RNA–Protein interactions for RNA: ENST00000547701.5

CTDSP2-203, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 988 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-203ENST00000547701 EIF4A2Q14240 407 aaKnown RBP31.71■■■□□ 2.67
CTDSP2-203ENST00000547701 EYA1Q99502 592 aa31.71■■■□□ 2.67
CTDSP2-203ENST00000547701 RREB1Q92766 1687 aa31.7■■■□□ 2.66
CTDSP2-203ENST00000547701 TATP17735 454 aaPredicted RBP31.69■■■□□ 2.66
CTDSP2-203ENST00000547701 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.68■■■□□ 2.66
CTDSP2-203ENST00000547701 PKD1L3Q7Z443 1732 aa31.67■■■□□ 2.66
CTDSP2-203ENST00000547701 USHBP1Q8N6Y0 703 aa31.67■■■□□ 2.66
CTDSP2-203ENST00000547701 IGSF1Q8N6C5 1336 aa31.67■■■□□ 2.66
CTDSP2-203ENST00000547701 ZEB1P37275 1124 aaPredicted RBP31.66■■■□□ 2.66
CTDSP2-203ENST00000547701 EZH2Q15910 746 aaKnown RBP31.65■■■□□ 2.66
CTDSP2-203ENST00000547701 KAT6BQ8WYB5 2073 aa31.64■■■□□ 2.66
CTDSP2-203ENST00000547701 CC2D1BQ5T0F9 858 aaKnown RBP31.62■■■□□ 2.65
CTDSP2-203ENST00000547701 PCDH11XQ9BZA7 1347 aa31.61■■■□□ 2.65
CTDSP2-203ENST00000547701 PCDH11YQ9BZA8 1340 aa31.61■■■□□ 2.65
CTDSP2-203ENST00000547701 PTF1AQ7RTS3 328 aa31.61■■■□□ 2.65
CTDSP2-203ENST00000547701 DDX54Q8TDD1 881 aaKnown RBP31.61■■■□□ 2.65
CTDSP2-203ENST00000547701 MTHFSP49914 203 aa31.6■■■□□ 2.65
CTDSP2-203ENST00000547701 NUP188Q5SRE5 1749 aa31.59■■■□□ 2.65
CTDSP2-203ENST00000547701 IL13P35225 146 aa31.59■■■□□ 2.65
CTDSP2-203ENST00000547701 KDRP35968 1356 aa31.58■■■□□ 2.65
CTDSP2-203ENST00000547701 KCNQ2O43526 872 aa31.58■■■□□ 2.65
CTDSP2-203ENST00000547701 BTAF1O14981 1849 aa31.56■■■□□ 2.64
CTDSP2-203ENST00000547701 NKX1-1Q15270 411 aaPredicted RBP31.56■■■□□ 2.64
CTDSP2-203ENST00000547701 SPG7Q9UQ90 795 aa31.56■■■□□ 2.64
CTDSP2-203ENST00000547701 CYP27B1O15528 508 aa31.54■■■□□ 2.64
CTDSP2-203ENST00000547701 PROM2Q8N271 834 aa31.53■■■□□ 2.64
CTDSP2-203ENST00000547701 DOT1LQ8TEK3 1739 aa31.52■■■□□ 2.64
CTDSP2-203ENST00000547701 ACSBG1Q96GR2 724 aa31.52■■■□□ 2.64
CTDSP2-203ENST00000547701 COL3A1P02461 1466 aaPredicted RBP31.49■■■□□ 2.63
CTDSP2-203ENST00000547701 PRIM1P49642 420 aaKnown RBP31.47■■■□□ 2.63
CTDSP2-203ENST00000547701 TXNRD1Q16881 649 aa31.47■■■□□ 2.63
CTDSP2-203ENST00000547701 AMOTQ4VCS5 1084 aa31.47■■■□□ 2.63
CTDSP2-203ENST00000547701 DIAPH1O60610 1272 aaKnown RBP31.46■■■□□ 2.63
CTDSP2-203ENST00000547701 NBPF14Q5TI25 921 aa31.46■■■□□ 2.63
CTDSP2-203ENST00000547701 IFNL2Q8IZJ0 200 aa31.46■■■□□ 2.63
CTDSP2-203ENST00000547701 LY75O60449 1722 aa31.44■■■□□ 2.62
CTDSP2-203ENST00000547701 ITGB4P16144 1822 aa31.43■■■□□ 2.62
CTDSP2-203ENST00000547701 PHKG2P15735 406 aa31.43■■■□□ 2.62
CTDSP2-203ENST00000547701 PLEKHO1Q53GL0 409 aaPredicted RBP31.43■■■□□ 2.62
CTDSP2-203ENST00000547701 SULT6B1Q6IMI4 303 aa31.43■■■□□ 2.62
CTDSP2-203ENST00000547701 TOGARAM1Q9Y4F4 1720 aa31.42■■■□□ 2.62
CTDSP2-203ENST00000547701 SRCAPQ6ZRS2 3230 aa31.41■■■□□ 2.62
CTDSP2-203ENST00000547701 SLC27A3Q5K4L6 730 aa31.41■■■□□ 2.62
CTDSP2-203ENST00000547701 AEBP1Q8IUX7 1158 aa31.41■■■□□ 2.62
CTDSP2-203ENST00000547701 PPP2R1AP30153 589 aa31.4■■■□□ 2.62
CTDSP2-203ENST00000547701 HSP90AB1P08238 724 aaKnown RBP31.38■■■□□ 2.61
CTDSP2-203ENST00000547701 PAPPAQ13219 1627 aa31.38■■■□□ 2.61
CTDSP2-203ENST00000547701 R3HDM1Q15032 1099 aaKnown RBP31.37■■■□□ 2.61
CTDSP2-203ENST00000547701 HMGB2P26583 209 aaKnown RBP31.36■■■□□ 2.61
CTDSP2-203ENST00000547701 SYTL4Q96C24 671 aaPredicted RBP31.36■■■□□ 2.61
CTDSP2-203ENST00000547701 CFAP53Q96M91 514 aa31.35■■■□□ 2.61
CTDSP2-203ENST00000547701 DCAF5Q96JK2 942 aa31.34■■■□□ 2.61
CTDSP2-203ENST00000547701 LRP5O75197 1615 aa31.34■■■□□ 2.61
CTDSP2-203ENST00000547701 PSDA5PKW4 1024 aaPredicted RBP31.33■■■□□ 2.61
CTDSP2-203ENST00000547701 ERVV-2B6SEH9 535 aa31.33■■■□□ 2.61
CTDSP2-203ENST00000547701 ANO8Q9HCE9 1232 aaPredicted RBP31.32■■■□□ 2.6
CTDSP2-203ENST00000547701 LRRC4BQ9NT99 713 aa31.32■■■□□ 2.6
CTDSP2-203ENST00000547701 SLC15A2Q16348 729 aa31.3■■■□□ 2.6
CTDSP2-203ENST00000547701 ZNF530Q6P9A1 599 aaPredicted RBP31.3■■■□□ 2.6
CTDSP2-203ENST00000547701 SMARCC1Q92922 1105 aaPredicted RBP31.3■■■□□ 2.6
CTDSP2-203ENST00000547701 DDX10Q13206 875 aaKnown RBP31.29■■■□□ 2.6
CTDSP2-203ENST00000547701 RALBP1Q15311 655 aa31.29■■■□□ 2.6
CTDSP2-203ENST00000547701 PIGBQ92521 554 aa31.29■■■□□ 2.6
CTDSP2-203ENST00000547701 MPRIPQ6WCQ1 1025 aa31.28■■■□□ 2.6
CTDSP2-203ENST00000547701 CNGB1Q14028 1251 aaPredicted RBP31.27■■■□□ 2.6
CTDSP2-203ENST00000547701 NUDCQ9Y266 331 aa31.27■■■□□ 2.6
CTDSP2-203ENST00000547701 QSER1Q2KHR3 1735 aa31.27■■■□□ 2.6
CTDSP2-203ENST00000547701 KDM6AO15550 1401 aaPredicted RBP31.26■■■□□ 2.6
CTDSP2-203ENST00000547701 HMOX1P09601 288 aa31.26■■■□□ 2.59
CTDSP2-203ENST00000547701 AKAP4Q5JQC9 854 aa31.26■■■□□ 2.59
CTDSP2-203ENST00000547701 C1orf141Q5JVX7 400 aa31.26■■■□□ 2.59
CTDSP2-203ENST00000547701 STK32BQ9NY57 414 aa31.26■■■□□ 2.59
CTDSP2-203ENST00000547701 CASZ1Q86V15 1759 aa31.25■■■□□ 2.59
CTDSP2-203ENST00000547701 SCN11AQ9UI33 1791 aa31.25■■■□□ 2.59
CTDSP2-203ENST00000547701 TMOD3Q9NYL9 352 aa31.25■■■□□ 2.59
CTDSP2-203ENST00000547701 AKT1S1Q96B36 256 aa31.24■■■□□ 2.59
CTDSP2-203ENST00000547701 ADAMTS7Q9UKP4 1686 aa31.24■■■□□ 2.59
CTDSP2-203ENST00000547701 PALLDQ8WX93 1383 aa31.23■■■□□ 2.59
CTDSP2-203ENST00000547701 ZNF831Q5JPB2 1677 aa31.22■■■□□ 2.59
CTDSP2-203ENST00000547701 TAF1LQ8IZX4 1826 aa31.21■■■□□ 2.59
CTDSP2-203ENST00000547701 U2SURPO15042 1029 aaKnown RBP31.21■■■□□ 2.59
CTDSP2-203ENST00000547701 CCNL1Q9UK58 526 aaPredicted RBP31.21■■■□□ 2.59
CTDSP2-203ENST00000547701 FCHSD2O94868 740 aa31.2■■■□□ 2.59
CTDSP2-203ENST00000547701 MTHFSDQ2M296 383 aaKnown RBP31.19■■■□□ 2.58
CTDSP2-203ENST00000547701 RSPH6AQ9H0K4 717 aa31.19■■■□□ 2.58
CTDSP2-203ENST00000547701 VIRMAQ69YN4 1812 aaKnown RBP31.18■■■□□ 2.58
CTDSP2-203ENST00000547701 C5P01031 1676 aa31.16■■■□□ 2.58
CTDSP2-203ENST00000547701 MRC1P22897 1456 aa31.16■■■□□ 2.58
CTDSP2-203ENST00000547701 ZNF827Q17R98 1081 aa31.16■■■□□ 2.58
CTDSP2-203ENST00000547701 GAS2L2Q8NHY3 880 aa31.16■■■□□ 2.58
CTDSP2-203ENST00000547701 ATG3Q9NT62 314 aa31.16■■■□□ 2.58
CTDSP2-203ENST00000547701 ASAP1Q9ULH1 1129 aa31.15■■■□□ 2.58
CTDSP2-203ENST00000547701 CABP4P57796 275 aa31.14■■■□□ 2.58
CTDSP2-203ENST00000547701 LOC102724428A0A0B4J2F2 783 aa31.13■■■□□ 2.57
CTDSP2-203ENST00000547701 SIK1P57059 783 aa31.13■■■□□ 2.57
CTDSP2-203ENST00000547701 RNMTO43148 476 aaKnown RBP31.11■■■□□ 2.57
CTDSP2-203ENST00000547701 U2AF1L5P0DN76 240 aaPredicted RBP31.11■■■□□ 2.57
CTDSP2-203ENST00000547701 U2AF1Q01081 240 aaKnown RBP eCLIP31.11■■■□□ 2.57
CTDSP2-203ENST00000547701 SLC16A10Q8TF71 515 aa31.11■■■□□ 2.57
CTDSP2-203ENST00000547701 MYBBP1AQ9BQG0 1328 aaKnown RBP31.11■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms