RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 MCM4P33991 863 aa23.66■■□□□ 1.38
MSLN-202ENST00000545450 ALS2Q96Q42 1657 aa23.63■■□□□ 1.37
MSLN-202ENST00000545450 XRCC6P12956 609 aaKnown RBP eCLIP23.63■■□□□ 1.37
MSLN-202ENST00000545450 ZKSCAN2Q63HK3 967 aa23.63■■□□□ 1.37
MSLN-202ENST00000545450 KRT28Q7Z3Y7 464 aa23.63■■□□□ 1.37
MSLN-202ENST00000545450 THUMPD2Q9BTF0 503 aaKnown RBP23.63■■□□□ 1.37
MSLN-202ENST00000545450 CT47B1P0C2W7 299 aaPredicted RBP23.62■■□□□ 1.37
MSLN-202ENST00000545450 SLIT3O75094 1523 aa23.62■■□□□ 1.37
MSLN-202ENST00000545450 GOLGA6L3A6NEY3 463 aa23.62■■□□□ 1.37
MSLN-202ENST00000545450 RTL1A6NKG5 1358 aa23.62■■□□□ 1.37
MSLN-202ENST00000545450 MSH6P52701 1360 aa23.62■■□□□ 1.37
MSLN-202ENST00000545450 DZIP1LQ8IYY4 767 aaKnown RBP23.62■■□□□ 1.37
MSLN-202ENST00000545450 IGSF1Q8N6C5 1336 aa23.62■■□□□ 1.37
MSLN-202ENST00000545450 EYA1Q99502 592 aa23.62■■□□□ 1.37
MSLN-202ENST00000545450 C22orf23Q9BZE7 217 aa23.62■■□□□ 1.37
MSLN-202ENST00000545450 CHMP5Q9NZZ3 219 aa23.62■■□□□ 1.37
MSLN-202ENST00000545450 PHRF1Q9P1Y6 1649 aaKnown RBP23.62■■□□□ 1.37
MSLN-202ENST00000545450 KDRP35968 1356 aa23.61■■□□□ 1.37
MSLN-202ENST00000545450 ZNF335Q9H4Z2 1342 aaPredicted RBP23.61■■□□□ 1.37
MSLN-202ENST00000545450 CADPS2Q86UW7 1296 aa23.61■■□□□ 1.37
MSLN-202ENST00000545450 EXOSC9Q06265 439 aaKnown RBP23.6■■□□□ 1.37
MSLN-202ENST00000545450 HDAC1Q13547 482 aaPredicted RBP23.6■■□□□ 1.37
MSLN-202ENST00000545450 KCNH5Q8NCM2 988 aa23.59■■□□□ 1.37
MSLN-202ENST00000545450 DDX17Q92841 729 aaKnown RBP23.59■■□□□ 1.37
MSLN-202ENST00000545450 FAM83GA6ND36 823 aa23.58■■□□□ 1.37
MSLN-202ENST00000545450 LMOD2Q6P5Q4 547 aa23.58■■□□□ 1.37
MSLN-202ENST00000545450 FTSJ3Q8IY81 847 aaKnown RBP23.58■■□□□ 1.37
MSLN-202ENST00000545450 LMOD3Q0VAK6 560 aa23.57■■□□□ 1.36
MSLN-202ENST00000545450 SPRYD3Q8NCJ5 442 aa23.57■■□□□ 1.36
MSLN-202ENST00000545450 IP6K1Q92551 441 aa23.57■■□□□ 1.36
MSLN-202ENST00000545450 PLEKHG5O94827 1062 aa23.56■■□□□ 1.36
MSLN-202ENST00000545450 LTV1Q96GA3 475 aaPredicted RBP23.56■■□□□ 1.36
MSLN-202ENST00000545450 GCP02774 474 aa23.55■■□□□ 1.36
MSLN-202ENST00000545450 MFAP1P55081 439 aaKnown RBP23.55■■□□□ 1.36
MSLN-202ENST00000545450 DCTN1Q14203 1278 aa23.55■■□□□ 1.36
MSLN-202ENST00000545450 RGPD2P0DJD1 1756 aa23.55■■□□□ 1.36
MSLN-202ENST00000545450 TRAK2O60296 914 aa23.55■■□□□ 1.36
MSLN-202ENST00000545450 CALD1Q05682 793 aaKnown RBP23.54■■□□□ 1.36
MSLN-202ENST00000545450 MED1Q15648 1581 aaPredicted RBP23.54■■□□□ 1.36
MSLN-202ENST00000545450 ZNF853P0CG23 659 aa23.53■■□□□ 1.36
MSLN-202ENST00000545450 TRIM27P14373 513 aa23.53■■□□□ 1.36
MSLN-202ENST00000545450 SMC5Q8IY18 1101 aa23.53■■□□□ 1.36
MSLN-202ENST00000545450 IFT57Q9NWB7 429 aa23.53■■□□□ 1.36
MSLN-202ENST00000545450 DDX19BQ9UMR2 479 aa23.53■■□□□ 1.36
MSLN-202ENST00000545450 ZBTB7CA1YPR0 619 aa23.52■■□□□ 1.36
MSLN-202ENST00000545450 GZF1Q9H116 711 aaPredicted RBP23.52■■□□□ 1.36
MSLN-202ENST00000545450 SMC4Q9NTJ3 1288 aa23.52■■□□□ 1.36
MSLN-202ENST00000545450 ARHGEF25Q86VW2 580 aa23.51■■□□□ 1.35
MSLN-202ENST00000545450 PXDNQ92626 1479 aa23.51■■□□□ 1.35
MSLN-202ENST00000545450 GNAI1P63096 354 aa23.51■■□□□ 1.35
MSLN-202ENST00000545450 MTHFSDQ2M296 383 aaKnown RBP23.51■■□□□ 1.35
MSLN-202ENST00000545450 PANK2Q9BZ23 570 aa23.51■■□□□ 1.35
MSLN-202ENST00000545450 NPHP3Q7Z494 1330 aa23.51■■□□□ 1.35
MSLN-202ENST00000545450 MBIPQ9NS73 344 aa23.5■■□□□ 1.35
MSLN-202ENST00000545450 RGPD5Q99666 1765 aa23.5■■□□□ 1.35
MSLN-202ENST00000545450 DDIT3P35638 169 aa23.5■■□□□ 1.35
MSLN-202ENST00000545450 MRE11P49959 708 aa23.5■■□□□ 1.35
MSLN-202ENST00000545450 ATF7IPQ6VMQ6 1270 aa23.5■■□□□ 1.35
MSLN-202ENST00000545450 CLCN1P35523 988 aa23.49■■□□□ 1.35
MSLN-202ENST00000545450 HSCBQ8IWL3 235 aa23.49■■□□□ 1.35
MSLN-202ENST00000545450 SSH1Q8WYL5 1049 aa23.49■■□□□ 1.35
MSLN-202ENST00000545450 CFAP44Q96MT7 982 aa23.49■■□□□ 1.35
MSLN-202ENST00000545450 MCM10Q7L590 875 aa23.48■■□□□ 1.35
MSLN-202ENST00000545450 USHBP1Q8N6Y0 703 aa23.48■■□□□ 1.35
MSLN-202ENST00000545450 ARXQ96QS3 562 aa23.48■■□□□ 1.35
MSLN-202ENST00000545450 DDX11L8A8MPP1 907 aa23.48■■□□□ 1.35
MSLN-202ENST00000545450 RBM25P49756 843 aaKnown RBP23.47■■□□□ 1.35
MSLN-202ENST00000545450 BRINP3Q76B58 766 aa23.47■■□□□ 1.35
MSLN-202ENST00000545450 ITPRIPQ8IWB1 547 aa23.47■■□□□ 1.35
MSLN-202ENST00000545450 TNS3Q68CZ2 1445 aa23.47■■□□□ 1.35
MSLN-202ENST00000545450 CRYBG1Q9Y4K1 1723 aa23.47■■□□□ 1.35
MSLN-202ENST00000545450 SNX21Q969T3 373 aa23.46■■□□□ 1.35
MSLN-202ENST00000545450 ISY1Q9ULR0 285 aaKnown RBP23.46■■□□□ 1.35
MSLN-202ENST00000545450 NBPF6Q5VWK0 638 aa23.45■■□□□ 1.35
MSLN-202ENST00000545450 NBPF4Q96M43 638 aa23.45■■□□□ 1.35
MSLN-202ENST00000545450 ZBTB40Q9NUA8 1239 aa23.45■■□□□ 1.35
MSLN-202ENST00000545450 GAS2L2Q8NHY3 880 aa23.44■■□□□ 1.34
MSLN-202ENST00000545450 TSPYL6Q8N831 410 aa23.44■■□□□ 1.34
MSLN-202ENST00000545450 NOB1Q9ULX3 412 aaKnown RBP23.44■■□□□ 1.34
MSLN-202ENST00000545450 CRB1P82279 1406 aa23.43■■□□□ 1.34
MSLN-202ENST00000545450 LRRC59Q96AG4 307 aaKnown RBP23.43■■□□□ 1.34
MSLN-202ENST00000545450 LRRC37A3O60309 1634 aa23.43■■□□□ 1.34
MSLN-202ENST00000545450 NUCB1Q02818 461 aa23.42■■□□□ 1.34
MSLN-202ENST00000545450 TMEM57Q8N5G2 664 aa23.42■■□□□ 1.34
MSLN-202ENST00000545450 AXIN2Q9Y2T1 843 aa23.42■■□□□ 1.34
MSLN-202ENST00000545450 SPATA31A3Q5VYP0 1347 aa23.42■■□□□ 1.34
MSLN-202ENST00000545450 SLAIN2Q9P270 581 aa23.42■■□□□ 1.34
MSLN-202ENST00000545450 CAMTA1Q9Y6Y1 1673 aa23.42■■□□□ 1.34
MSLN-202ENST00000545450 VAMP4O75379 141 aa23.41■■□□□ 1.34
MSLN-202ENST00000545450 ZC3H6P61129 1189 aaKnown RBP23.41■■□□□ 1.34
MSLN-202ENST00000545450 GRPEL1Q9HAV7 217 aa23.41■■□□□ 1.34
MSLN-202ENST00000545450 ALDH1L2Q3SY69 923 aa23.4■■□□□ 1.34
MSLN-202ENST00000545450 CIZ1Q9ULV3 898 aaPredicted RBP23.4■■□□□ 1.34
MSLN-202ENST00000545450 COL18A1P39060 1754 aa23.4■■□□□ 1.34
MSLN-202ENST00000545450 CHL1O00533 1208 aa23.4■■□□□ 1.34
MSLN-202ENST00000545450 C8orf58Q8NAV2 365 aa23.4■■□□□ 1.34
MSLN-202ENST00000545450 CABLES1Q8TDN4 633 aa23.4■■□□□ 1.34
MSLN-202ENST00000545450 ANKRD24Q8TF21 1146 aa23.4■■□□□ 1.34
MSLN-202ENST00000545450 NCAPD2Q15021 1401 aa23.39■■□□□ 1.34
MSLN-202ENST00000545450 RTF1Q92541 710 aaKnown RBP23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms