RNA–Protein interactions for RNA: ENST00000547188.1

PRDM4-202, Transcript of PR/SET domain 4, humanhuman

TSL 3

Gene PRDM4, Length 640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-202ENST00000547188 CCNL1Q9UK58 526 aaPredicted RBP34.14■■■■□ 3.06
PRDM4-202ENST00000547188 NSD2O96028 1365 aa34.09■■■■□ 3.05
PRDM4-202ENST00000547188 ANKRD36BQ8N2N9 1353 aa34.08■■■■□ 3.05
PRDM4-202ENST00000547188 EVC2Q86UK5 1308 aa34.07■■■■□ 3.05
PRDM4-202ENST00000547188 KTN1Q86UP2 1357 aaKnown RBP34.06■■■■□ 3.04
PRDM4-202ENST00000547188 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.05■■■■□ 3.04
PRDM4-202ENST00000547188 IGSF1Q8N6C5 1336 aa34.04■■■■□ 3.04
PRDM4-202ENST00000547188 WDR90Q96KV7 1748 aa34.03■■■■□ 3.04
PRDM4-202ENST00000547188 C5P01031 1676 aa34.01■■■■□ 3.04
PRDM4-202ENST00000547188 MON2Q7Z3U7 1717 aa34.01■■■■□ 3.03
PRDM4-202ENST00000547188 TOMM70O94826 608 aa33.99■■■■□ 3.03
PRDM4-202ENST00000547188 NME9Q86XW9 330 aa33.99■■■■□ 3.03
PRDM4-202ENST00000547188 HTRA3P83110 453 aa33.98■■■■□ 3.03
PRDM4-202ENST00000547188 USP54Q70EL1 1684 aa33.98■■■■□ 3.03
PRDM4-202ENST00000547188 USP31Q70CQ4 1352 aa33.98■■■■□ 3.03
PRDM4-202ENST00000547188 LTV1Q96GA3 475 aaPredicted RBP33.97■■■■□ 3.03
PRDM4-202ENST00000547188 USP47Q96K76 1375 aa33.96■■■■□ 3.03
PRDM4-202ENST00000547188 TAF1LQ8IZX4 1826 aa33.95■■■■□ 3.03
PRDM4-202ENST00000547188 TNS4Q8IZW8 715 aa33.95■■■■□ 3.03
PRDM4-202ENST00000547188 PRELPP51888 382 aa33.92■■■■□ 3.02
PRDM4-202ENST00000547188 RGPD2P0DJD1 1756 aa33.91■■■■□ 3.02
PRDM4-202ENST00000547188 FAM208AQ9UK61 1670 aaKnown RBP33.9■■■■□ 3.02
PRDM4-202ENST00000547188 KLRG1Q96E93 195 aa33.9■■■■□ 3.02
PRDM4-202ENST00000547188 NMRK2Q9NPI5 230 aa33.9■■■■□ 3.02
PRDM4-202ENST00000547188 FLAD1Q8NFF5 587 aa33.89■■■■□ 3.02
PRDM4-202ENST00000547188 SMIM5Q71RC9 77 aa33.88■■■■□ 3.01
PRDM4-202ENST00000547188 CICQ96RK0 1608 aaPredicted RBP33.88■■■■□ 3.01
PRDM4-202ENST00000547188 JMYQ8N9B5 988 aa33.87■■■■□ 3.01
PRDM4-202ENST00000547188 ZCRB1Q8TBF4 217 aaKnown RBP33.87■■■■□ 3.01
PRDM4-202ENST00000547188 AMIGO3Q86WK7 504 aa33.86■■■■□ 3.01
PRDM4-202ENST00000547188 TOGARAM1Q9Y4F4 1720 aa33.84■■■■□ 3.01
PRDM4-202ENST00000547188 IP6K1Q92551 441 aa33.84■■■■□ 3.01
PRDM4-202ENST00000547188 SBNO2Q9Y2G9 1366 aa33.84■■■■□ 3.01
PRDM4-202ENST00000547188 MEGF6O75095 1541 aa33.82■■■■□ 3
PRDM4-202ENST00000547188 UBR3Q6ZT12 1888 aa33.82■■■■□ 3
PRDM4-202ENST00000547188 C4BP0C0L5 1744 aa33.82■■■■□ 3
PRDM4-202ENST00000547188 PHF14O94880 888 aa33.81■■■■□ 3
PRDM4-202ENST00000547188 N4BP2Q86UW6 1770 aaPredicted RBP33.78■■■■□ 3
PRDM4-202ENST00000547188 CD163L1Q9NR16 1453 aa33.78■■■■□ 3
PRDM4-202ENST00000547188 RBM46Q8TBY0 533 aaKnown RBP33.78■■■■□ 3
PRDM4-202ENST00000547188 PCNTO95613 3336 aa33.77■■■■□ 3
PRDM4-202ENST00000547188 AK7Q96M32 723 aa33.77■■■■□ 3
PRDM4-202ENST00000547188 PALLDQ8WX93 1383 aa33.76■■■■□ 3
PRDM4-202ENST00000547188 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.73■■■□□ 2.99
PRDM4-202ENST00000547188 C16orf71Q8IYS4 520 aaPredicted RBP33.73■■■□□ 2.99
PRDM4-202ENST00000547188 KIAA1551Q9HCM1 1747 aa33.73■■■□□ 2.99
PRDM4-202ENST00000547188 BCS1LQ9Y276 419 aa33.72■■■□□ 2.99
PRDM4-202ENST00000547188 ARHGAP27Q6ZUM4 889 aa33.71■■■□□ 2.99
PRDM4-202ENST00000547188 TMC1Q8TDI8 760 aa33.71■■■□□ 2.99
PRDM4-202ENST00000547188 PXDNLA1KZ92 1463 aa33.69■■■□□ 2.98
PRDM4-202ENST00000547188 MPRIPQ6WCQ1 1025 aa33.69■■■□□ 2.98
PRDM4-202ENST00000547188 KIF13BQ9NQT8 1826 aa33.68■■■□□ 2.98
PRDM4-202ENST00000547188 HOXC9P31274 260 aa33.68■■■□□ 2.98
PRDM4-202ENST00000547188 ITGB4P16144 1822 aa33.67■■■□□ 2.98
PRDM4-202ENST00000547188 FBLN1P23142 703 aa33.67■■■□□ 2.98
PRDM4-202ENST00000547188 HMGB2P26583 209 aaKnown RBP33.66■■■□□ 2.98
PRDM4-202ENST00000547188 HDGFL2Q7Z4V5 671 aaPredicted RBP33.66■■■□□ 2.98
PRDM4-202ENST00000547188 USHBP1Q8N6Y0 703 aa33.66■■■□□ 2.98
PRDM4-202ENST00000547188 EDC4Q6P2E9 1401 aaKnown RBP33.65■■■□□ 2.98
PRDM4-202ENST00000547188 MAP3K19Q56UN5 1328 aa33.65■■■□□ 2.98
PRDM4-202ENST00000547188 A0A0G2JLW4 131 aa33.65■■■□□ 2.98
PRDM4-202ENST00000547188 FSTL1Q12841 308 aa33.65■■■□□ 2.98
PRDM4-202ENST00000547188 SLC12A5Q9H2X9 1139 aa33.65■■■□□ 2.98
PRDM4-202ENST00000547188 AMPHP49418 695 aa33.63■■■□□ 2.97
PRDM4-202ENST00000547188 NBPF6Q5VWK0 638 aa33.62■■■□□ 2.97
PRDM4-202ENST00000547188 NBPF4Q96M43 638 aa33.62■■■□□ 2.97
PRDM4-202ENST00000547188 MMP10P09238 476 aa33.61■■■□□ 2.97
PRDM4-202ENST00000547188 SSFA2P28290 1259 aa33.61■■■□□ 2.97
PRDM4-202ENST00000547188 C9orf131Q5VYM1 1079 aa33.61■■■□□ 2.97
PRDM4-202ENST00000547188 NSD3Q9BZ95 1437 aa33.61■■■□□ 2.97
PRDM4-202ENST00000547188 ROCK2O75116 1388 aaKnown RBP33.6■■■□□ 2.97
PRDM4-202ENST00000547188 KCPQ6ZWJ8 1503 aa33.6■■■□□ 2.97
PRDM4-202ENST00000547188 HSPA1AP0DMV8 641 aaKnown RBP33.59■■■□□ 2.97
PRDM4-202ENST00000547188 HSPA1BP0DMV9 641 aaKnown RBP33.59■■■□□ 2.97
PRDM4-202ENST00000547188 L3MBTL2Q969R5 705 aa33.59■■■□□ 2.97
PRDM4-202ENST00000547188 PKD1L3Q7Z443 1732 aa33.59■■■□□ 2.97
PRDM4-202ENST00000547188 LINC00116Q8NCU8 138 aa33.58■■■□□ 2.97
PRDM4-202ENST00000547188 RAPGEF4Q8WZA2 1011 aa33.58■■■□□ 2.97
PRDM4-202ENST00000547188 A0A1W2PP64 1363 aa33.58■■■□□ 2.97
PRDM4-202ENST00000547188 BRCA1P38398 1863 aaKnown RBP33.57■■■□□ 2.96
PRDM4-202ENST00000547188 SMARCC1Q92922 1105 aaPredicted RBP33.57■■■□□ 2.96
PRDM4-202ENST00000547188 MAP2P11137 1827 aaKnown RBP33.57■■■□□ 2.96
PRDM4-202ENST00000547188 FCHSD2O94868 740 aa33.56■■■□□ 2.96
PRDM4-202ENST00000547188 TGFB2P61812 414 aa33.56■■■□□ 2.96
PRDM4-202ENST00000547188 RRAGCQ9HB90 399 aa33.56■■■□□ 2.96
PRDM4-202ENST00000547188 CGNL1Q0VF96 1302 aa33.54■■■□□ 2.96
PRDM4-202ENST00000547188 DPEP1P16444 411 aa33.54■■■□□ 2.96
PRDM4-202ENST00000547188 TATP17735 454 aaPredicted RBP33.54■■■□□ 2.96
PRDM4-202ENST00000547188 PCDH11XQ9BZA7 1347 aa33.53■■■□□ 2.96
PRDM4-202ENST00000547188 PCDH11YQ9BZA8 1340 aa33.53■■■□□ 2.96
PRDM4-202ENST00000547188 GNPATO15228 680 aa33.53■■■□□ 2.96
PRDM4-202ENST00000547188 TERF2IPQ9NYB0 399 aa33.52■■■□□ 2.96
PRDM4-202ENST00000547188 ARFGEF1Q9Y6D6 1849 aa33.51■■■□□ 2.96
PRDM4-202ENST00000547188 PLEKHG2Q9H7P9 1386 aa33.51■■■□□ 2.96
PRDM4-202ENST00000547188 SLC34A2O95436 690 aa33.51■■■□□ 2.95
PRDM4-202ENST00000547188 PIGBQ92521 554 aa33.51■■■□□ 2.95
PRDM4-202ENST00000547188 CYP27B1O15528 508 aa33.5■■■□□ 2.95
PRDM4-202ENST00000547188 COG3Q96JB2 828 aa33.5■■■□□ 2.95
PRDM4-202ENST00000547188 C10orf71Q711Q0 1435 aa33.5■■■□□ 2.95
PRDM4-202ENST00000547188 KDM2BQ8NHM5 1336 aa33.5■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms