RNA–Protein interactions for RNA: ENST00000549347.1

RAPGEF3-220, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene RAPGEF3, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-220ENST00000549347 DIAPH1O60610 1272 aaKnown RBP23.84■■□□□ 1.41
RAPGEF3-220ENST00000549347 TATP17735 454 aaPredicted RBP23.83■■□□□ 1.41
RAPGEF3-220ENST00000549347 FAM196AQ6ZSG2 479 aa23.83■■□□□ 1.41
RAPGEF3-220ENST00000549347 MARCH10Q8NA82 808 aaPredicted RBP23.83■■□□□ 1.41
RAPGEF3-220ENST00000549347 CFAP53Q96M91 514 aa23.83■■□□□ 1.41
RAPGEF3-220ENST00000549347 NHSQ6T4R5 1651 aa23.82■■□□□ 1.4
RAPGEF3-220ENST00000549347 MYBBP1AQ9BQG0 1328 aaKnown RBP23.81■■□□□ 1.4
RAPGEF3-220ENST00000549347 ZCRB1Q8TBF4 217 aaKnown RBP23.8■■□□□ 1.4
RAPGEF3-220ENST00000549347 DOT1LQ8TEK3 1739 aa23.79■■□□□ 1.4
RAPGEF3-220ENST00000549347 PRKRIP1Q9H875 184 aaPredicted RBP23.79■■□□□ 1.4
RAPGEF3-220ENST00000549347 CCDC125Q86Z20 511 aa23.78■■□□□ 1.4
RAPGEF3-220ENST00000549347 AEBP1Q8IUX7 1158 aa23.78■■□□□ 1.4
RAPGEF3-220ENST00000549347 PCDH11XQ9BZA7 1347 aa23.78■■□□□ 1.4
RAPGEF3-220ENST00000549347 PCDH11YQ9BZA8 1340 aa23.78■■□□□ 1.4
RAPGEF3-220ENST00000549347 SULT6B1Q6IMI4 303 aa23.77■■□□□ 1.4
RAPGEF3-220ENST00000549347 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.77■■□□□ 1.4
RAPGEF3-220ENST00000549347 TOGARAM1Q9Y4F4 1720 aa23.74■■□□□ 1.39
RAPGEF3-220ENST00000549347 RGPD3A6NKT7 1758 aaPredicted RBP23.74■■□□□ 1.39
RAPGEF3-220ENST00000549347 RGPD4Q7Z3J3 1758 aa23.74■■□□□ 1.39
RAPGEF3-220ENST00000549347 DDX54Q8TDD1 881 aaKnown RBP23.74■■□□□ 1.39
RAPGEF3-220ENST00000549347 SPG7Q9UQ90 795 aa23.73■■□□□ 1.39
RAPGEF3-220ENST00000549347 NUDCQ9Y266 331 aa23.72■■□□□ 1.39
RAPGEF3-220ENST00000549347 U2SURPO15042 1029 aaKnown RBP23.71■■□□□ 1.39
RAPGEF3-220ENST00000549347 CYP27B1O15528 508 aa23.71■■□□□ 1.39
RAPGEF3-220ENST00000549347 TRIM37O94972 964 aa23.71■■□□□ 1.39
RAPGEF3-220ENST00000549347 HMOX1P09601 288 aa23.71■■□□□ 1.39
RAPGEF3-220ENST00000549347 BTAF1O14981 1849 aa23.7■■□□□ 1.38
RAPGEF3-220ENST00000549347 SF3B2Q13435 895 aaKnown RBP23.69■■□□□ 1.38
RAPGEF3-220ENST00000549347 AMOTQ4VCS5 1084 aa23.68■■□□□ 1.38
RAPGEF3-220ENST00000549347 PLEKHO1Q53GL0 409 aaPredicted RBP23.68■■□□□ 1.38
RAPGEF3-220ENST00000549347 BCL11BQ9C0K0 894 aaPredicted RBP23.67■■□□□ 1.38
RAPGEF3-220ENST00000549347 ITGB4P16144 1822 aa23.67■■□□□ 1.38
RAPGEF3-220ENST00000549347 RREB1Q92766 1687 aa23.67■■□□□ 1.38
RAPGEF3-220ENST00000549347 PHKG2P15735 406 aa23.66■■□□□ 1.38
RAPGEF3-220ENST00000549347 NKX1-1Q15270 411 aaPredicted RBP23.66■■□□□ 1.38
RAPGEF3-220ENST00000549347 VIRMAQ69YN4 1812 aaKnown RBP23.66■■□□□ 1.38
RAPGEF3-220ENST00000549347 U2AF1L5P0DN76 240 aaPredicted RBP23.65■■□□□ 1.38
RAPGEF3-220ENST00000549347 U2AF1Q01081 240 aaKnown RBP eCLIP23.65■■□□□ 1.38
RAPGEF3-220ENST00000549347 IFNL2Q8IZJ0 200 aa23.65■■□□□ 1.38
RAPGEF3-220ENST00000549347 RSPH6AQ9H0K4 717 aa23.65■■□□□ 1.38
RAPGEF3-220ENST00000549347 ADAMTS7Q9UKP4 1686 aa23.64■■□□□ 1.38
RAPGEF3-220ENST00000549347 BAG6P46379 1132 aa23.64■■□□□ 1.37
RAPGEF3-220ENST00000549347 SCN11AQ9UI33 1791 aa23.64■■□□□ 1.37
RAPGEF3-220ENST00000549347 ANP32CO43423 234 aa23.63■■□□□ 1.37
RAPGEF3-220ENST00000549347 ZNF530Q6P9A1 599 aaPredicted RBP23.63■■□□□ 1.37
RAPGEF3-220ENST00000549347 PTF1AQ7RTS3 328 aa23.63■■□□□ 1.37
RAPGEF3-220ENST00000549347 ACSBG1Q96GR2 724 aa23.63■■□□□ 1.37
RAPGEF3-220ENST00000549347 KCNQ2O43526 872 aa23.62■■□□□ 1.37
RAPGEF3-220ENST00000549347 DEFB132Q7Z7B7 95 aa23.62■■□□□ 1.37
RAPGEF3-220ENST00000549347 KDM6AO15550 1401 aaPredicted RBP23.61■■□□□ 1.37
RAPGEF3-220ENST00000549347 FCHSD2O94868 740 aa23.61■■□□□ 1.37
RAPGEF3-220ENST00000549347 APBA3O96018 575 aa23.61■■□□□ 1.37
RAPGEF3-220ENST00000549347 PRKAR2BP31323 418 aa23.61■■□□□ 1.37
RAPGEF3-220ENST00000549347 KAT6BQ8WYB5 2073 aa23.6■■□□□ 1.37
RAPGEF3-220ENST00000549347 NUP188Q5SRE5 1749 aa23.6■■□□□ 1.37
RAPGEF3-220ENST00000549347 HSP90AB1P08238 724 aaKnown RBP23.59■■□□□ 1.37
RAPGEF3-220ENST00000549347 C1orf141Q5JVX7 400 aa23.59■■□□□ 1.37
RAPGEF3-220ENST00000549347 LY75O60449 1722 aa23.59■■□□□ 1.37
RAPGEF3-220ENST00000549347 PRIM1P49642 420 aaKnown RBP23.58■■□□□ 1.37
RAPGEF3-220ENST00000549347 MTHFSDQ2M296 383 aaKnown RBP23.58■■□□□ 1.37
RAPGEF3-220ENST00000549347 MRC1P22897 1456 aa23.57■■□□□ 1.36
RAPGEF3-220ENST00000549347 PLSCR1O15162 318 aa23.57■■□□□ 1.36
RAPGEF3-220ENST00000549347 EN1Q05925 392 aaPredicted RBP23.57■■□□□ 1.36
RAPGEF3-220ENST00000549347 AKAP4Q5JQC9 854 aa23.57■■□□□ 1.36
RAPGEF3-220ENST00000549347 DCAF5Q96JK2 942 aa23.57■■□□□ 1.36
RAPGEF3-220ENST00000549347 GAS2L2Q8NHY3 880 aa23.56■■□□□ 1.36
RAPGEF3-220ENST00000549347 CAMKK2Q96RR4 588 aa23.56■■□□□ 1.36
RAPGEF3-220ENST00000549347 SYTL4Q96C24 671 aaPredicted RBP23.55■■□□□ 1.36
RAPGEF3-220ENST00000549347 PHACTR3Q96KR7 559 aa23.54■■□□□ 1.36
RAPGEF3-220ENST00000549347 PLEKHF1Q96S99 279 aa23.54■■□□□ 1.36
RAPGEF3-220ENST00000549347 DLG5Q8TDM6 1919 aa23.54■■□□□ 1.36
RAPGEF3-220ENST00000549347 MAP3K5Q99683 1374 aa23.53■■□□□ 1.36
RAPGEF3-220ENST00000549347 EZH2Q15910 746 aaKnown RBP23.53■■□□□ 1.36
RAPGEF3-220ENST00000549347 SIPA1L3O60292 1781 aaPredicted RBP23.51■■□□□ 1.35
RAPGEF3-220ENST00000549347 ERVV-2B6SEH9 535 aa23.51■■□□□ 1.35
RAPGEF3-220ENST00000549347 WDR43Q15061 677 aaKnown RBP eCLIP23.51■■□□□ 1.35
RAPGEF3-220ENST00000549347 PNNQ9H307 717 aaKnown RBP23.51■■□□□ 1.35
RAPGEF3-220ENST00000549347 PAPPAQ13219 1627 aa23.51■■□□□ 1.35
RAPGEF3-220ENST00000549347 CCDC184Q52MB2 194 aa23.5■■□□□ 1.35
RAPGEF3-220ENST00000549347 MPRIPQ6WCQ1 1025 aa23.5■■□□□ 1.35
RAPGEF3-220ENST00000549347 TMOD3Q9NYL9 352 aa23.49■■□□□ 1.35
RAPGEF3-220ENST00000549347 NEFMP07197 916 aa23.48■■□□□ 1.35
RAPGEF3-220ENST00000549347 PIGBQ92521 554 aa23.48■■□□□ 1.35
RAPGEF3-220ENST00000549347 GNAT3A8MTJ3 354 aa23.47■■□□□ 1.35
RAPGEF3-220ENST00000549347 RNMTO43148 476 aaKnown RBP23.47■■□□□ 1.35
RAPGEF3-220ENST00000549347 MAPK8IP3Q9UPT6 1336 aa23.47■■□□□ 1.35
RAPGEF3-220ENST00000549347 ZNF831Q5JPB2 1677 aa23.46■■□□□ 1.35
RAPGEF3-220ENST00000549347 CEMIPQ8WUJ3 1361 aa23.46■■□□□ 1.35
RAPGEF3-220ENST00000549347 PALLDQ8WX93 1383 aa23.45■■□□□ 1.34
RAPGEF3-220ENST00000549347 TXNRD1Q16881 649 aa23.45■■□□□ 1.34
RAPGEF3-220ENST00000549347 PROM2Q8N271 834 aa23.45■■□□□ 1.34
RAPGEF3-220ENST00000549347 MRS2Q9HD23 443 aa23.45■■□□□ 1.34
RAPGEF3-220ENST00000549347 ADAMTS8Q9UP79 889 aa23.45■■□□□ 1.34
RAPGEF3-220ENST00000549347 CABP4P57796 275 aa23.44■■□□□ 1.34
RAPGEF3-220ENST00000549347 LGR6Q9HBX8 967 aa23.44■■□□□ 1.34
RAPGEF3-220ENST00000549347 TAF1LQ8IZX4 1826 aa23.44■■□□□ 1.34
RAPGEF3-220ENST00000549347 C5P01031 1676 aa23.44■■□□□ 1.34
RAPGEF3-220ENST00000549347 CICQ96RK0 1608 aaPredicted RBP23.44■■□□□ 1.34
RAPGEF3-220ENST00000549347 SMARCC1Q92922 1105 aaPredicted RBP23.43■■□□□ 1.34
RAPGEF3-220ENST00000549347 SLC52A2Q9HAB3 445 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms