RNA–Protein interactions for RNA: ENST00000549688.1

CALCOCO1-215, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 4

Gene CALCOCO1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-215ENST00000549688 NFE2L2Q16236 605 aa9.38□□□□□ -0.91
CALCOCO1-215ENST00000549688 AEBP1Q8IUX7 1158 aa9.38□□□□□ -0.91
CALCOCO1-215ENST00000549688 CCDC146Q8IYE0 955 aa9.38□□□□□ -0.91
CALCOCO1-215ENST00000549688 TRPC5Q9UL62 973 aaPredicted RBP9.38□□□□□ -0.91
CALCOCO1-215ENST00000549688 OVOS2A0A0G2JMS6 1433 aa9.38□□□□□ -0.91
CALCOCO1-215ENST00000549688 AFF2P51816 1311 aa9.37□□□□□ -0.91
CALCOCO1-215ENST00000549688 SPATA31A1Q5TZJ5 1347 aa9.37□□□□□ -0.91
CALCOCO1-215ENST00000549688 SPATA31A5Q5VU36 1347 aa9.37□□□□□ -0.91
CALCOCO1-215ENST00000549688 SPATA31A7Q8IWB4 1347 aa9.37□□□□□ -0.91
CALCOCO1-215ENST00000549688 PCDH11XQ9BZA7 1347 aa9.37□□□□□ -0.91
CALCOCO1-215ENST00000549688 PCDH11YQ9BZA8 1340 aa9.37□□□□□ -0.91
CALCOCO1-215ENST00000549688 HSP90AB1P08238 724 aaKnown RBP9.37□□□□□ -0.91
CALCOCO1-215ENST00000549688 TMPOP42166 694 aaKnown RBP9.37□□□□□ -0.91
CALCOCO1-215ENST00000549688 C1orf141Q5JVX7 400 aa9.37□□□□□ -0.91
CALCOCO1-215ENST00000549688 BARGINQ6ZT62 677 aa9.37□□□□□ -0.91
CALCOCO1-215ENST00000549688 RTF1Q92541 710 aaKnown RBP9.37□□□□□ -0.91
CALCOCO1-215ENST00000549688 YTHDC1Q96MU7 727 aaKnown RBP9.37□□□□□ -0.91
CALCOCO1-215ENST00000549688 CCDC9Q9Y3X0 531 aaKnown RBP9.37□□□□□ -0.91
CALCOCO1-215ENST00000549688 DLG5Q8TDM6 1919 aa9.37□□□□□ -0.91
CALCOCO1-215ENST00000549688 CENPBP07199 599 aaPredicted RBP9.36□□□□□ -0.91
CALCOCO1-215ENST00000549688 RIPK4P57078 832 aa9.36□□□□□ -0.91
CALCOCO1-215ENST00000549688 AKAP4Q5JQC9 854 aa9.36□□□□□ -0.91
CALCOCO1-215ENST00000549688 WDR63Q8IWG1 891 aa9.36□□□□□ -0.91
CALCOCO1-215ENST00000549688 USHBP1Q8N6Y0 703 aa9.36□□□□□ -0.91
CALCOCO1-215ENST00000549688 MAP3K5Q99683 1374 aa9.36□□□□□ -0.91
CALCOCO1-215ENST00000549688 MEGF6O75095 1541 aa9.36□□□□□ -0.91
CALCOCO1-215ENST00000549688 IL16Q14005 1332 aa9.35□□□□□ -0.91
CALCOCO1-215ENST00000549688 GNAT3A8MTJ3 354 aa9.35□□□□□ -0.91
CALCOCO1-215ENST00000549688 ATRNO75882 1429 aa9.35□□□□□ -0.91
CALCOCO1-215ENST00000549688 IFNL2Q8IZJ0 200 aa9.35□□□□□ -0.91
CALCOCO1-215ENST00000549688 DISP2A7MBM2 1401 aa9.34□□□□□ -0.91
CALCOCO1-215ENST00000549688 TNS2Q63HR2 1409 aa9.34□□□□□ -0.91
CALCOCO1-215ENST00000549688 MTHFSDQ2M296 383 aaKnown RBP9.34□□□□□ -0.91
CALCOCO1-215ENST00000549688 ZNF530Q6P9A1 599 aaPredicted RBP9.34□□□□□ -0.91
CALCOCO1-215ENST00000549688 ZCRB1Q8TBF4 217 aaKnown RBP9.34□□□□□ -0.91
CALCOCO1-215ENST00000549688 PHACTR3Q96KR7 559 aa9.34□□□□□ -0.91
CALCOCO1-215ENST00000549688 USP35Q9P2H5 1018 aa9.34□□□□□ -0.91
CALCOCO1-215ENST00000549688 EXOC5O00471 708 aa9.33□□□□□ -0.92
CALCOCO1-215ENST00000549688 GOLGA2Q08379 1002 aa9.33□□□□□ -0.92
CALCOCO1-215ENST00000549688 NEUROD2Q15784 382 aa9.33□□□□□ -0.92
CALCOCO1-215ENST00000549688 DDB1Q16531 1140 aa9.33□□□□□ -0.92
CALCOCO1-215ENST00000549688 WWC1Q8IX03 1113 aa9.33□□□□□ -0.92
CALCOCO1-215ENST00000549688 GJD4Q96KN9 370 aaPredicted RBP9.33□□□□□ -0.92
CALCOCO1-215ENST00000549688 MYH16Q9H6N6 1097 aa9.33□□□□□ -0.92
CALCOCO1-215ENST00000549688 BABAM1Q9NWV8 329 aa9.33□□□□□ -0.92
CALCOCO1-215ENST00000549688 VIRMAQ69YN4 1812 aaKnown RBP9.33□□□□□ -0.92
CALCOCO1-215ENST00000549688 ADAMTS7Q9UKP4 1686 aa9.32□□□□□ -0.92
CALCOCO1-215ENST00000549688 THSD7AQ9UPZ6 1657 aa9.32□□□□□ -0.92
CALCOCO1-215ENST00000549688 LRRC37A3O60309 1634 aa9.32□□□□□ -0.92
CALCOCO1-215ENST00000549688 E9PSI1 815 aa9.32□□□□□ -0.92
CALCOCO1-215ENST00000549688 GNAI1P63096 354 aa9.32□□□□□ -0.92
CALCOCO1-215ENST00000549688 DCAF5Q96JK2 942 aa9.32□□□□□ -0.92
CALCOCO1-215ENST00000549688 SCN11AQ9UI33 1791 aa9.32□□□□□ -0.92
CALCOCO1-215ENST00000549688 ZNF521Q96K83 1311 aa9.31□□□□□ -0.92
CALCOCO1-215ENST00000549688 SHANK3Q9BYB0 1731 aa9.31□□□□□ -0.92
CALCOCO1-215ENST00000549688 PHKG2P15735 406 aa9.31□□□□□ -0.92
CALCOCO1-215ENST00000549688 CHMP4AQ9BY43 222 aa9.31□□□□□ -0.92
CALCOCO1-215ENST00000549688 QTRT2Q9H974 415 aaKnown RBP9.31□□□□□ -0.92
CALCOCO1-215ENST00000549688 RRP7AQ9Y3A4 280 aaKnown RBP9.31□□□□□ -0.92
CALCOCO1-215ENST00000549688 GLI3P10071 1580 aa9.31□□□□□ -0.92
CALCOCO1-215ENST00000549688 CEMIPQ8WUJ3 1361 aa9.3□□□□□ -0.92
CALCOCO1-215ENST00000549688 ONECUT3O60422 494 aaPredicted RBP9.3□□□□□ -0.92
CALCOCO1-215ENST00000549688 RBM6P78332 1123 aaKnown RBP9.3□□□□□ -0.92
CALCOCO1-215ENST00000549688 TEFQ10587 303 aa9.3□□□□□ -0.92
CALCOCO1-215ENST00000549688 NKX1-1Q15270 411 aaPredicted RBP9.3□□□□□ -0.92
CALCOCO1-215ENST00000549688 IFT57Q9NWB7 429 aa9.3□□□□□ -0.92
CALCOCO1-215ENST00000549688 TRIM35Q9UPQ4 493 aa9.3□□□□□ -0.92
CALCOCO1-215ENST00000549688 MRC1P22897 1456 aa9.29□□□□□ -0.92
CALCOCO1-215ENST00000549688 A0A0G2JS52 829 aa9.29□□□□□ -0.92
CALCOCO1-215ENST00000549688 ERVV-2B6SEH9 535 aa9.29□□□□□ -0.92
CALCOCO1-215ENST00000549688 CT47B1P0C2W7 299 aaPredicted RBP9.29□□□□□ -0.92
CALCOCO1-215ENST00000549688 MYT1Q01538 1121 aa9.29□□□□□ -0.92
CALCOCO1-215ENST00000549688 FAM98CQ17RN3 349 aaKnown RBP9.29□□□□□ -0.92
CALCOCO1-215ENST00000549688 CFAP44Q96MT7 982 aa9.29□□□□□ -0.92
CALCOCO1-215ENST00000549688 SALL2Q9Y467 1007 aaPredicted RBP9.29□□□□□ -0.92
CALCOCO1-215ENST00000549688 SOS1Q07889 1333 aaPredicted RBP9.29□□□□□ -0.92
CALCOCO1-215ENST00000549688 CYP27B1O15528 508 aa9.28□□□□□ -0.92
CALCOCO1-215ENST00000549688 BCL9O00512 1426 aa9.28□□□□□ -0.92
CALCOCO1-215ENST00000549688 SIPA1L3O60292 1781 aaPredicted RBP9.27□□□□□ -0.92
CALCOCO1-215ENST00000549688 RNMTO43148 476 aaKnown RBP9.27□□□□□ -0.93
CALCOCO1-215ENST00000549688 RXRBP28702 533 aa9.27□□□□□ -0.93
CALCOCO1-215ENST00000549688 SLFN5Q08AF3 891 aa9.27□□□□□ -0.93
CALCOCO1-215ENST00000549688 TAF7Q15545 349 aaPredicted RBP9.27□□□□□ -0.93
CALCOCO1-215ENST00000549688 MCM10Q7L590 875 aa9.27□□□□□ -0.93
CALCOCO1-215ENST00000549688 DDX54Q8TDD1 881 aaKnown RBP9.27□□□□□ -0.93
CALCOCO1-215ENST00000549688 ZNF428Q96B54 188 aa9.27□□□□□ -0.93
CALCOCO1-215ENST00000549688 KDM6AO15550 1401 aaPredicted RBP9.26□□□□□ -0.93
CALCOCO1-215ENST00000549688 HMGB2P26583 209 aaKnown RBP9.26□□□□□ -0.93
CALCOCO1-215ENST00000549688 CABP4P57796 275 aa9.26□□□□□ -0.93
CALCOCO1-215ENST00000549688 MPRIPQ6WCQ1 1025 aa9.26□□□□□ -0.93
CALCOCO1-215ENST00000549688 IL17REQ8NFR9 667 aa9.26□□□□□ -0.93
CALCOCO1-215ENST00000549688 SLC52A2Q9HAB3 445 aa9.26□□□□□ -0.93
CALCOCO1-215ENST00000549688 KDM3BQ7LBC6 1761 aa9.26□□□□□ -0.93
CALCOCO1-215ENST00000549688 CHL1O00533 1208 aa9.25□□□□□ -0.93
CALCOCO1-215ENST00000549688 ZNF853P0CG23 659 aa9.25□□□□□ -0.93
CALCOCO1-215ENST00000549688 ILDR1Q86SU0 546 aaPredicted RBP9.25□□□□□ -0.93
CALCOCO1-215ENST00000549688 TRMT2AQ8IZ69 625 aaKnown RBP9.25□□□□□ -0.93
CALCOCO1-215ENST00000549688 TMOD3Q9NYL9 352 aa9.25□□□□□ -0.93
CALCOCO1-215ENST00000549688 TSPYL4Q9UJ04 414 aa9.25□□□□□ -0.93
CALCOCO1-215ENST00000549688 DOT1LQ8TEK3 1739 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms