RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 USP54Q70EL1 1684 aa19.49■□□□□ 0.71
BRF1-212ENST00000547562 RGS12O14924 1447 aa19.49■□□□□ 0.71
BRF1-212ENST00000547562 INTS3Q68E01 1043 aaKnown RBP19.49■□□□□ 0.71
BRF1-212ENST00000547562 TBC1D2Q9BYX2 928 aa19.49■□□□□ 0.71
BRF1-212ENST00000547562 IGSF1Q8N6C5 1336 aa19.48■□□□□ 0.71
BRF1-212ENST00000547562 MTHFSDQ2M296 383 aaKnown RBP19.47■□□□□ 0.71
BRF1-212ENST00000547562 BMP2KLQ5H9B9 411 aa19.47■□□□□ 0.71
BRF1-212ENST00000547562 FRAT2O75474 233 aaPredicted RBP19.47■□□□□ 0.71
BRF1-212ENST00000547562 NLRP6P59044 892 aa19.46■□□□□ 0.71
BRF1-212ENST00000547562 EYA1Q99502 592 aa19.46■□□□□ 0.71
BRF1-212ENST00000547562 FOXO3O43524 673 aa19.46■□□□□ 0.71
BRF1-212ENST00000547562 RTF1Q92541 710 aaKnown RBP19.45■□□□□ 0.7
BRF1-212ENST00000547562 PTPRCP08575 1304 aa19.45■□□□□ 0.7
BRF1-212ENST00000547562 SLKQ9H2G2 1235 aaPredicted RBP19.45■□□□□ 0.7
BRF1-212ENST00000547562 ANTXR1Q9H6X2 564 aa19.45■□□□□ 0.7
BRF1-212ENST00000547562 CHD2O14647 1828 aaKnown RBP19.44■□□□□ 0.7
BRF1-212ENST00000547562 GAS2L2Q8NHY3 880 aa19.44■□□□□ 0.7
BRF1-212ENST00000547562 GSE1Q14687 1217 aa19.42■□□□□ 0.7
BRF1-212ENST00000547562 MIS18AQ9NYP9 233 aa19.42■□□□□ 0.7
BRF1-212ENST00000547562 LRRC37A3O60309 1634 aa19.42■□□□□ 0.7
BRF1-212ENST00000547562 TSPYL4Q9UJ04 414 aa19.42■□□□□ 0.7
BRF1-212ENST00000547562 ATP10DQ9P241 1426 aa19.41■□□□□ 0.7
BRF1-212ENST00000547562 HOXC9P31274 260 aa19.41■□□□□ 0.7
BRF1-212ENST00000547562 RBM25P49756 843 aaKnown RBP19.41■□□□□ 0.7
BRF1-212ENST00000547562 NUTM2GQ5VZR2 741 aa19.41■□□□□ 0.7
BRF1-212ENST00000547562 DCTPP1Q9H773 170 aa19.41■□□□□ 0.7
BRF1-212ENST00000547562 NWD1Q149M9 1564 aa19.4■□□□□ 0.7
BRF1-212ENST00000547562 MSH6P52701 1360 aa19.4■□□□□ 0.7
BRF1-212ENST00000547562 SLC4A2P04920 1241 aa19.4■□□□□ 0.7
BRF1-212ENST00000547562 HTATSF1O43719 755 aaKnown RBP19.4■□□□□ 0.7
BRF1-212ENST00000547562 ANKRD44Q8N8A2 993 aa19.4■□□□□ 0.7
BRF1-212ENST00000547562 ABTB2Q8N961 1025 aa19.4■□□□□ 0.7
BRF1-212ENST00000547562 RPAP2Q8IXW5 612 aaPredicted RBP19.39■□□□□ 0.69
BRF1-212ENST00000547562 ZNF142P52746 1687 aaPredicted RBP19.38■□□□□ 0.69
BRF1-212ENST00000547562 RTL1A6NKG5 1358 aa19.38■□□□□ 0.69
BRF1-212ENST00000547562 LTN1O94822 1766 aa19.38■□□□□ 0.69
BRF1-212ENST00000547562 TRHP20396 242 aaPredicted RBP19.37■□□□□ 0.69
BRF1-212ENST00000547562 CEP85Q6P2H3 762 aa19.37■□□□□ 0.69
BRF1-212ENST00000547562 ANKLE2Q86XL3 938 aa19.36■□□□□ 0.69
BRF1-212ENST00000547562 CACNA1FO60840 1977 aa19.36■□□□□ 0.69
BRF1-212ENST00000547562 GNAT3A8MTJ3 354 aa19.36■□□□□ 0.69
BRF1-212ENST00000547562 PHF8Q9UPP1 1060 aa19.36■□□□□ 0.69
BRF1-212ENST00000547562 TBC1D9Q6ZT07 1266 aa19.35■□□□□ 0.69
BRF1-212ENST00000547562 MEIS3Q99687 375 aa19.35■□□□□ 0.69
BRF1-212ENST00000547562 PLEKHM2Q8IWE5 1019 aa19.35■□□□□ 0.69
BRF1-212ENST00000547562 FAM208AQ9UK61 1670 aaKnown RBP19.35■□□□□ 0.69
BRF1-212ENST00000547562 G2E3Q7L622 706 aa19.34■□□□□ 0.69
BRF1-212ENST00000547562 HSCBQ8IWL3 235 aa19.34■□□□□ 0.69
BRF1-212ENST00000547562 MAP3K5Q99683 1374 aa19.33■□□□□ 0.69
BRF1-212ENST00000547562 GSPT1P15170 499 aaKnown RBP19.32■□□□□ 0.68
BRF1-212ENST00000547562 C14orf37Q86TY3 774 aa19.32■□□□□ 0.68
BRF1-212ENST00000547562 SPRYD3Q8NCJ5 442 aa19.32■□□□□ 0.68
BRF1-212ENST00000547562 LTV1Q96GA3 475 aaPredicted RBP19.32■□□□□ 0.68
BRF1-212ENST00000547562 CDC45O75419 566 aa19.32■□□□□ 0.68
BRF1-212ENST00000547562 CCT4P50991 539 aaKnown RBP19.32■□□□□ 0.68
BRF1-212ENST00000547562 SNX21Q969T3 373 aa19.32■□□□□ 0.68
BRF1-212ENST00000547562 STK31Q9BXU1 1019 aa19.32■□□□□ 0.68
BRF1-212ENST00000547562 NFAT5O94916 1531 aa19.31■□□□□ 0.68
BRF1-212ENST00000547562 SETD1BQ9UPS6 1966 aaKnown RBP19.31■□□□□ 0.68
BRF1-212ENST00000547562 ADGRL3Q9HAR2 1447 aa19.3■□□□□ 0.68
BRF1-212ENST00000547562 F6X3S4 739 aa19.3■□□□□ 0.68
BRF1-212ENST00000547562 TTC22Q5TAA0 569 aa19.3■□□□□ 0.68
BRF1-212ENST00000547562 SLC4A10Q6U841 1118 aa19.3■□□□□ 0.68
BRF1-212ENST00000547562 IL17REQ8NFR9 667 aa19.3■□□□□ 0.68
BRF1-212ENST00000547562 BABAM1Q9NWV8 329 aa19.3■□□□□ 0.68
BRF1-212ENST00000547562 SOS1Q07889 1333 aaPredicted RBP19.29■□□□□ 0.68
BRF1-212ENST00000547562 CCDC30Q5VVM6 783 aa19.29■□□□□ 0.68
BRF1-212ENST00000547562 KIF2CQ99661 725 aa19.29■□□□□ 0.68
BRF1-212ENST00000547562 NCOA3Q9Y6Q9 1424 aa19.29■□□□□ 0.68
BRF1-212ENST00000547562 C16orf71Q8IYS4 520 aaPredicted RBP19.29■□□□□ 0.68
BRF1-212ENST00000547562 RBM33Q96EV2 1170 aaKnown RBP19.29■□□□□ 0.68
BRF1-212ENST00000547562 CHMP5Q9NZZ3 219 aa19.29■□□□□ 0.68
BRF1-212ENST00000547562 HMMRO75330 724 aa19.28■□□□□ 0.68
BRF1-212ENST00000547562 IP6K1Q92551 441 aa19.28■□□□□ 0.68
BRF1-212ENST00000547562 N4BP2Q86UW6 1770 aaPredicted RBP19.28■□□□□ 0.68
BRF1-212ENST00000547562 TAF7Q15545 349 aaPredicted RBP19.27■□□□□ 0.68
BRF1-212ENST00000547562 FLIIQ13045 1269 aa19.27■□□□□ 0.68
BRF1-212ENST00000547562 USHBP1Q8N6Y0 703 aa19.27■□□□□ 0.68
BRF1-212ENST00000547562 PHRF1Q9P1Y6 1649 aaKnown RBP19.27■□□□□ 0.67
BRF1-212ENST00000547562 EIF5BO60841 1220 aaKnown RBP19.26■□□□□ 0.67
BRF1-212ENST00000547562 ADAMTSL3P82987 1691 aa19.26■□□□□ 0.67
BRF1-212ENST00000547562 ESCO1Q5FWF5 840 aa19.26■□□□□ 0.67
BRF1-212ENST00000547562 OTUD7AQ8TE49 926 aaPredicted RBP19.26■□□□□ 0.67
BRF1-212ENST00000547562 PSME1Q06323 249 aa19.25■□□□□ 0.67
BRF1-212ENST00000547562 SMARCA5O60264 1052 aaPredicted RBP19.25■□□□□ 0.67
BRF1-212ENST00000547562 FKBP5Q13451 457 aaPredicted RBP19.25■□□□□ 0.67
BRF1-212ENST00000547562 GNAI2P04899 355 aa19.24■□□□□ 0.67
BRF1-212ENST00000547562 RGPD2P0DJD1 1756 aa19.24■□□□□ 0.67
BRF1-212ENST00000547562 APBB1O00213 710 aa19.24■□□□□ 0.67
BRF1-212ENST00000547562 KCNH5Q8NCM2 988 aa19.24■□□□□ 0.67
BRF1-212ENST00000547562 CEMIPQ8WUJ3 1361 aa19.23■□□□□ 0.67
BRF1-212ENST00000547562 DDIT3P35638 169 aa19.23■□□□□ 0.67
BRF1-212ENST00000547562 NBPF6Q5VWK0 638 aa19.23■□□□□ 0.67
BRF1-212ENST00000547562 NECTIN2Q92692 538 aa19.23■□□□□ 0.67
BRF1-212ENST00000547562 NBPF4Q96M43 638 aa19.23■□□□□ 0.67
BRF1-212ENST00000547562 MED1Q15648 1581 aaPredicted RBP19.22■□□□□ 0.67
BRF1-212ENST00000547562 GNAI3P08754 354 aa19.22■□□□□ 0.67
BRF1-212ENST00000547562 PXDNLA1KZ92 1463 aa19.22■□□□□ 0.67
BRF1-212ENST00000547562 NPHP4O75161 1426 aaPredicted RBP19.21■□□□□ 0.67
BRF1-212ENST00000547562 MCM4P33991 863 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms