RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 SBF2Q86WG5 1849 aa15.28■□□□□ 0.04
RAB5B-208ENST00000550283 RGPD1P0DJD0 1748 aa15.28■□□□□ 0.04
RAB5B-208ENST00000550283 IGSF1Q8N6C5 1336 aa15.27■□□□□ 0.04
RAB5B-208ENST00000550283 EN1Q05925 392 aaPredicted RBP15.27■□□□□ 0.04
RAB5B-208ENST00000550283 DDX54Q8TDD1 881 aaKnown RBP15.27■□□□□ 0.04
RAB5B-208ENST00000550283 ACSBG1Q96GR2 724 aa15.26■□□□□ 0.03
RAB5B-208ENST00000550283 BCL9O00512 1426 aa15.25■□□□□ 0.03
RAB5B-208ENST00000550283 CYP27B1O15528 508 aa15.24■□□□□ 0.03
RAB5B-208ENST00000550283 PPP2R1AP30153 589 aa15.24■□□□□ 0.03
RAB5B-208ENST00000550283 EZH2Q15910 746 aaKnown RBP15.24■□□□□ 0.03
RAB5B-208ENST00000550283 ZCRB1Q8TBF4 217 aaKnown RBP15.24■□□□□ 0.03
RAB5B-208ENST00000550283 PKD1L3Q7Z443 1732 aa15.23■□□□□ 0.03
RAB5B-208ENST00000550283 CCDC125Q86Z20 511 aa15.23■□□□□ 0.03
RAB5B-208ENST00000550283 CAMKK2Q96RR4 588 aa15.23■□□□□ 0.03
RAB5B-208ENST00000550283 PARD3Q8TEW0 1356 aa15.23■□□□□ 0.03
RAB5B-208ENST00000550283 APBA3O96018 575 aa15.22■□□□□ 0.03
RAB5B-208ENST00000550283 TATP17735 454 aaPredicted RBP15.22■□□□□ 0.03
RAB5B-208ENST00000550283 RAPGEF4Q8WZA2 1011 aa15.22■□□□□ 0.03
RAB5B-208ENST00000550283 TOGARAM1Q9Y4F4 1720 aa15.22■□□□□ 0.03
RAB5B-208ENST00000550283 NHSQ6T4R5 1651 aa15.22■□□□□ 0.03
RAB5B-208ENST00000550283 DOT1LQ8TEK3 1739 aa15.2■□□□□ 0.02
RAB5B-208ENST00000550283 HMOX1P09601 288 aa15.2■□□□□ 0.02
RAB5B-208ENST00000550283 SULT6B1Q6IMI4 303 aa15.2■□□□□ 0.02
RAB5B-208ENST00000550283 PROM2Q8N271 834 aa15.2■□□□□ 0.02
RAB5B-208ENST00000550283 BCL11BQ9C0K0 894 aaPredicted RBP15.2■□□□□ 0.02
RAB5B-208ENST00000550283 SF3B2Q13435 895 aaKnown RBP15.19■□□□□ 0.02
RAB5B-208ENST00000550283 KDRP35968 1356 aa15.19■□□□□ 0.02
RAB5B-208ENST00000550283 BAG6P46379 1132 aa15.18■□□□□ 0.02
RAB5B-208ENST00000550283 PRIM1P49642 420 aaKnown RBP15.18■□□□□ 0.02
RAB5B-208ENST00000550283 RREB1Q92766 1687 aa15.18■□□□□ 0.02
RAB5B-208ENST00000550283 DIAPH1O60610 1272 aaKnown RBP15.17■□□□□ 0.02
RAB5B-208ENST00000550283 BTAF1O14981 1849 aa15.17■□□□□ 0.02
RAB5B-208ENST00000550283 NUP188Q5SRE5 1749 aa15.17■□□□□ 0.02
RAB5B-208ENST00000550283 ZNF316A6NFI3 1004 aaPredicted RBP15.16■□□□□ 0.02
RAB5B-208ENST00000550283 KCNA4P22459 653 aa15.16■□□□□ 0.02
RAB5B-208ENST00000550283 PCDH11XQ9BZA7 1347 aa15.16■□□□□ 0.02
RAB5B-208ENST00000550283 PCDH11YQ9BZA8 1340 aa15.16■□□□□ 0.02
RAB5B-208ENST00000550283 PHKG2P15735 406 aa15.15■□□□□ 0.02
RAB5B-208ENST00000550283 KCNQ4P56696 695 aa15.15■□□□□ 0.02
RAB5B-208ENST00000550283 NKX1-1Q15270 411 aaPredicted RBP15.14■□□□□ 0.01
RAB5B-208ENST00000550283 ANO8Q9HCE9 1232 aaPredicted RBP15.14■□□□□ 0.01
RAB5B-208ENST00000550283 KDM6AO15550 1401 aaPredicted RBP15.14■□□□□ 0.01
RAB5B-208ENST00000550283 PSDA5PKW4 1024 aaPredicted RBP15.13■□□□□ 0.01
RAB5B-208ENST00000550283 U2SURPO15042 1029 aaKnown RBP15.13■□□□□ 0.01
RAB5B-208ENST00000550283 MAPK8IP2Q13387 824 aaPredicted RBP15.13■□□□□ 0.01
RAB5B-208ENST00000550283 SYTL4Q96C24 671 aaPredicted RBP15.13■□□□□ 0.01
RAB5B-208ENST00000550283 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.13■□□□□ 0.01
RAB5B-208ENST00000550283 PLSCR1O15162 318 aa15.12■□□□□ 0.01
RAB5B-208ENST00000550283 ZNF530Q6P9A1 599 aaPredicted RBP15.12■□□□□ 0.01
RAB5B-208ENST00000550283 LRRC4BQ9NT99 713 aa15.12■□□□□ 0.01
RAB5B-208ENST00000550283 SPG7Q9UQ90 795 aa15.12■□□□□ 0.01
RAB5B-208ENST00000550283 PHACTR3Q96KR7 559 aa15.11■□□□□ 0.01
RAB5B-208ENST00000550283 RGPD3A6NKT7 1758 aaPredicted RBP15.11■□□□□ 0.01
RAB5B-208ENST00000550283 RGPD4Q7Z3J3 1758 aa15.11■□□□□ 0.01
RAB5B-208ENST00000550283 ITGB4P16144 1822 aa15.1■□□□□ 0.01
RAB5B-208ENST00000550283 TXNRD1Q16881 649 aa15.1■□□□□ 0.01
RAB5B-208ENST00000550283 MTHFSDQ2M296 383 aaKnown RBP15.1■□□□□ 0.01
RAB5B-208ENST00000550283 PIGBQ92521 554 aa15.1■□□□□ 0.01
RAB5B-208ENST00000550283 RSPH6AQ9H0K4 717 aa15.1■□□□□ 0.01
RAB5B-208ENST00000550283 R3HDM1Q15032 1099 aaKnown RBP15.09■□□□□ 0.01
RAB5B-208ENST00000550283 PLEKHO1Q53GL0 409 aaPredicted RBP15.09■□□□□ 0.01
RAB5B-208ENST00000550283 MPRIPQ6WCQ1 1025 aa15.09■□□□□ 0.01
RAB5B-208ENST00000550283 IFNL2Q8IZJ0 200 aa15.09■□□□□ 0.01
RAB5B-208ENST00000550283 PDGFDQ9GZP0 370 aaPredicted RBP15.09■□□□□ 0.01
RAB5B-208ENST00000550283 PRKRIP1Q9H875 184 aaPredicted RBP15.09■□□□□ 0.01
RAB5B-208ENST00000550283 KAT6BQ8WYB5 2073 aa15.08■□□□□ 0.01
RAB5B-208ENST00000550283 LRP5O75197 1615 aa15.08■□□□□ 0
RAB5B-208ENST00000550283 PAPPAQ13219 1627 aa15.08■□□□□ 0
RAB5B-208ENST00000550283 CCDC184Q52MB2 194 aa15.08■□□□□ 0
RAB5B-208ENST00000550283 LGR6Q9HBX8 967 aa15.08■□□□□ 0
RAB5B-208ENST00000550283 PRKAR2BP31323 418 aa15.07■□□□□ 0
RAB5B-208ENST00000550283 RALBP1Q15311 655 aa15.07■□□□□ 0
RAB5B-208ENST00000550283 CFAP53Q96M91 514 aa15.07■□□□□ 0
RAB5B-208ENST00000550283 LY75O60449 1722 aa15.06■□□□□ 0
RAB5B-208ENST00000550283 U2AF1L5P0DN76 240 aaPredicted RBP15.06■□□□□ 0
RAB5B-208ENST00000550283 U2AF1Q01081 240 aaKnown RBP eCLIP15.06■□□□□ 0
RAB5B-208ENST00000550283 ZNF827Q17R98 1081 aa15.06■□□□□ 0
RAB5B-208ENST00000550283 IFFO2Q5TF58 517 aa15.06■□□□□ 0
RAB5B-208ENST00000550283 ASAP1Q9ULH1 1129 aa15.06■□□□□ 0
RAB5B-208ENST00000550283 MYBBP1AQ9BQG0 1328 aaKnown RBP15.06■□□□□ 0
RAB5B-208ENST00000550283 PLEKHG2Q9H7P9 1386 aa15.06■□□□□ 0
RAB5B-208ENST00000550283 AMOTQ4VCS5 1084 aa15.05■□□□□ -0
RAB5B-208ENST00000550283 ADAMTS7Q9UKP4 1686 aa15.04■□□□□ -0
RAB5B-208ENST00000550283 NCBP3Q53F19 620 aaKnown RBP15.04■□□□□ -0
RAB5B-208ENST00000550283 SLC4A9Q96Q91 983 aa15.04■□□□□ -0
RAB5B-208ENST00000550283 ATG3Q9NT62 314 aa15.04■□□□□ -0
RAB5B-208ENST00000550283 PALLDQ8WX93 1383 aa15.03■□□□□ -0
RAB5B-208ENST00000550283 SMIM5Q71RC9 77 aa15.03■□□□□ -0
RAB5B-208ENST00000550283 DCAF5Q96JK2 942 aa15.03■□□□□ -0
RAB5B-208ENST00000550283 SCN11AQ9UI33 1791 aa15.03■□□□□ -0
RAB5B-208ENST00000550283 RNMTO43148 476 aaKnown RBP15.02■□□□□ -0
RAB5B-208ENST00000550283 AKAP4Q5JQC9 854 aa15.02■□□□□ -0
RAB5B-208ENST00000550283 C1orf141Q5JVX7 400 aa15.02■□□□□ -0
RAB5B-208ENST00000550283 AMIGO3Q86WK7 504 aa15.02■□□□□ -0
RAB5B-208ENST00000550283 IL17REQ8NFR9 667 aa15.02■□□□□ -0
RAB5B-208ENST00000550283 PLEKHF1Q96S99 279 aa15.02■□□□□ -0
RAB5B-208ENST00000550283 NFATC2IPQ8NCF5 419 aa15.01□□□□□ -0.01
RAB5B-208ENST00000550283 TMOD3Q9NYL9 352 aa15.01□□□□□ -0.01
RAB5B-208ENST00000550283 NUDCQ9Y266 331 aa15.01□□□□□ -0.01
RAB5B-208ENST00000550283 MRC1P22897 1456 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms