RNA–Protein interactions for RNA: ENST00000546983.1

NKX2-1-205, Transcript of NK2 homeobox 1, humanhuman

TSL 4

Gene NKX2-1, Length 653 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-205ENST00000546983 PCDH11YQ9BZA8 1340 aa34.25■■■■□ 3.07
NKX2-1-205ENST00000546983 MEGF6O75095 1541 aa34.24■■■■□ 3.07
NKX2-1-205ENST00000546983 PARD3Q8TEW0 1356 aa34.23■■■■□ 3.07
NKX2-1-205ENST00000546983 EP400Q96L91 3159 aa34.22■■■■□ 3.07
NKX2-1-205ENST00000546983 RGPD1P0DJD0 1748 aa34.22■■■■□ 3.07
NKX2-1-205ENST00000546983 TRIM37O94972 964 aa34.22■■■■□ 3.07
NKX2-1-205ENST00000546983 PPP2R1AP30153 589 aa34.21■■■■□ 3.07
NKX2-1-205ENST00000546983 DDX54Q8TDD1 881 aaKnown RBP34.21■■■■□ 3.07
NKX2-1-205ENST00000546983 BCL11BQ9C0K0 894 aaPredicted RBP34.21■■■■□ 3.07
NKX2-1-205ENST00000546983 RGPD2P0DJD1 1756 aa34.21■■■■□ 3.07
NKX2-1-205ENST00000546983 NUDCQ9Y266 331 aa34.2■■■■□ 3.07
NKX2-1-205ENST00000546983 AMOTQ4VCS5 1084 aa34.18■■■■□ 3.06
NKX2-1-205ENST00000546983 KDRP35968 1356 aa34.17■■■■□ 3.06
NKX2-1-205ENST00000546983 APBA3O96018 575 aa34.15■■■■□ 3.06
NKX2-1-205ENST00000546983 PLEKHO1Q53GL0 409 aaPredicted RBP34.15■■■■□ 3.06
NKX2-1-205ENST00000546983 SULT6B1Q6IMI4 303 aa34.13■■■■□ 3.05
NKX2-1-205ENST00000546983 PLSCR1O15162 318 aa34.1■■■■□ 3.05
NKX2-1-205ENST00000546983 HSP90AB1P08238 724 aaKnown RBP34.1■■■■□ 3.05
NKX2-1-205ENST00000546983 IFNL2Q8IZJ0 200 aa34.09■■■■□ 3.05
NKX2-1-205ENST00000546983 COL3A1P02461 1466 aaPredicted RBP34.08■■■■□ 3.05
NKX2-1-205ENST00000546983 PKD1L3Q7Z443 1732 aa34.07■■■■□ 3.05
NKX2-1-205ENST00000546983 NKX1-1Q15270 411 aaPredicted RBP34.07■■■■□ 3.04
NKX2-1-205ENST00000546983 U2SURPO15042 1029 aaKnown RBP34.06■■■■□ 3.04
NKX2-1-205ENST00000546983 DEFB132Q7Z7B7 95 aa34.06■■■■□ 3.04
NKX2-1-205ENST00000546983 MYBBP1AQ9BQG0 1328 aaKnown RBP34.05■■■■□ 3.04
NKX2-1-205ENST00000546983 TNS1Q9HBL0 1735 aaKnown RBP34.05■■■■□ 3.04
NKX2-1-205ENST00000546983 HMGB2P26583 209 aaKnown RBP34.05■■■■□ 3.04
NKX2-1-205ENST00000546983 CYP27B1O15528 508 aa34.04■■■■□ 3.04
NKX2-1-205ENST00000546983 EN1Q05925 392 aaPredicted RBP34.03■■■■□ 3.04
NKX2-1-205ENST00000546983 C1orf141Q5JVX7 400 aa34.02■■■■□ 3.04
NKX2-1-205ENST00000546983 AEBP1Q8IUX7 1158 aa34.02■■■■□ 3.04
NKX2-1-205ENST00000546983 CAMKK2Q96RR4 588 aa34.02■■■■□ 3.04
NKX2-1-205ENST00000546983 SBF2Q86WG5 1849 aa34.02■■■■□ 3.04
NKX2-1-205ENST00000546983 NHSQ6T4R5 1651 aa34.01■■■■□ 3.04
NKX2-1-205ENST00000546983 ACSBG1Q96GR2 724 aa34.01■■■■□ 3.03
NKX2-1-205ENST00000546983 PHKG2P15735 406 aa34■■■■□ 3.03
NKX2-1-205ENST00000546983 SHANK3Q9BYB0 1731 aa33.99■■■■□ 3.03
NKX2-1-205ENST00000546983 HMOX1P09601 288 aa33.98■■■■□ 3.03
NKX2-1-205ENST00000546983 ZNF530Q6P9A1 599 aaPredicted RBP33.98■■■■□ 3.03
NKX2-1-205ENST00000546983 SYTL4Q96C24 671 aaPredicted RBP33.98■■■■□ 3.03
NKX2-1-205ENST00000546983 DCAF5Q96JK2 942 aa33.98■■■■□ 3.03
NKX2-1-205ENST00000546983 PNNQ9H307 717 aaKnown RBP33.98■■■■□ 3.03
NKX2-1-205ENST00000546983 PRKRIP1Q9H875 184 aaPredicted RBP33.98■■■■□ 3.03
NKX2-1-205ENST00000546983 KCNQ2O43526 872 aa33.97■■■■□ 3.03
NKX2-1-205ENST00000546983 FCHSD2O94868 740 aa33.97■■■■□ 3.03
NKX2-1-205ENST00000546983 PRIM1P49642 420 aaKnown RBP33.97■■■■□ 3.03
NKX2-1-205ENST00000546983 RGPD3A6NKT7 1758 aaPredicted RBP33.96■■■■□ 3.03
NKX2-1-205ENST00000546983 RGPD4Q7Z3J3 1758 aa33.96■■■■□ 3.03
NKX2-1-205ENST00000546983 NEFMP07197 916 aa33.95■■■■□ 3.03
NKX2-1-205ENST00000546983 U2AF1L5P0DN76 240 aaPredicted RBP33.95■■■■□ 3.03
NKX2-1-205ENST00000546983 U2AF1Q01081 240 aaKnown RBP eCLIP33.95■■■■□ 3.03
NKX2-1-205ENST00000546983 EZH2Q15910 746 aaKnown RBP33.94■■■■□ 3.02
NKX2-1-205ENST00000546983 AKAP4Q5JQC9 854 aa33.93■■■■□ 3.02
NKX2-1-205ENST00000546983 ERVV-2B6SEH9 535 aa33.92■■■■□ 3.02
NKX2-1-205ENST00000546983 NBPF14Q5TI25 921 aa33.92■■■■□ 3.02
NKX2-1-205ENST00000546983 GAS2L2Q8NHY3 880 aa33.92■■■■□ 3.02
NKX2-1-205ENST00000546983 SMARCC1Q92922 1105 aaPredicted RBP33.89■■■■□ 3.02
NKX2-1-205ENST00000546983 SLC27A3Q5K4L6 730 aa33.88■■■■□ 3.01
NKX2-1-205ENST00000546983 TMOD3Q9NYL9 352 aa33.88■■■■□ 3.01
NKX2-1-205ENST00000546983 ANP32CO43423 234 aa33.87■■■■□ 3.01
NKX2-1-205ENST00000546983 PTF1AQ7RTS3 328 aa33.87■■■■□ 3.01
NKX2-1-205ENST00000546983 RSPH6AQ9H0K4 717 aa33.87■■■■□ 3.01
NKX2-1-205ENST00000546983 DOT1LQ8TEK3 1739 aa33.87■■■■□ 3.01
NKX2-1-205ENST00000546983 PRKAR2BP31323 418 aa33.85■■■■□ 3.01
NKX2-1-205ENST00000546983 TXNRD1Q16881 649 aa33.85■■■■□ 3.01
NKX2-1-205ENST00000546983 MPRIPQ6WCQ1 1025 aa33.85■■■■□ 3.01
NKX2-1-205ENST00000546983 MTHFSDQ2M296 383 aaKnown RBP33.82■■■■□ 3
NKX2-1-205ENST00000546983 KAT6BQ8WYB5 2073 aa33.82■■■■□ 3
NKX2-1-205ENST00000546983 BTAF1O14981 1849 aa33.81■■■■□ 3
NKX2-1-205ENST00000546983 CABP4P57796 275 aa33.81■■■■□ 3
NKX2-1-205ENST00000546983 RREB1Q92766 1687 aa33.8■■■■□ 3
NKX2-1-205ENST00000546983 GNAT3A8MTJ3 354 aa33.78■■■■□ 3
NKX2-1-205ENST00000546983 PIGBQ92521 554 aa33.78■■■■□ 3
NKX2-1-205ENST00000546983 WDR43Q15061 677 aaKnown RBP eCLIP33.77■■■■□ 3
NKX2-1-205ENST00000546983 PROM2Q8N271 834 aa33.76■■■□□ 2.99
NKX2-1-205ENST00000546983 MAP3K5Q99683 1374 aa33.75■■■□□ 2.99
NKX2-1-205ENST00000546983 KDM6AO15550 1401 aaPredicted RBP33.74■■■□□ 2.99
NKX2-1-205ENST00000546983 HTATSF1O43719 755 aaKnown RBP33.74■■■□□ 2.99
NKX2-1-205ENST00000546983 MAPK8IP3Q9UPT6 1336 aa33.74■■■□□ 2.99
NKX2-1-205ENST00000546983 PALLDQ8WX93 1383 aa33.73■■■□□ 2.99
NKX2-1-205ENST00000546983 RNMTO43148 476 aaKnown RBP33.72■■■□□ 2.99
NKX2-1-205ENST00000546983 STK32BQ9NY57 414 aa33.72■■■□□ 2.99
NKX2-1-205ENST00000546983 TOGARAM1Q9Y4F4 1720 aa33.71■■■□□ 2.99
NKX2-1-205ENST00000546983 RTF1Q92541 710 aaKnown RBP33.71■■■□□ 2.99
NKX2-1-205ENST00000546983 CCNL1Q9UK58 526 aaPredicted RBP33.71■■■□□ 2.99
NKX2-1-205ENST00000546983 PHACTR3Q96KR7 559 aa33.7■■■□□ 2.99
NKX2-1-205ENST00000546983 SLC52A2Q9HAB3 445 aa33.7■■■□□ 2.99
NKX2-1-205ENST00000546983 NUP188Q5SRE5 1749 aa33.69■■■□□ 2.98
NKX2-1-205ENST00000546983 ITGB4P16144 1822 aa33.67■■■□□ 2.98
NKX2-1-205ENST00000546983 NFATC2IPQ8NCF5 419 aa33.67■■■□□ 2.98
NKX2-1-205ENST00000546983 TEFQ10587 303 aa33.66■■■□□ 2.98
NKX2-1-205ENST00000546983 PLEKHF1Q96S99 279 aa33.66■■■□□ 2.98
NKX2-1-205ENST00000546983 R3HDM1Q15032 1099 aaKnown RBP33.64■■■□□ 2.98
NKX2-1-205ENST00000546983 SLC15A2Q16348 729 aa33.64■■■□□ 2.98
NKX2-1-205ENST00000546983 MRC1P22897 1456 aa33.63■■■□□ 2.97
NKX2-1-205ENST00000546983 LY75O60449 1722 aa33.63■■■□□ 2.97
NKX2-1-205ENST00000546983 LOC102724428A0A0B4J2F2 783 aa33.63■■■□□ 2.97
NKX2-1-205ENST00000546983 SIK1P57059 783 aa33.63■■■□□ 2.97
NKX2-1-205ENST00000546983 LGR6Q9HBX8 967 aa33.63■■■□□ 2.97
NKX2-1-205ENST00000546983 ATG3Q9NT62 314 aa33.63■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms