ 0.41
VDR-207ENST00000550314 KAT6BQ8WYB5 2073 aa17.62■□□□□ 0.41
VDR-207ENST00000550314 DOT1LQ8TEK3 1739 aa17.62■□□□□ 0.41
VDR-207ENST00000550314 MCM10Q7L590 875 aa17.62■□□□□ 0.41
VDR-207ENST00000550314 PTF1AQ7RTS3 328 aa17.62■□□□□ 0.41
VDR-207ENST00000550314 RRP7AQ9Y3A4 280 aaKnown RBP17.62■□□□□ 0.41
VDR-207ENST00000550314 SBF2Q86WG5 1849 aa17.61■□□□□ 0.41
VDR-207ENST00000550314 HMGB2P26583 209 aaKnown RBP17.6■□□□□ 0.41
VDR-207ENST00000550314 EN1Q05925 392 aaPredicted RBP17.6■□□□□ 0.41
VDR-207ENST00000550314 DEFB132Q7Z7B7 95 aa17.6■□□□□ 0.41
VDR-207ENST00000550314 CEMIPQ8WUJ3 1361 aa17.59■□□□□ 0.41
VDR-207ENST00000550314 DCTN1Q14203 1278 aa17.59■□□□□ 0.41
VDR-207ENST00000550314 NGEFQ8N5V2 710 aa17.59■□□□□ 0.41
VDR-207ENST00000550314 EP400Q96L91 3159 aa17.59■□□□□ 0.41
VDR-207ENST00000550314 CALD1Q05682 793 aaKnown RBP17.58■□□□□ 0.4
VDR-207ENST00000550314 NCBP3Q53F19 620 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms