RNA–Protein interactions for RNA: ENST00000545671.5

MMP17-210, Transcript of matrix metallopeptidase 17, human

TSL 3

Gene MMP17, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MMP17-210	ENST00000545671	COL3A1	P02461	1466 aa	Predicted RBP	33.37	■■■□□ 2.93
MMP17-210	ENST00000545671	SRCAP	Q6ZRS2	3230 aa		33.36	■■■□□ 2.93
MMP17-210	ENST00000545671	KDR	P35968	1356 aa		33.35	■■■□□ 2.93
MMP17-210	ENST00000545671	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	33.35	■■■□□ 2.93
MMP17-210	ENST00000545671	TRIM37	O94972	964 aa		33.34	■■■□□ 2.93
MMP17-210	ENST00000545671	BAG6	P46379	1132 aa		33.33	■■■□□ 2.93
MMP17-210	ENST00000545671	NHS	Q6T4R5	1651 aa		33.33	■■■□□ 2.93
MMP17-210	ENST00000545671	PPP2R1A	P30153	589 aa		33.32	■■■□□ 2.92
MMP17-210	ENST00000545671	PCDH11X	Q9BZA7	1347 aa		33.31	■■■□□ 2.92
MMP17-210	ENST00000545671	PCDH11Y	Q9BZA8	1340 aa		33.31	■■■□□ 2.92
MMP17-210	ENST00000545671	DEFB132	Q7Z7B7	95 aa		33.31	■■■□□ 2.92
MMP17-210	ENST00000545671	RGPD3	A6NKT7	1758 aa	Predicted RBP	33.31	■■■□□ 2.92
MMP17-210	ENST00000545671	RGPD4	Q7Z3J3	1758 aa		33.31	■■■□□ 2.92
MMP17-210	ENST00000545671	DIAPH1	O60610	1272 aa	Known RBP	33.3	■■■□□ 2.92
MMP17-210	ENST00000545671	CNGB1	Q14028	1251 aa	Predicted RBP	33.3	■■■□□ 2.92
MMP17-210	ENST00000545671	BCL11B	Q9C0K0	894 aa	Predicted RBP	33.3	■■■□□ 2.92
MMP17-210	ENST00000545671	ZNF316	A6NFI3	1004 aa	Predicted RBP	33.29	■■■□□ 2.92
MMP17-210	ENST00000545671	RALBP1	Q15311	655 aa		33.28	■■■□□ 2.92
MMP17-210	ENST00000545671	CFAP53	Q96M91	514 aa		33.28	■■■□□ 2.92
MMP17-210	ENST00000545671	DDX54	Q8TDD1	881 aa	Known RBP	33.27	■■■□□ 2.92
MMP17-210	ENST00000545671	SPG7	Q9UQ90	795 aa		33.27	■■■□□ 2.92
MMP17-210	ENST00000545671	APBA3	O96018	575 aa		33.22	■■■□□ 2.91
MMP17-210	ENST00000545671	SULT6B1	Q6IMI4	303 aa		33.22	■■■□□ 2.91
MMP17-210	ENST00000545671	KAT6B	Q8WYB5	2073 aa		33.22	■■■□□ 2.91
MMP17-210	ENST00000545671	DOT1L	Q8TEK3	1739 aa		33.22	■■■□□ 2.91
MMP17-210	ENST00000545671	AMOT	Q4VCS5	1084 aa		33.21	■■■□□ 2.91
MMP17-210	ENST00000545671	PLSCR1	O15162	318 aa		33.2	■■■□□ 2.91
MMP17-210	ENST00000545671	CYP27B1	O15528	508 aa		33.2	■■■□□ 2.91
MMP17-210	ENST00000545671	AEBP1	Q8IUX7	1158 aa		33.2	■■■□□ 2.91
MMP17-210	ENST00000545671	NKX1-1	Q15270	411 aa	Predicted RBP	33.19	■■■□□ 2.9
MMP17-210	ENST00000545671	CAMKK2	Q96RR4	588 aa		33.19	■■■□□ 2.9
MMP17-210	ENST00000545671	RREB1	Q92766	1687 aa		33.18	■■■□□ 2.9
MMP17-210	ENST00000545671	EN1	Q05925	392 aa	Predicted RBP	33.17	■■■□□ 2.9
MMP17-210	ENST00000545671	PLEKHO1	Q53GL0	409 aa	Predicted RBP	33.17	■■■□□ 2.9
MMP17-210	ENST00000545671	BTAF1	O14981	1849 aa		33.16	■■■□□ 2.9
MMP17-210	ENST00000545671	IFNL2	Q8IZJ0	200 aa		33.15	■■■□□ 2.9
MMP17-210	ENST00000545671	NUDC	Q9Y266	331 aa		33.15	■■■□□ 2.9
MMP17-210	ENST00000545671	KCNQ2	O43526	872 aa		33.14	■■■□□ 2.9
MMP17-210	ENST00000545671	ACSBG1	Q96GR2	724 aa		33.14	■■■□□ 2.9
MMP17-210	ENST00000545671	PHKG2	P15735	406 aa		33.13	■■■□□ 2.89
MMP17-210	ENST00000545671	PTF1A	Q7RTS3	328 aa		33.13	■■■□□ 2.89
MMP17-210	ENST00000545671	MYBBP1A	Q9BQG0	1328 aa	Known RBP	33.12	■■■□□ 2.89
MMP17-210	ENST00000545671	TOGARAM1	Q9Y4F4	1720 aa		33.11	■■■□□ 2.89
MMP17-210	ENST00000545671	EZH2	Q15910	746 aa	Known RBP	33.1	■■■□□ 2.89
MMP17-210	ENST00000545671	U2SURP	O15042	1029 aa	Known RBP	33.09	■■■□□ 2.89
MMP17-210	ENST00000545671	HSP90AB1	P08238	724 aa	Known RBP	33.09	■■■□□ 2.89
MMP17-210	ENST00000545671	HMOX1	P09601	288 aa		33.09	■■■□□ 2.89
MMP17-210	ENST00000545671	NUP188	Q5SRE5	1749 aa		33.08	■■■□□ 2.89
MMP17-210	ENST00000545671	PRKRIP1	Q9H875	184 aa	Predicted RBP	33.08	■■■□□ 2.89
MMP17-210	ENST00000545671	ITGB4	P16144	1822 aa		33.07	■■■□□ 2.89
MMP17-210	ENST00000545671	PRIM1	P49642	420 aa	Known RBP	33.07	■■■□□ 2.88
MMP17-210	ENST00000545671	ZNF530	Q6P9A1	599 aa	Predicted RBP	33.06	■■■□□ 2.88
MMP17-210	ENST00000545671	C1orf141	Q5JVX7	400 aa		33.03	■■■□□ 2.88
MMP17-210	ENST00000545671	DCAF5	Q96JK2	942 aa		33.03	■■■□□ 2.88
MMP17-210	ENST00000545671	SYTL4	Q96C24	671 aa	Predicted RBP	33.02	■■■□□ 2.88
MMP17-210	ENST00000545671	FCHSD2	O94868	740 aa		33.01	■■■□□ 2.87
MMP17-210	ENST00000545671	RSPH6A	Q9H0K4	717 aa		33.01	■■■□□ 2.87
MMP17-210	ENST00000545671	LY75	O60449	1722 aa		33	■■■□□ 2.87
MMP17-210	ENST00000545671	U2AF1L5	P0DN76	240 aa	Predicted RBP	32.99	■■■□□ 2.87
MMP17-210	ENST00000545671	U2AF1	Q01081	240 aa	Known RBP eCLIP	32.99	■■■□□ 2.87
MMP17-210	ENST00000545671	AKAP4	Q5JQC9	854 aa		32.99	■■■□□ 2.87
MMP17-210	ENST00000545671	KDM6A	O15550	1401 aa	Predicted RBP	32.99	■■■□□ 2.87
MMP17-210	ENST00000545671	ERVV-2	B6SEH9	535 aa		32.98	■■■□□ 2.87
MMP17-210	ENST00000545671	TXNRD1	Q16881	649 aa		32.98	■■■□□ 2.87
MMP17-210	ENST00000545671	SCN11A	Q9UI33	1791 aa		32.98	■■■□□ 2.87
MMP17-210	ENST00000545671	ADAMTS7	Q9UKP4	1686 aa		32.97	■■■□□ 2.87
MMP17-210	ENST00000545671	PROM2	Q8N271	834 aa		32.97	■■■□□ 2.87
MMP17-210	ENST00000545671	PSD	A5PKW4	1024 aa	Predicted RBP	32.96	■■■□□ 2.87
MMP17-210	ENST00000545671	GAS2L2	Q8NHY3	880 aa		32.96	■■■□□ 2.87
MMP17-210	ENST00000545671	PRKAR2B	P31323	418 aa		32.95	■■■□□ 2.87
MMP17-210	ENST00000545671	MTHFSD	Q2M296	383 aa	Known RBP	32.95	■■■□□ 2.87
MMP17-210	ENST00000545671	SLC27A3	Q5K4L6	730 aa		32.95	■■■□□ 2.87
MMP17-210	ENST00000545671	MPRIP	Q6WCQ1	1025 aa		32.93	■■■□□ 2.86
MMP17-210	ENST00000545671	TMOD3	Q9NYL9	352 aa		32.93	■■■□□ 2.86
MMP17-210	ENST00000545671	PAPPA	Q13219	1627 aa		32.92	■■■□□ 2.86
MMP17-210	ENST00000545671	PIGB	Q92521	554 aa		32.92	■■■□□ 2.86
MMP17-210	ENST00000545671	SMARCC1	Q92922	1105 aa	Predicted RBP	32.92	■■■□□ 2.86
MMP17-210	ENST00000545671	MRC1	P22897	1456 aa		32.92	■■■□□ 2.86
MMP17-210	ENST00000545671	VIRMA	Q69YN4	1812 aa	Known RBP	32.91	■■■□□ 2.86
MMP17-210	ENST00000545671	NBPF14	Q5TI25	921 aa		32.91	■■■□□ 2.86
MMP17-210	ENST00000545671	HMGB2	P26583	209 aa	Known RBP	32.9	■■■□□ 2.86
MMP17-210	ENST00000545671	PNN	Q9H307	717 aa	Known RBP	32.89	■■■□□ 2.86
MMP17-210	ENST00000545671	PALLD	Q8WX93	1383 aa		32.88	■■■□□ 2.85
MMP17-210	ENST00000545671	MAP3K5	Q99683	1374 aa		32.88	■■■□□ 2.85
MMP17-210	ENST00000545671	LRP5	O75197	1615 aa		32.87	■■■□□ 2.85
MMP17-210	ENST00000545671	PHACTR3	Q96KR7	559 aa		32.86	■■■□□ 2.85
MMP17-210	ENST00000545671	CABP4	P57796	275 aa		32.84	■■■□□ 2.85
MMP17-210	ENST00000545671	R3HDM1	Q15032	1099 aa	Known RBP	32.84	■■■□□ 2.85
MMP17-210	ENST00000545671	GNAT3	A8MTJ3	354 aa		32.83	■■■□□ 2.85
MMP17-210	ENST00000545671	RNMT	O43148	476 aa	Known RBP	32.83	■■■□□ 2.85
MMP17-210	ENST00000545671	PLEKHF1	Q96S99	279 aa		32.83	■■■□□ 2.85
MMP17-210	ENST00000545671	ZNF831	Q5JPB2	1677 aa		32.82	■■■□□ 2.84
MMP17-210	ENST00000545671	ANP32C	O43423	234 aa		32.82	■■■□□ 2.84
MMP17-210	ENST00000545671	NEFM	P07197	916 aa		32.82	■■■□□ 2.84
MMP17-210	ENST00000545671	LRRC4B	Q9NT99	713 aa		32.82	■■■□□ 2.84
MMP17-210	ENST00000545671	SLC52A2	Q9HAB3	445 aa		32.81	■■■□□ 2.84
MMP17-210	ENST00000545671	CCNL1	Q9UK58	526 aa	Predicted RBP	32.81	■■■□□ 2.84
MMP17-210	ENST00000545671	ANO8	Q9HCE9	1232 aa	Predicted RBP	32.8	■■■□□ 2.84
MMP17-210	ENST00000545671	ATG3	Q9NT62	314 aa		32.79	■■■□□ 2.84
MMP17-210	ENST00000545671	CEMIP	Q8WUJ3	1361 aa		32.79	■■■□□ 2.84

Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms