RNA–Protein interactions for RNA: ENST00000545638.2

NCKAP1L-202, Transcript of NCK associated protein 1 like, humanhuman

TSL 2 BASIC

Gene NCKAP1L, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1L-202ENST00000545638 CHMP4BQ9H444 224 aaKnown RBP11.19□□□□□ -0.62
NCKAP1L-202ENST00000545638 LGR6Q9HBX8 967 aa11.18□□□□□ -0.62
NCKAP1L-202ENST00000545638 C9orf78Q9NZ63 289 aaPredicted RBP11.18□□□□□ -0.62
NCKAP1L-202ENST00000545638 USP21Q9UK80 565 aa11.18□□□□□ -0.62
NCKAP1L-202ENST00000545638 PIP4K2AP48426 406 aaPredicted RBP11.18□□□□□ -0.62
NCKAP1L-202ENST00000545638 SSH1Q8WYL5 1049 aa11.18□□□□□ -0.62
NCKAP1L-202ENST00000545638 CFAP44Q96MT7 982 aa11.18□□□□□ -0.62
NCKAP1L-202ENST00000545638 NEXNQ0ZGT2 675 aa11.17□□□□□ -0.62
NCKAP1L-202ENST00000545638 DLC1Q96QB1 1528 aa11.17□□□□□ -0.62
NCKAP1L-202ENST00000545638 KIF16BQ96L93 1317 aa11.17□□□□□ -0.62
NCKAP1L-202ENST00000545638 FAM182BQ5T319 152 aa11.17□□□□□ -0.62
NCKAP1L-202ENST00000545638 IFT57Q9NWB7 429 aa11.17□□□□□ -0.62
NCKAP1L-202ENST00000545638 DIP2AQ14689 1571 aa11.17□□□□□ -0.62
NCKAP1L-202ENST00000545638 KIAA1210Q9ULL0 1709 aa11.17□□□□□ -0.62
NCKAP1L-202ENST00000545638 API5Q9BZZ5 524 aaKnown RBP11.16□□□□□ -0.62
NCKAP1L-202ENST00000545638 DDX58O95786 925 aaKnown RBP11.16□□□□□ -0.62
NCKAP1L-202ENST00000545638 AKAP4Q5JQC9 854 aa11.16□□□□□ -0.62
NCKAP1L-202ENST00000545638 ADAMTSL3P82987 1691 aa11.16□□□□□ -0.62
NCKAP1L-202ENST00000545638 CPSF1Q10570 1443 aaKnown RBP11.16□□□□□ -0.62
NCKAP1L-202ENST00000545638 TSPYL6Q8N831 410 aa11.15□□□□□ -0.62
NCKAP1L-202ENST00000545638 C8orf58Q8NAV2 365 aa11.15□□□□□ -0.62
NCKAP1L-202ENST00000545638 C1orf115Q9H7X2 142 aa11.15□□□□□ -0.62
NCKAP1L-202ENST00000545638 INSRP06213 1382 aa11.15□□□□□ -0.62
NCKAP1L-202ENST00000545638 NEURL4Q96JN8 1562 aa11.15□□□□□ -0.62
NCKAP1L-202ENST00000545638 HSPA1LP34931 641 aa11.15□□□□□ -0.62
NCKAP1L-202ENST00000545638 C20orf194Q5TEA3 1177 aa11.15□□□□□ -0.62
NCKAP1L-202ENST00000545638 ERBB3P21860 1342 aa11.15□□□□□ -0.62
NCKAP1L-202ENST00000545638 TRIM35Q9UPQ4 493 aa11.15□□□□□ -0.63
NCKAP1L-202ENST00000545638 CPS1P31327 1500 aa11.15□□□□□ -0.63
NCKAP1L-202ENST00000545638 F6X3S4 739 aa11.14□□□□□ -0.63
NCKAP1L-202ENST00000545638 RARSP54136 660 aaKnown RBP11.14□□□□□ -0.63
NCKAP1L-202ENST00000545638 TAF7LQ5H9L4 462 aa11.14□□□□□ -0.63
NCKAP1L-202ENST00000545638 RWDD1Q9H446 243 aaPredicted RBP11.14□□□□□ -0.63
NCKAP1L-202ENST00000545638 AATKQ6ZMQ8 1374 aa11.13□□□□□ -0.63
NCKAP1L-202ENST00000545638 ARHGEF28Q8N1W1 1705 aaKnown RBP11.13□□□□□ -0.63
NCKAP1L-202ENST00000545638 ATF7IPQ6VMQ6 1270 aa11.13□□□□□ -0.63
NCKAP1L-202ENST00000545638 DDX19BQ9UMR2 479 aa11.13□□□□□ -0.63
NCKAP1L-202ENST00000545638 MAP3K5Q99683 1374 aa11.12□□□□□ -0.63
NCKAP1L-202ENST00000545638 RNMTO43148 476 aaKnown RBP11.11□□□□□ -0.63
NCKAP1L-202ENST00000545638 FMNL2Q96PY5 1086 aa11.11□□□□□ -0.63
NCKAP1L-202ENST00000545638 TNS3Q68CZ2 1445 aa11.11□□□□□ -0.63
NCKAP1L-202ENST00000545638 PRIM1P49642 420 aaKnown RBP11.11□□□□□ -0.63
NCKAP1L-202ENST00000545638 SF3B2Q13435 895 aaKnown RBP11.11□□□□□ -0.63
NCKAP1L-202ENST00000545638 IL17REQ8NFR9 667 aa11.11□□□□□ -0.63
NCKAP1L-202ENST00000545638 NKTRP30414 1462 aaKnown RBP11.11□□□□□ -0.63
NCKAP1L-202ENST00000545638 BICDL1Q6ZP65 573 aa11.1□□□□□ -0.63
NCKAP1L-202ENST00000545638 DCAF5Q96JK2 942 aa11.1□□□□□ -0.63
NCKAP1L-202ENST00000545638 WDR17Q8IZU2 1322 aa11.1□□□□□ -0.63
NCKAP1L-202ENST00000545638 STARD3NLO95772 234 aa11.1□□□□□ -0.63
NCKAP1L-202ENST00000545638 PLEKHF1Q96S99 279 aa11.1□□□□□ -0.63
NCKAP1L-202ENST00000545638 QTRT2Q9H974 415 aaKnown RBP11.1□□□□□ -0.63
NCKAP1L-202ENST00000545638 MST1RQ04912 1400 aa11.1□□□□□ -0.63
NCKAP1L-202ENST00000545638 IGSF1Q8N6C5 1336 aa11.1□□□□□ -0.63
NCKAP1L-202ENST00000545638 UPF2Q9HAU5 1272 aaKnown RBP11.1□□□□□ -0.63
NCKAP1L-202ENST00000545638 KCNQ3O43525 872 aa11.09□□□□□ -0.63
NCKAP1L-202ENST00000545638 CCDC27Q2M243 656 aa11.09□□□□□ -0.63
NCKAP1L-202ENST00000545638 ANKRD45Q5TZF3 282 aa11.09□□□□□ -0.63
NCKAP1L-202ENST00000545638 TMEM57Q8N5G2 664 aa11.09□□□□□ -0.63
NCKAP1L-202ENST00000545638 ZBTB3Q9H5J0 574 aa11.09□□□□□ -0.63
NCKAP1L-202ENST00000545638 MED14O60244 1454 aa11.09□□□□□ -0.63
NCKAP1L-202ENST00000545638 PCDH11XQ9BZA7 1347 aa11.09□□□□□ -0.63
NCKAP1L-202ENST00000545638 PCDH11YQ9BZA8 1340 aa11.09□□□□□ -0.63
NCKAP1L-202ENST00000545638 HMMRO75330 724 aa11.09□□□□□ -0.63
NCKAP1L-202ENST00000545638 KLHL34Q8N239 644 aa11.09□□□□□ -0.63
NCKAP1L-202ENST00000545638 CCDC85AQ96PX6 553 aaPredicted RBP11.09□□□□□ -0.63
NCKAP1L-202ENST00000545638 TNNQ9UQP3 1299 aa11.09□□□□□ -0.63
NCKAP1L-202ENST00000545638 CDC42BPGQ6DT37 1551 aa11.09□□□□□ -0.63
NCKAP1L-202ENST00000545638 UBTFL1P0CB47 393 aaPredicted RBP11.09□□□□□ -0.63
NCKAP1L-202ENST00000545638 KIF6Q6ZMV9 814 aa11.08□□□□□ -0.64
NCKAP1L-202ENST00000545638 CHPF2Q9P2E5 772 aa11.08□□□□□ -0.64
NCKAP1L-202ENST00000545638 SOS2Q07890 1332 aaPredicted RBP11.08□□□□□ -0.64
NCKAP1L-202ENST00000545638 CARD10Q9BWT7 1032 aa11.08□□□□□ -0.64
NCKAP1L-202ENST00000545638 JARID2Q92833 1246 aaPredicted RBP11.07□□□□□ -0.64
NCKAP1L-202ENST00000545638 SNRPA1P09661 255 aaKnown RBP11.07□□□□□ -0.64
NCKAP1L-202ENST00000545638 CT47B1P0C2W7 299 aaPredicted RBP11.07□□□□□ -0.64
NCKAP1L-202ENST00000545638 TRIM27P14373 513 aa11.07□□□□□ -0.64
NCKAP1L-202ENST00000545638 PHKG2P15735 406 aa11.07□□□□□ -0.64
NCKAP1L-202ENST00000545638 FLIIQ13045 1269 aa11.07□□□□□ -0.64
NCKAP1L-202ENST00000545638 SRCIN1Q9C0H9 1055 aa11.07□□□□□ -0.64
NCKAP1L-202ENST00000545638 DBF4Q9UBU7 674 aaPredicted RBP11.07□□□□□ -0.64
NCKAP1L-202ENST00000545638 IFT172Q9UG01 1749 aa11.07□□□□□ -0.64
NCKAP1L-202ENST00000545638 CD163L1Q9NR16 1453 aa11.07□□□□□ -0.64
NCKAP1L-202ENST00000545638 LRRC7Q96NW7 1537 aa11.07□□□□□ -0.64
NCKAP1L-202ENST00000545638 PI4KAP2A4QPH2 592 aa11.07□□□□□ -0.64
NCKAP1L-202ENST00000545638 ATP6V1AP38606 617 aa11.07□□□□□ -0.64
NCKAP1L-202ENST00000545638 ZNF790Q6PG37 636 aa11.07□□□□□ -0.64
NCKAP1L-202ENST00000545638 PI4KAP1Q8N8J0 262 aa11.07□□□□□ -0.64
NCKAP1L-202ENST00000545638 IL16Q14005 1332 aa11.06□□□□□ -0.64
NCKAP1L-202ENST00000545638 ATP5J2-PTCD1G3V325 749 aa11.06□□□□□ -0.64
NCKAP1L-202ENST00000545638 VAMP4O75379 141 aa11.06□□□□□ -0.64
NCKAP1L-202ENST00000545638 PHF14O94880 888 aa11.06□□□□□ -0.64
NCKAP1L-202ENST00000545638 GPTP24298 496 aa11.06□□□□□ -0.64
NCKAP1L-202ENST00000545638 HDAC5Q9UQL6 1122 aa11.06□□□□□ -0.64
NCKAP1L-202ENST00000545638 USP31Q70CQ4 1352 aa11.06□□□□□ -0.64
NCKAP1L-202ENST00000545638 HTATSF1O43719 755 aaKnown RBP11.06□□□□□ -0.64
NCKAP1L-202ENST00000545638 PDE3AQ14432 1141 aa11.06□□□□□ -0.64
NCKAP1L-202ENST00000545638 GORABQ5T7V8 394 aa11.06□□□□□ -0.64
NCKAP1L-202ENST00000545638 ERICH6BQ5W0A0 696 aa11.06□□□□□ -0.64
NCKAP1L-202ENST00000545638 ZNF496Q96IT1 587 aaPredicted RBP11.05□□□□□ -0.64
NCKAP1L-202ENST00000545638 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms