RNA–Protein interactions for RNA: ENST00000545718.2

SCAP-215, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 2,950 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-215ENST00000545718 RBM42Q9BTD8 480 aaKnown RBP19.45■□□□□ 0.7
SCAP-215ENST00000545718 OVOS2A0A0J9YW53 1432 aa19.44■□□□□ 0.7
SCAP-215ENST00000545718 OVOS2Q6IE36 1432 aa19.44■□□□□ 0.7
SCAP-215ENST00000545718 PTPRUQ92729 1446 aa19.44■□□□□ 0.7
SCAP-215ENST00000545718 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.44■□□□□ 0.7
SCAP-215ENST00000545718 MCM4P33991 863 aa19.44■□□□□ 0.7
SCAP-215ENST00000545718 RBM25P49756 843 aaKnown RBP19.44■□□□□ 0.7
SCAP-215ENST00000545718 OTUD7AQ8TE49 926 aaPredicted RBP19.44■□□□□ 0.7
SCAP-215ENST00000545718 UBR1Q8IWV7 1749 aa19.43■□□□□ 0.7
SCAP-215ENST00000545718 ZBTB7CA1YPR0 619 aa19.43■□□□□ 0.7
SCAP-215ENST00000545718 INTS3Q68E01 1043 aaKnown RBP19.43■□□□□ 0.7
SCAP-215ENST00000545718 MSH6P52701 1360 aa19.43■□□□□ 0.7
SCAP-215ENST00000545718 G2E3Q7L622 706 aa19.42■□□□□ 0.7
SCAP-215ENST00000545718 RBM33Q96EV2 1170 aaKnown RBP19.42■□□□□ 0.7
SCAP-215ENST00000545718 EYA1Q99502 592 aa19.42■□□□□ 0.7
SCAP-215ENST00000545718 AKAP12Q02952 1782 aa19.42■□□□□ 0.7
SCAP-215ENST00000545718 CDC45O75419 566 aa19.41■□□□□ 0.7
SCAP-215ENST00000545718 GSPT1P15170 499 aaKnown RBP19.41■□□□□ 0.7
SCAP-215ENST00000545718 PLEKHM2Q8IWE5 1019 aa19.41■□□□□ 0.7
SCAP-215ENST00000545718 DCTPP1Q9H773 170 aa19.41■□□□□ 0.7
SCAP-215ENST00000545718 KNDC1Q76NI1 1749 aa19.41■□□□□ 0.7
SCAP-215ENST00000545718 CEP85Q6P2H3 762 aa19.4■□□□□ 0.7
SCAP-215ENST00000545718 ANKRD44Q8N8A2 993 aa19.4■□□□□ 0.7
SCAP-215ENST00000545718 CD2BP2O95400 341 aaKnown RBP19.39■□□□□ 0.7
SCAP-215ENST00000545718 FLT4P35916 1363 aa19.38■□□□□ 0.69
SCAP-215ENST00000545718 ABTB2Q8N961 1025 aa19.38■□□□□ 0.69
SCAP-215ENST00000545718 STK31Q9BXU1 1019 aa19.38■□□□□ 0.69
SCAP-215ENST00000545718 TTC21AQ8NDW8 1320 aa19.38■□□□□ 0.69
SCAP-215ENST00000545718 KCNA6P17658 529 aa19.38■□□□□ 0.69
SCAP-215ENST00000545718 THEMISQ8N1K5 641 aaPredicted RBP19.38■□□□□ 0.69
SCAP-215ENST00000545718 RPAP2Q8IXW5 612 aaPredicted RBP19.37■□□□□ 0.69
SCAP-215ENST00000545718 USHBP1Q8N6Y0 703 aa19.37■□□□□ 0.69
SCAP-215ENST00000545718 TBX22Q9Y458 520 aa19.37■□□□□ 0.69
SCAP-215ENST00000545718 KIF2CQ99661 725 aa19.37■□□□□ 0.69
SCAP-215ENST00000545718 PTPRCP08575 1304 aa19.37■□□□□ 0.69
SCAP-215ENST00000545718 USP31Q70CQ4 1352 aa19.36■□□□□ 0.69
SCAP-215ENST00000545718 FKBP5Q13451 457 aaPredicted RBP19.36■□□□□ 0.69
SCAP-215ENST00000545718 TTC22Q5TAA0 569 aa19.36■□□□□ 0.69
SCAP-215ENST00000545718 GAS2L2Q8NHY3 880 aa19.36■□□□□ 0.69
SCAP-215ENST00000545718 RTL1A6NKG5 1358 aa19.36■□□□□ 0.69
SCAP-215ENST00000545718 TRAK2O60296 914 aa19.35■□□□□ 0.69
SCAP-215ENST00000545718 SBNO1A3KN83 1393 aa19.35■□□□□ 0.69
SCAP-215ENST00000545718 KIAA0232Q92628 1395 aa19.35■□□□□ 0.69
SCAP-215ENST00000545718 PEAK1Q9H792 1746 aa19.35■□□□□ 0.69
SCAP-215ENST00000545718 SNX21Q969T3 373 aa19.35■□□□□ 0.69
SCAP-215ENST00000545718 CRB1P82279 1406 aa19.35■□□□□ 0.69
SCAP-215ENST00000545718 RGS12O14924 1447 aa19.34■□□□□ 0.69
SCAP-215ENST00000545718 ARHGEF10O15013 1369 aa19.34■□□□□ 0.69
SCAP-215ENST00000545718 EXOC6BQ9Y2D4 811 aa19.34■□□□□ 0.69
SCAP-215ENST00000545718 ATP10DQ9P241 1426 aa19.33■□□□□ 0.69
SCAP-215ENST00000545718 SDSP20132 328 aa19.33■□□□□ 0.68
SCAP-215ENST00000545718 NRKQ7Z2Y5 1582 aa19.32■□□□□ 0.68
SCAP-215ENST00000545718 K7ELQ4 463 aaPredicted RBP19.32■□□□□ 0.68
SCAP-215ENST00000545718 HMMRO75330 724 aa19.32■□□□□ 0.68
SCAP-215ENST00000545718 TSHZ3Q63HK5 1081 aa19.32■□□□□ 0.68
SCAP-215ENST00000545718 RIMS1Q86UR5 1692 aaKnown RBP19.32■□□□□ 0.68
SCAP-215ENST00000545718 KIF24Q5T7B8 1368 aa19.32■□□□□ 0.68
SCAP-215ENST00000545718 GNAT3A8MTJ3 354 aa19.32■□□□□ 0.68
SCAP-215ENST00000545718 TNPO1Q92973 898 aaKnown RBP19.32■□□□□ 0.68
SCAP-215ENST00000545718 HOXC9P31274 260 aa19.31■□□□□ 0.68
SCAP-215ENST00000545718 SSH2Q76I76 1423 aa19.31■□□□□ 0.68
SCAP-215ENST00000545718 IGSF1Q8N6C5 1336 aa19.3■□□□□ 0.68
SCAP-215ENST00000545718 GOLGA6L3A6NEY3 463 aa19.3■□□□□ 0.68
SCAP-215ENST00000545718 CASC1Q6TDU7 716 aa19.3■□□□□ 0.68
SCAP-215ENST00000545718 CCT4P50991 539 aaKnown RBP19.3■□□□□ 0.68
SCAP-215ENST00000545718 CEP170BQ9Y4F5 1589 aaPredicted RBP19.3■□□□□ 0.68
SCAP-215ENST00000545718 FLIIQ13045 1269 aa19.29■□□□□ 0.68
SCAP-215ENST00000545718 L1TD1Q5T7N2 865 aaKnown RBP19.29■□□□□ 0.68
SCAP-215ENST00000545718 DDX11L8A8MPP1 907 aa19.29■□□□□ 0.68
SCAP-215ENST00000545718 GNAI2P04899 355 aa19.29■□□□□ 0.68
SCAP-215ENST00000545718 CCDC30Q5VVM6 783 aa19.28■□□□□ 0.68
SCAP-215ENST00000545718 EIF2S2P20042 333 aaKnown RBP19.28■□□□□ 0.68
SCAP-215ENST00000545718 RGPD8O14715 1765 aaPredicted RBP19.27■□□□□ 0.68
SCAP-215ENST00000545718 IL17REQ8NFR9 667 aa19.27■□□□□ 0.68
SCAP-215ENST00000545718 TOPAZ1Q8N9V7 1692 aa19.27■□□□□ 0.68
SCAP-215ENST00000545718 GBP4Q96PP9 640 aa19.27■□□□□ 0.68
SCAP-215ENST00000545718 DIP2AQ14689 1571 aa19.27■□□□□ 0.67
SCAP-215ENST00000545718 LMOD2Q6P5Q4 547 aa19.26■□□□□ 0.67
SCAP-215ENST00000545718 KDRP35968 1356 aa19.26■□□□□ 0.67
SCAP-215ENST00000545718 USP26Q9BXU7 913 aa19.25■□□□□ 0.67
SCAP-215ENST00000545718 SSFA2P28290 1259 aa19.25■□□□□ 0.67
SCAP-215ENST00000545718 DDIT3P35638 169 aa19.24■□□□□ 0.67
SCAP-215ENST00000545718 PANK2Q9BZ23 570 aa19.24■□□□□ 0.67
SCAP-215ENST00000545718 PNMA6EA0A0J9YXQ4 647 aa19.24■□□□□ 0.67
SCAP-215ENST00000545718 HDGFL1Q5TGJ6 251 aa19.24■□□□□ 0.67
SCAP-215ENST00000545718 TRIM6-TRIM34B2RNG4 842 aa19.23■□□□□ 0.67
SCAP-215ENST00000545718 RABEP1Q15276 862 aa19.23■□□□□ 0.67
SCAP-215ENST00000545718 TAF7Q15545 349 aaPredicted RBP19.23■□□□□ 0.67
SCAP-215ENST00000545718 PHF8Q9UPP1 1060 aa19.23■□□□□ 0.67
SCAP-215ENST00000545718 NCOA3Q9Y6Q9 1424 aa19.23■□□□□ 0.67
SCAP-215ENST00000545718 XRCC6P12956 609 aaKnown RBP eCLIP19.23■□□□□ 0.67
SCAP-215ENST00000545718 PDE1AP54750 535 aa19.23■□□□□ 0.67
SCAP-215ENST00000545718 XPCQ01831 940 aaPredicted RBP19.23■□□□□ 0.67
SCAP-215ENST00000545718 RAB3GAP1Q15042 981 aa19.23■□□□□ 0.67
SCAP-215ENST00000545718 ESCO1Q5FWF5 840 aa19.23■□□□□ 0.67
SCAP-215ENST00000545718 RILPL2Q969X0 211 aa19.23■□□□□ 0.67
SCAP-215ENST00000545718 CIZ1Q9ULV3 898 aaPredicted RBP19.23■□□□□ 0.67
SCAP-215ENST00000545718 LRRFIP2Q9Y608 721 aaKnown RBP19.23■□□□□ 0.67
SCAP-215ENST00000545718 SETD1BQ9UPS6 1966 aaKnown RBP19.23■□□□□ 0.67
SCAP-215ENST00000545718 PSME1Q06323 249 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms