RNA–Protein interactions for RNA: ENST00000549935.6

CALCOCO1-217, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5

Gene CALCOCO1, Length 2,112 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-217ENST00000549935 FOXD4L1Q9NU39 408 aa15.74■□□□□ 0.11
CALCOCO1-217ENST00000549935 METP08581 1390 aa15.74■□□□□ 0.11
CALCOCO1-217ENST00000549935 FAM83GA6ND36 823 aa15.74■□□□□ 0.11
CALCOCO1-217ENST00000549935 ZSCAN23Q3MJ62 389 aa15.74■□□□□ 0.11
CALCOCO1-217ENST00000549935 COG3Q96JB2 828 aa15.74■□□□□ 0.11
CALCOCO1-217ENST00000549935 MAP7D2Q96T17 732 aa15.74■□□□□ 0.11
CALCOCO1-217ENST00000549935 SPATA31D1Q6ZQQ2 1576 aa15.73■□□□□ 0.11
CALCOCO1-217ENST00000549935 GSPT1P15170 499 aaKnown RBP15.73■□□□□ 0.11
CALCOCO1-217ENST00000549935 MCM5P33992 734 aa15.73■□□□□ 0.11
CALCOCO1-217ENST00000549935 C8orf58Q8NAV2 365 aa15.73■□□□□ 0.11
CALCOCO1-217ENST00000549935 USP26Q9BXU7 913 aa15.73■□□□□ 0.11
CALCOCO1-217ENST00000549935 PLEKHM2Q8IWE5 1019 aa15.73■□□□□ 0.11
CALCOCO1-217ENST00000549935 NUDT16Q96DE0 195 aaKnown RBP15.73■□□□□ 0.11
CALCOCO1-217ENST00000549935 DLG5Q8TDM6 1919 aa15.73■□□□□ 0.11
CALCOCO1-217ENST00000549935 TSPOAP1O95153 1857 aa15.72■□□□□ 0.11
CALCOCO1-217ENST00000549935 LMOD3Q0VAK6 560 aa15.72■□□□□ 0.11
CALCOCO1-217ENST00000549935 DCTN1Q14203 1278 aa15.72■□□□□ 0.11
CALCOCO1-217ENST00000549935 API5Q9BZZ5 524 aaKnown RBP15.72■□□□□ 0.11
CALCOCO1-217ENST00000549935 DCTPP1Q9H773 170 aa15.72■□□□□ 0.11
CALCOCO1-217ENST00000549935 AATKQ6ZMQ8 1374 aa15.72■□□□□ 0.11
CALCOCO1-217ENST00000549935 CPS1P31327 1500 aa15.72■□□□□ 0.11
CALCOCO1-217ENST00000549935 TTC22Q5TAA0 569 aa15.71■□□□□ 0.11
CALCOCO1-217ENST00000549935 PPP6R1Q9UPN7 881 aa15.71■□□□□ 0.11
CALCOCO1-217ENST00000549935 NRXN3Q9Y4C0 1643 aa15.71■□□□□ 0.11
CALCOCO1-217ENST00000549935 MCTP1Q6DN14 999 aa15.7■□□□□ 0.1
CALCOCO1-217ENST00000549935 AGLP35573 1532 aa15.7■□□□□ 0.1
CALCOCO1-217ENST00000549935 INTS3Q68E01 1043 aaKnown RBP15.7■□□□□ 0.1
CALCOCO1-217ENST00000549935 CCDC61Q9Y6R9 512 aa15.7■□□□□ 0.1
CALCOCO1-217ENST00000549935 CAVIN1Q6NZI2 390 aaKnown RBP15.69■□□□□ 0.1
CALCOCO1-217ENST00000549935 RBSNQ9H1K0 784 aa15.69■□□□□ 0.1
CALCOCO1-217ENST00000549935 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.68■□□□□ 0.1
CALCOCO1-217ENST00000549935 CSPP1Q1MSJ5 1256 aa15.68■□□□□ 0.1
CALCOCO1-217ENST00000549935 MON2Q7Z3U7 1717 aa15.68■□□□□ 0.1
CALCOCO1-217ENST00000549935 ST18O60284 1047 aa15.67■□□□□ 0.1
CALCOCO1-217ENST00000549935 DIP2BQ9P265 1576 aa15.67■□□□□ 0.1
CALCOCO1-217ENST00000549935 PRIM1P49642 420 aaKnown RBP15.67■□□□□ 0.1
CALCOCO1-217ENST00000549935 MTERF4Q7Z6M4 381 aaKnown RBP15.67■□□□□ 0.1
CALCOCO1-217ENST00000549935 AEBP1Q8IUX7 1158 aa15.67■□□□□ 0.1
CALCOCO1-217ENST00000549935 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.67■□□□□ 0.1
CALCOCO1-217ENST00000549935 ZKSCAN5Q9Y2L8 839 aa15.67■□□□□ 0.1
CALCOCO1-217ENST00000549935 KNDC1Q76NI1 1749 aa15.66■□□□□ 0.1
CALCOCO1-217ENST00000549935 LRSAM1Q6UWE0 723 aa15.66■□□□□ 0.1
CALCOCO1-217ENST00000549935 CASC1Q6TDU7 716 aa15.65■□□□□ 0.1
CALCOCO1-217ENST00000549935 RPAP2Q8IXW5 612 aaPredicted RBP15.65■□□□□ 0.1
CALCOCO1-217ENST00000549935 GPT2Q8TD30 523 aa15.65■□□□□ 0.1
CALCOCO1-217ENST00000549935 C3P01024 1663 aa15.65■□□□□ 0.1
CALCOCO1-217ENST00000549935 KRT24Q2M2I5 525 aa15.65■□□□□ 0.1
CALCOCO1-217ENST00000549935 SULT6B1Q6IMI4 303 aa15.65■□□□□ 0.1
CALCOCO1-217ENST00000549935 ANKRD44Q8N8A2 993 aa15.65■□□□□ 0.1
CALCOCO1-217ENST00000549935 PRR36Q9H6K5 1346 aa15.65■□□□□ 0.1
CALCOCO1-217ENST00000549935 ITSN1Q15811 1721 aa15.65■□□□□ 0.1
CALCOCO1-217ENST00000549935 ZDHHC9Q9Y397 364 aa15.64■□□□□ 0.09
CALCOCO1-217ENST00000549935 AKAP12Q02952 1782 aa15.64■□□□□ 0.09
CALCOCO1-217ENST00000549935 ATP10DQ9P241 1426 aa15.64■□□□□ 0.09
CALCOCO1-217ENST00000549935 REC8O95072 547 aa15.64■□□□□ 0.09
CALCOCO1-217ENST00000549935 EIF4A2Q14240 407 aaKnown RBP15.64■□□□□ 0.09
CALCOCO1-217ENST00000549935 CCDC39Q9UFE4 941 aa15.64■□□□□ 0.09
CALCOCO1-217ENST00000549935 DYNC1I1O14576 645 aa15.63■□□□□ 0.09
CALCOCO1-217ENST00000549935 MBD3O95983 291 aa15.63■□□□□ 0.09
CALCOCO1-217ENST00000549935 PKP1Q13835 747 aa15.63■□□□□ 0.09
CALCOCO1-217ENST00000549935 PRPF40AO75400 957 aaKnown RBP15.62■□□□□ 0.09
CALCOCO1-217ENST00000549935 NCLP19338 710 aaKnown RBP15.62■□□□□ 0.09
CALCOCO1-217ENST00000549935 MCM10Q7L590 875 aa15.62■□□□□ 0.09
CALCOCO1-217ENST00000549935 ESF1Q9H501 851 aaKnown RBP15.62■□□□□ 0.09
CALCOCO1-217ENST00000549935 R3HCC1Q9Y3T6 440 aaKnown RBP15.62■□□□□ 0.09
CALCOCO1-217ENST00000549935 AK9Q5TCS8 1911 aa15.62■□□□□ 0.09
CALCOCO1-217ENST00000549935 TECPR2O15040 1411 aa15.62■□□□□ 0.09
CALCOCO1-217ENST00000549935 NUTM2FA1L443 756 aa15.61■□□□□ 0.09
CALCOCO1-217ENST00000549935 SDSP20132 328 aa15.61■□□□□ 0.09
CALCOCO1-217ENST00000549935 HAP1P54257 671 aaPredicted RBP15.61■□□□□ 0.09
CALCOCO1-217ENST00000549935 NRKQ7Z2Y5 1582 aa15.61■□□□□ 0.09
CALCOCO1-217ENST00000549935 MCM2P49736 904 aa15.61■□□□□ 0.09
CALCOCO1-217ENST00000549935 C16orf71Q8IYS4 520 aaPredicted RBP15.61■□□□□ 0.09
CALCOCO1-217ENST00000549935 TMEM63CQ9P1W3 806 aa15.61■□□□□ 0.09
CALCOCO1-217ENST00000549935 ROBO2Q9HCK4 1378 aa15.6■□□□□ 0.09
CALCOCO1-217ENST00000549935 ZGPATQ8N5A5 531 aaKnown RBP15.6■□□□□ 0.09
CALCOCO1-217ENST00000549935 SIRT1Q96EB6 747 aa15.6■□□□□ 0.09
CALCOCO1-217ENST00000549935 OSBPL3Q9H4L5 887 aa15.6■□□□□ 0.09
CALCOCO1-217ENST00000549935 RGS12O14924 1447 aa15.6■□□□□ 0.09
CALCOCO1-217ENST00000549935 TTC21BQ7Z4L5 1316 aa15.59■□□□□ 0.09
CALCOCO1-217ENST00000549935 CHL1O00533 1208 aa15.59■□□□□ 0.09
CALCOCO1-217ENST00000549935 SOX12O15370 315 aa15.59■□□□□ 0.09
CALCOCO1-217ENST00000549935 HDGFP51858 240 aaKnown RBP15.59■□□□□ 0.09
CALCOCO1-217ENST00000549935 MSH6P52701 1360 aa15.59■□□□□ 0.09
CALCOCO1-217ENST00000549935 UQCRHLA0A096LP55 91 aa15.59■□□□□ 0.09
CALCOCO1-217ENST00000549935 ERC2O15083 957 aa15.59■□□□□ 0.09
CALCOCO1-217ENST00000549935 UQCRHP07919 91 aa15.59■□□□□ 0.09
CALCOCO1-217ENST00000549935 XPCQ01831 940 aaPredicted RBP15.59■□□□□ 0.09
CALCOCO1-217ENST00000549935 CEP85Q6P2H3 762 aa15.59■□□□□ 0.09
CALCOCO1-217ENST00000549935 SASS6Q6UVJ0 657 aa15.59■□□□□ 0.09
CALCOCO1-217ENST00000549935 ACEP12821 1306 aa15.58■□□□□ 0.09
CALCOCO1-217ENST00000549935 APBB1O00213 710 aa15.58■□□□□ 0.08
CALCOCO1-217ENST00000549935 HSP90AB2PQ58FF8 381 aa15.58■□□□□ 0.08
CALCOCO1-217ENST00000549935 OTUD7AQ8TE49 926 aaPredicted RBP15.58■□□□□ 0.08
CALCOCO1-217ENST00000549935 IL17RAQ96F46 866 aa15.58■□□□□ 0.08
CALCOCO1-217ENST00000549935 RBM27Q9P2N5 1060 aaKnown RBP15.58■□□□□ 0.08
CALCOCO1-217ENST00000549935 BRD1O95696 1058 aa15.57■□□□□ 0.08
CALCOCO1-217ENST00000549935 CUL4AQ13619 759 aa15.57■□□□□ 0.08
CALCOCO1-217ENST00000549935 INTS4Q96HW7 963 aaKnown RBP15.57■□□□□ 0.08
CALCOCO1-217ENST00000549935 RTL1A6NKG5 1358 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 133.2 ms