RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 USP31Q70CQ4 1352 aa19.34■□□□□ 0.69
CCDC59-202ENST00000547758 FAM208AQ9UK61 1670 aaKnown RBP19.34■□□□□ 0.69
CCDC59-202ENST00000547758 POLD1P28340 1107 aa19.34■□□□□ 0.69
CCDC59-202ENST00000547758 AKT1S1Q96B36 256 aa19.34■□□□□ 0.69
CCDC59-202ENST00000547758 DOT1LQ8TEK3 1739 aa19.33■□□□□ 0.68
CCDC59-202ENST00000547758 SLC27A3Q5K4L6 730 aa19.32■□□□□ 0.68
CCDC59-202ENST00000547758 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.32■□□□□ 0.68
CCDC59-202ENST00000547758 PELP1Q8IZL8 1130 aaKnown RBP19.32■□□□□ 0.68
CCDC59-202ENST00000547758 PNPLA7Q6ZV29 1317 aa19.31■□□□□ 0.68
CCDC59-202ENST00000547758 IFFO2Q5TF58 517 aa19.31■□□□□ 0.68
CCDC59-202ENST00000547758 ANKRD24Q8TF21 1146 aa19.31■□□□□ 0.68
CCDC59-202ENST00000547758 L3MBTL2Q969R5 705 aa19.31■□□□□ 0.68
CCDC59-202ENST00000547758 ROCK2O75116 1388 aaKnown RBP19.31■□□□□ 0.68
CCDC59-202ENST00000547758 NME9Q86XW9 330 aa19.29■□□□□ 0.68
CCDC59-202ENST00000547758 RBM42Q9BTD8 480 aaKnown RBP19.29■□□□□ 0.68
CCDC59-202ENST00000547758 CD163L1Q9NR16 1453 aa19.28■□□□□ 0.68
CCDC59-202ENST00000547758 NLGN2Q8NFZ4 835 aa19.28■□□□□ 0.68
CCDC59-202ENST00000547758 SBNO2Q9Y2G9 1366 aa19.28■□□□□ 0.68
CCDC59-202ENST00000547758 TFCP2L1Q9NZI6 479 aa19.27■□□□□ 0.68
CCDC59-202ENST00000547758 RGPD2P0DJD1 1756 aa19.27■□□□□ 0.67
CCDC59-202ENST00000547758 DDX54Q8TDD1 881 aaKnown RBP19.26■□□□□ 0.67
CCDC59-202ENST00000547758 KCNQ4P56696 695 aa19.24■□□□□ 0.67
CCDC59-202ENST00000547758 EDC4Q6P2E9 1401 aaKnown RBP19.24■□□□□ 0.67
CCDC59-202ENST00000547758 ANKRD36BQ8N2N9 1353 aa19.23■□□□□ 0.67
CCDC59-202ENST00000547758 GRIN3BO60391 1043 aa19.23■□□□□ 0.67
CCDC59-202ENST00000547758 YBX3P16989 372 aaKnown RBP eCLIP19.23■□□□□ 0.67
CCDC59-202ENST00000547758 SYTL4Q96C24 671 aaPredicted RBP19.23■□□□□ 0.67
CCDC59-202ENST00000547758 NSD2O96028 1365 aa19.22■□□□□ 0.67
CCDC59-202ENST00000547758 C5P01031 1676 aa19.21■□□□□ 0.67
CCDC59-202ENST00000547758 PRIM1P49642 420 aaKnown RBP19.21■□□□□ 0.67
CCDC59-202ENST00000547758 HDGFL2Q7Z4V5 671 aaPredicted RBP19.21■□□□□ 0.67
CCDC59-202ENST00000547758 TMC1Q8TDI8 760 aa19.2■□□□□ 0.66
CCDC59-202ENST00000547758 IP6K1Q92551 441 aa19.2■□□□□ 0.66
CCDC59-202ENST00000547758 TAF1LQ8IZX4 1826 aa19.2■□□□□ 0.66
CCDC59-202ENST00000547758 ATP10DQ9P241 1426 aa19.19■□□□□ 0.66
CCDC59-202ENST00000547758 LTV1Q96GA3 475 aaPredicted RBP19.19■□□□□ 0.66
CCDC59-202ENST00000547758 CCNL1Q9UK58 526 aaPredicted RBP19.18■□□□□ 0.66
CCDC59-202ENST00000547758 A0A1W2PP64 1363 aa19.18■□□□□ 0.66
CCDC59-202ENST00000547758 SLC12A5Q9H2X9 1139 aa19.17■□□□□ 0.66
CCDC59-202ENST00000547758 MEGF6O75095 1541 aa19.16■□□□□ 0.66
CCDC59-202ENST00000547758 COL23A1Q86Y22 540 aaPredicted RBP19.16■□□□□ 0.66
CCDC59-202ENST00000547758 SIN3AQ96ST3 1273 aa19.16■□□□□ 0.66
CCDC59-202ENST00000547758 TERF2IPQ9NYB0 399 aa19.15■□□□□ 0.66
CCDC59-202ENST00000547758 USP47Q96K76 1375 aa19.15■□□□□ 0.66
CCDC59-202ENST00000547758 MSL1Q68DK7 614 aa19.14■□□□□ 0.65
CCDC59-202ENST00000547758 ZCRB1Q8TBF4 217 aaKnown RBP19.14■□□□□ 0.65
CCDC59-202ENST00000547758 ADCY9O60503 1353 aa19.12■□□□□ 0.65
CCDC59-202ENST00000547758 MAP3K19Q56UN5 1328 aa19.12■□□□□ 0.65
CCDC59-202ENST00000547758 HOXC9P31274 260 aa19.12■□□□□ 0.65
CCDC59-202ENST00000547758 NEUROD1Q13562 356 aa19.12■□□□□ 0.65
CCDC59-202ENST00000547758 GPBP1L1Q9HC44 474 aaPredicted RBP19.12■□□□□ 0.65
CCDC59-202ENST00000547758 CARD11Q9BXL7 1154 aa19.11■□□□□ 0.65
CCDC59-202ENST00000547758 CD2APQ9Y5K6 639 aa19.11■□□□□ 0.65
CCDC59-202ENST00000547758 ITGB4P16144 1822 aa19.11■□□□□ 0.65
CCDC59-202ENST00000547758 ZBTB22O15209 634 aa19.1■□□□□ 0.65
CCDC59-202ENST00000547758 AMPHP49418 695 aa19.1■□□□□ 0.65
CCDC59-202ENST00000547758 UBR3Q6ZT12 1888 aa19.09■□□□□ 0.65
CCDC59-202ENST00000547758 TOGARAM1Q9Y4F4 1720 aa19.09■□□□□ 0.65
CCDC59-202ENST00000547758 HSPA6P17066 643 aa19.09■□□□□ 0.65
CCDC59-202ENST00000547758 COG3Q96JB2 828 aa19.09■□□□□ 0.65
CCDC59-202ENST00000547758 C4BP0C0L5 1744 aa19.08■□□□□ 0.65
CCDC59-202ENST00000547758 RTL1A6NKG5 1358 aa19.07■□□□□ 0.64
CCDC59-202ENST00000547758 CGNL1Q0VF96 1302 aa19.07■□□□□ 0.64
CCDC59-202ENST00000547758 FLAD1Q8NFF5 587 aa19.07■□□□□ 0.64
CCDC59-202ENST00000547758 PUS7Q96PZ0 661 aaKnown RBP19.07■□□□□ 0.64
CCDC59-202ENST00000547758 FBLN1P23142 703 aa19.06■□□□□ 0.64
CCDC59-202ENST00000547758 ZNF526Q8TF50 670 aaPredicted RBP19.06■□□□□ 0.64
CCDC59-202ENST00000547758 HMGB2P26583 209 aaKnown RBP19.05■□□□□ 0.64
CCDC59-202ENST00000547758 PALLDQ8WX93 1383 aa19.05■□□□□ 0.64
CCDC59-202ENST00000547758 NBPF6Q5VWK0 638 aa19.04■□□□□ 0.64
CCDC59-202ENST00000547758 NBPF4Q96M43 638 aa19.04■□□□□ 0.64
CCDC59-202ENST00000547758 SMG6Q86US8 1419 aaKnown RBP19.03■□□□□ 0.64
CCDC59-202ENST00000547758 USHBP1Q8N6Y0 703 aa19.03■□□□□ 0.64
CCDC59-202ENST00000547758 RAPGEF4Q8WZA2 1011 aa19.03■□□□□ 0.64
CCDC59-202ENST00000547758 PKD1L3Q7Z443 1732 aa19.02■□□□□ 0.63
CCDC59-202ENST00000547758 MAP2P11137 1827 aaKnown RBP19.02■□□□□ 0.63
CCDC59-202ENST00000547758 IGSF1Q8N6C5 1336 aa19.01■□□□□ 0.63
CCDC59-202ENST00000547758 PCDH11XQ9BZA7 1347 aa19.01■□□□□ 0.63
CCDC59-202ENST00000547758 PCDH11YQ9BZA8 1340 aa19.01■□□□□ 0.63
CCDC59-202ENST00000547758 TATP17735 454 aaPredicted RBP19.01■□□□□ 0.63
CCDC59-202ENST00000547758 RRS1Q15050 365 aaKnown RBP19.01■□□□□ 0.63
CCDC59-202ENST00000547758 KIF20BQ96Q89 1820 aa19.01■□□□□ 0.63
CCDC59-202ENST00000547758 CICQ96RK0 1608 aaPredicted RBP19■□□□□ 0.63
CCDC59-202ENST00000547758 MPRIPQ6WCQ1 1025 aa19■□□□□ 0.63
CCDC59-202ENST00000547758 AK7Q96M32 723 aa19■□□□□ 0.63
CCDC59-202ENST00000547758 NSD3Q9BZ95 1437 aa19■□□□□ 0.63
CCDC59-202ENST00000547758 WWC3Q9ULE0 1092 aa18.99■□□□□ 0.63
CCDC59-202ENST00000547758 KIF13BQ9NQT8 1826 aa18.99■□□□□ 0.63
CCDC59-202ENST00000547758 AMIGO3Q86WK7 504 aa18.98■□□□□ 0.63
CCDC59-202ENST00000547758 ZBTB12Q9Y330 459 aaPredicted RBP18.98■□□□□ 0.63
CCDC59-202ENST00000547758 PHF14O94880 888 aa18.97■□□□□ 0.63
CCDC59-202ENST00000547758 SMARCC1Q92922 1105 aaPredicted RBP18.97■□□□□ 0.63
CCDC59-202ENST00000547758 KIF3CO14782 793 aa18.96■□□□□ 0.63
CCDC59-202ENST00000547758 TESK2Q96S53 571 aa18.96■□□□□ 0.63
CCDC59-202ENST00000547758 KIAA1551Q9HCM1 1747 aa18.96■□□□□ 0.63
CCDC59-202ENST00000547758 N4BP2Q86UW6 1770 aaPredicted RBP18.96■□□□□ 0.63
CCDC59-202ENST00000547758 INSRP06213 1382 aa18.95■□□□□ 0.62
CCDC59-202ENST00000547758 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.95■□□□□ 0.62
CCDC59-202ENST00000547758 CYP27B1O15528 508 aa18.95■□□□□ 0.62
CCDC59-202ENST00000547758 CHRDL2Q6WN34 429 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms