RNA–Protein interactions for RNA: ENST00000546272.5

C12orf43-209, Transcript of chromosome 12 open reading frame 43, humanhuman

TSL 2

Gene C12orf43, Length 1,339 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf43-209ENST00000546272 KTN1Q86UP2 1357 aaKnown RBP25.61■■□□□ 1.69
C12orf43-209ENST00000546272 DOT1LQ8TEK3 1739 aa25.6■■□□□ 1.69
C12orf43-209ENST00000546272 USP54Q70EL1 1684 aa25.59■■□□□ 1.69
C12orf43-209ENST00000546272 NSD2O96028 1365 aa25.58■■□□□ 1.69
C12orf43-209ENST00000546272 USP31Q70CQ4 1352 aa25.58■■□□□ 1.69
C12orf43-209ENST00000546272 MON2Q7Z3U7 1717 aa25.55■■□□□ 1.68
C12orf43-209ENST00000546272 TOMM70O94826 608 aa25.55■■□□□ 1.68
C12orf43-209ENST00000546272 FLAD1Q8NFF5 587 aa25.55■■□□□ 1.68
C12orf43-209ENST00000546272 IGSF1Q8N6C5 1336 aa25.54■■□□□ 1.68
C12orf43-209ENST00000546272 FAM208AQ9UK61 1670 aaKnown RBP25.53■■□□□ 1.68
C12orf43-209ENST00000546272 COL13A1Q5TAT6 717 aaPredicted RBP25.53■■□□□ 1.68
C12orf43-209ENST00000546272 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.53■■□□□ 1.68
C12orf43-209ENST00000546272 USP47Q96K76 1375 aa25.53■■□□□ 1.68
C12orf43-209ENST00000546272 C5P01031 1676 aa25.52■■□□□ 1.68
C12orf43-209ENST00000546272 HMGB2P26583 209 aaKnown RBP25.52■■□□□ 1.68
C12orf43-209ENST00000546272 CAPN15O75808 1086 aa25.51■■□□□ 1.67
C12orf43-209ENST00000546272 WDR90Q96KV7 1748 aa25.5■■□□□ 1.67
C12orf43-209ENST00000546272 WWC3Q9ULE0 1092 aa25.49■■□□□ 1.67
C12orf43-209ENST00000546272 NME9Q86XW9 330 aa25.48■■□□□ 1.67
C12orf43-209ENST00000546272 CICQ96RK0 1608 aaPredicted RBP25.47■■□□□ 1.67
C12orf43-209ENST00000546272 TAF1LQ8IZX4 1826 aa25.47■■□□□ 1.67
C12orf43-209ENST00000546272 ZCRB1Q8TBF4 217 aaKnown RBP25.46■■□□□ 1.67
C12orf43-209ENST00000546272 PRELPP51888 382 aa25.45■■□□□ 1.66
C12orf43-209ENST00000546272 JMYQ8N9B5 988 aa25.45■■□□□ 1.66
C12orf43-209ENST00000546272 IP6K1Q92551 441 aa25.45■■□□□ 1.66
C12orf43-209ENST00000546272 PCGF6Q9BYE7 350 aa25.45■■□□□ 1.66
C12orf43-209ENST00000546272 TNS4Q8IZW8 715 aa25.44■■□□□ 1.66
C12orf43-209ENST00000546272 KLRG1Q96E93 195 aa25.44■■□□□ 1.66
C12orf43-209ENST00000546272 LTV1Q96GA3 475 aaPredicted RBP25.43■■□□□ 1.66
C12orf43-209ENST00000546272 SBNO2Q9Y2G9 1366 aa25.43■■□□□ 1.66
C12orf43-209ENST00000546272 SIN3AQ96ST3 1273 aa25.42■■□□□ 1.66
C12orf43-209ENST00000546272 RBM46Q8TBY0 533 aaKnown RBP25.39■■□□□ 1.66
C12orf43-209ENST00000546272 CD163L1Q9NR16 1453 aa25.38■■□□□ 1.65
C12orf43-209ENST00000546272 C4BP0C0L5 1744 aa25.38■■□□□ 1.65
C12orf43-209ENST00000546272 NMRK2Q9NPI5 230 aa25.37■■□□□ 1.65
C12orf43-209ENST00000546272 MEGF6O75095 1541 aa25.37■■□□□ 1.65
C12orf43-209ENST00000546272 UBR3Q6ZT12 1888 aa25.37■■□□□ 1.65
C12orf43-209ENST00000546272 NEUROD1Q13562 356 aa25.37■■□□□ 1.65
C12orf43-209ENST00000546272 AK7Q96M32 723 aa25.37■■□□□ 1.65
C12orf43-209ENST00000546272 RGPD2P0DJD1 1756 aa25.36■■□□□ 1.65
C12orf43-209ENST00000546272 PALLDQ8WX93 1383 aa25.36■■□□□ 1.65
C12orf43-209ENST00000546272 NSD3Q9BZ95 1437 aa25.36■■□□□ 1.65
C12orf43-209ENST00000546272 TOGARAM1Q9Y4F4 1720 aa25.36■■□□□ 1.65
C12orf43-209ENST00000546272 EDC4Q6P2E9 1401 aaKnown RBP25.35■■□□□ 1.65
C12orf43-209ENST00000546272 HTRA3P83110 453 aa25.35■■□□□ 1.65
C12orf43-209ENST00000546272 HDGFL2Q7Z4V5 671 aaPredicted RBP25.35■■□□□ 1.65
C12orf43-209ENST00000546272 C16orf71Q8IYS4 520 aaPredicted RBP25.34■■□□□ 1.65
C12orf43-209ENST00000546272 PHF14O94880 888 aa25.33■■□□□ 1.64
C12orf43-209ENST00000546272 FSTL1Q12841 308 aa25.33■■□□□ 1.64
C12orf43-209ENST00000546272 AMIGO3Q86WK7 504 aa25.33■■□□□ 1.64
C12orf43-209ENST00000546272 CGNL1Q0VF96 1302 aa25.32■■□□□ 1.64
C12orf43-209ENST00000546272 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.32■■□□□ 1.64
C12orf43-209ENST00000546272 HOXC9P31274 260 aa25.31■■□□□ 1.64
C12orf43-209ENST00000546272 L3MBTL2Q969R5 705 aa25.31■■□□□ 1.64
C12orf43-209ENST00000546272 PCNTO95613 3336 aa25.31■■□□□ 1.64
C12orf43-209ENST00000546272 SSFA2P28290 1259 aa25.3■■□□□ 1.64
C12orf43-209ENST00000546272 TMC1Q8TDI8 760 aa25.3■■□□□ 1.64
C12orf43-209ENST00000546272 KIF13BQ9NQT8 1826 aa25.3■■□□□ 1.64
C12orf43-209ENST00000546272 SMARCC1Q92922 1105 aaPredicted RBP25.29■■□□□ 1.64
C12orf43-209ENST00000546272 BCS1LQ9Y276 419 aa25.29■■□□□ 1.64
C12orf43-209ENST00000546272 ROCK2O75116 1388 aaKnown RBP25.29■■□□□ 1.64
C12orf43-209ENST00000546272 PXDNLA1KZ92 1463 aa25.29■■□□□ 1.64
C12orf43-209ENST00000546272 AMPHP49418 695 aa25.28■■□□□ 1.64
C12orf43-209ENST00000546272 MPRIPQ6WCQ1 1025 aa25.28■■□□□ 1.64
C12orf43-209ENST00000546272 MAP3K19Q56UN5 1328 aa25.28■■□□□ 1.64
C12orf43-209ENST00000546272 N4BP2Q86UW6 1770 aaPredicted RBP25.28■■□□□ 1.64
C12orf43-209ENST00000546272 KIAA1551Q9HCM1 1747 aa25.27■■□□□ 1.64
C12orf43-209ENST00000546272 ARHGAP27Q6ZUM4 889 aa25.27■■□□□ 1.64
C12orf43-209ENST00000546272 SMIM5Q71RC9 77 aa25.27■■□□□ 1.64
C12orf43-209ENST00000546272 TGFB2P61812 414 aa25.26■■□□□ 1.63
C12orf43-209ENST00000546272 RAPGEF4Q8WZA2 1011 aa25.26■■□□□ 1.63
C12orf43-209ENST00000546272 SLC12A5Q9H2X9 1139 aa25.26■■□□□ 1.63
C12orf43-209ENST00000546272 TERF2IPQ9NYB0 399 aa25.26■■□□□ 1.63
C12orf43-209ENST00000546272 ITGB4P16144 1822 aa25.24■■□□□ 1.63
C12orf43-209ENST00000546272 PLEKHG2Q9H7P9 1386 aa25.24■■□□□ 1.63
C12orf43-209ENST00000546272 PCDH11XQ9BZA7 1347 aa25.24■■□□□ 1.63
C12orf43-209ENST00000546272 PCDH11YQ9BZA8 1340 aa25.24■■□□□ 1.63
C12orf43-209ENST00000546272 NBPF6Q5VWK0 638 aa25.23■■□□□ 1.63
C12orf43-209ENST00000546272 NBPF4Q96M43 638 aa25.23■■□□□ 1.63
C12orf43-209ENST00000546272 A0A1W2PP64 1363 aa25.22■■□□□ 1.63
C12orf43-209ENST00000546272 MMP10P09238 476 aa25.22■■□□□ 1.63
C12orf43-209ENST00000546272 TATP17735 454 aaPredicted RBP25.22■■□□□ 1.63
C12orf43-209ENST00000546272 A0A0G2JLW4 131 aa25.21■■□□□ 1.63
C12orf43-209ENST00000546272 KDM2BQ8NHM5 1336 aa25.2■■□□□ 1.63
C12orf43-209ENST00000546272 C9orf131Q5VYM1 1079 aa25.2■■□□□ 1.62
C12orf43-209ENST00000546272 USHBP1Q8N6Y0 703 aa25.2■■□□□ 1.62
C12orf43-209ENST00000546272 COG3Q96JB2 828 aa25.2■■□□□ 1.62
C12orf43-209ENST00000546272 MAP2P11137 1827 aaKnown RBP25.19■■□□□ 1.62
C12orf43-209ENST00000546272 RTL1A6NKG5 1358 aa25.19■■□□□ 1.62
C12orf43-209ENST00000546272 BRCA1P38398 1863 aaKnown RBP25.19■■□□□ 1.62
C12orf43-209ENST00000546272 C10orf71Q711Q0 1435 aa25.18■■□□□ 1.62
C12orf43-209ENST00000546272 FCHSD2O94868 740 aa25.18■■□□□ 1.62
C12orf43-209ENST00000546272 PKD1L3Q7Z443 1732 aa25.18■■□□□ 1.62
C12orf43-209ENST00000546272 FBLN1P23142 703 aa25.17■■□□□ 1.62
C12orf43-209ENST00000546272 LINC00116Q8NCU8 138 aa25.17■■□□□ 1.62
C12orf43-209ENST00000546272 KCPQ6ZWJ8 1503 aa25.17■■□□□ 1.62
C12orf43-209ENST00000546272 GNPATO15228 680 aa25.16■■□□□ 1.62
C12orf43-209ENST00000546272 HSPA1AP0DMV8 641 aaKnown RBP25.16■■□□□ 1.62
C12orf43-209ENST00000546272 HSPA1BP0DMV9 641 aaKnown RBP25.16■■□□□ 1.62
C12orf43-209ENST00000546272 ARFGEF1Q9Y6D6 1849 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms