RNA–Protein interactions for RNA: ENST00000544105.5

LDHC-208, Transcript of lactate dehydrogenase C, humanhuman

TSL 5 BASIC

Gene LDHC, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-208ENST00000544105 PEAK1Q9H792 1746 aa13.39□□□□□ -0.27
LDHC-208ENST00000544105 SPATA31A3Q5VYP0 1347 aa13.39□□□□□ -0.27
LDHC-208ENST00000544105 IGSF1Q8N6C5 1336 aa13.39□□□□□ -0.27
LDHC-208ENST00000544105 GNAI1P63096 354 aa13.38□□□□□ -0.27
LDHC-208ENST00000544105 RTF1Q92541 710 aaKnown RBP13.38□□□□□ -0.27
LDHC-208ENST00000544105 TNS3Q68CZ2 1445 aa13.38□□□□□ -0.27
LDHC-208ENST00000544105 TRPM3Q9HCF6 1732 aaPredicted RBP13.37□□□□□ -0.27
LDHC-208ENST00000544105 HAP1P54257 671 aaPredicted RBP13.37□□□□□ -0.27
LDHC-208ENST00000544105 AEBP1Q8IUX7 1158 aa13.37□□□□□ -0.27
LDHC-208ENST00000544105 DDX17Q92841 729 aaKnown RBP13.37□□□□□ -0.27
LDHC-208ENST00000544105 LAS1LQ9Y4W2 734 aaKnown RBP13.37□□□□□ -0.27
LDHC-208ENST00000544105 SLIT3O75094 1523 aa13.37□□□□□ -0.27
LDHC-208ENST00000544105 XIRP1Q702N8 1843 aaKnown RBP13.36□□□□□ -0.27
LDHC-208ENST00000544105 NFAT5O94916 1531 aa13.36□□□□□ -0.27
LDHC-208ENST00000544105 CANXP27824 592 aaKnown RBP13.36□□□□□ -0.27
LDHC-208ENST00000544105 HTATSF1O43719 755 aaKnown RBP13.35□□□□□ -0.27
LDHC-208ENST00000544105 ZC3H6P61129 1189 aaKnown RBP13.35□□□□□ -0.27
LDHC-208ENST00000544105 IFT57Q9NWB7 429 aa13.35□□□□□ -0.27
LDHC-208ENST00000544105 MARF1Q9Y4F3 1742 aaKnown RBP13.35□□□□□ -0.27
LDHC-208ENST00000544105 KDRP35968 1356 aa13.34□□□□□ -0.27
LDHC-208ENST00000544105 PROM2Q8N271 834 aa13.34□□□□□ -0.27
LDHC-208ENST00000544105 ANKRD24Q8TF21 1146 aa13.34□□□□□ -0.27
LDHC-208ENST00000544105 PXDNQ92626 1479 aa13.34□□□□□ -0.27
LDHC-208ENST00000544105 SOS2Q07890 1332 aaPredicted RBP13.34□□□□□ -0.27
LDHC-208ENST00000544105 FANCIQ9NVI1 1328 aa13.34□□□□□ -0.27
LDHC-208ENST00000544105 LTN1O94822 1766 aa13.33□□□□□ -0.28
LDHC-208ENST00000544105 MS4A3Q96HJ5 214 aa13.33□□□□□ -0.28
LDHC-208ENST00000544105 ALS2Q96Q42 1657 aa13.33□□□□□ -0.28
LDHC-208ENST00000544105 RGPD1P0DJD0 1748 aa13.33□□□□□ -0.28
LDHC-208ENST00000544105 CSB-PGBD3P0DP91 1061 aa13.32□□□□□ -0.28
LDHC-208ENST00000544105 MS4A1P11836 297 aa13.32□□□□□ -0.28
LDHC-208ENST00000544105 EXOSC9Q06265 439 aaKnown RBP13.32□□□□□ -0.28
LDHC-208ENST00000544105 PLEKHO1Q53GL0 409 aaPredicted RBP13.32□□□□□ -0.28
LDHC-208ENST00000544105 TSR2Q969E8 191 aaKnown RBP13.32□□□□□ -0.28
LDHC-208ENST00000544105 ZNF428Q96B54 188 aa13.32□□□□□ -0.28
LDHC-208ENST00000544105 CFAP44Q96MT7 982 aa13.32□□□□□ -0.28
LDHC-208ENST00000544105 PHRF1Q9P1Y6 1649 aaKnown RBP13.31□□□□□ -0.28
LDHC-208ENST00000544105 GNAT3A8MTJ3 354 aa13.31□□□□□ -0.28
LDHC-208ENST00000544105 MTHFSDQ2M296 383 aaKnown RBP13.31□□□□□ -0.28
LDHC-208ENST00000544105 AMOTQ4VCS5 1084 aa13.31□□□□□ -0.28
LDHC-208ENST00000544105 NBPF6Q5VWK0 638 aa13.31□□□□□ -0.28
LDHC-208ENST00000544105 CCDC136Q96JN2 1154 aa13.31□□□□□ -0.28
LDHC-208ENST00000544105 NBPF4Q96M43 638 aa13.31□□□□□ -0.28
LDHC-208ENST00000544105 PLIN1O60240 522 aa13.3□□□□□ -0.28
LDHC-208ENST00000544105 RARSP54136 660 aaKnown RBP13.3□□□□□ -0.28
LDHC-208ENST00000544105 CABLES1Q8TDN4 633 aa13.3□□□□□ -0.28
LDHC-208ENST00000544105 LRRC59Q96AG4 307 aaKnown RBP13.3□□□□□ -0.28
LDHC-208ENST00000544105 THUMPD2Q9BTF0 503 aaKnown RBP13.3□□□□□ -0.28
LDHC-208ENST00000544105 TOM1O60784 492 aa13.29□□□□□ -0.28
LDHC-208ENST00000544105 BCAR3O75815 825 aa13.29□□□□□ -0.28
LDHC-208ENST00000544105 PDE3AQ14432 1141 aa13.29□□□□□ -0.28
LDHC-208ENST00000544105 USHBP1Q8N6Y0 703 aa13.29□□□□□ -0.28
LDHC-208ENST00000544105 CPDO75976 1380 aa13.29□□□□□ -0.28
LDHC-208ENST00000544105 FAM83GA6ND36 823 aa13.28□□□□□ -0.28
LDHC-208ENST00000544105 IPO8O15397 1037 aaKnown RBP13.28□□□□□ -0.28
LDHC-208ENST00000544105 ZNF853P0CG23 659 aa13.28□□□□□ -0.28
LDHC-208ENST00000544105 DCTN1Q14203 1278 aa13.28□□□□□ -0.28
LDHC-208ENST00000544105 C1orf141Q5JVX7 400 aa13.28□□□□□ -0.28
LDHC-208ENST00000544105 MCM10Q7L590 875 aa13.28□□□□□ -0.28
LDHC-208ENST00000544105 RAPGEF4Q8WZA2 1011 aa13.28□□□□□ -0.28
LDHC-208ENST00000544105 FRAT1Q92837 279 aaPredicted RBP13.28□□□□□ -0.28
LDHC-208ENST00000544105 PRDM11Q9NQV5 511 aa13.28□□□□□ -0.28
LDHC-208ENST00000544105 NLRP2Q9NX02 1062 aa13.28□□□□□ -0.28
LDHC-208ENST00000544105 MED1Q15648 1581 aaPredicted RBP13.28□□□□□ -0.28
LDHC-208ENST00000544105 ALDH1L2Q3SY69 923 aa13.27□□□□□ -0.29
LDHC-208ENST00000544105 PLCD3Q8N3E9 789 aa13.27□□□□□ -0.29
LDHC-208ENST00000544105 EXOC6Q8TAG9 804 aa13.27□□□□□ -0.29
LDHC-208ENST00000544105 MBIPQ9NS73 344 aa13.27□□□□□ -0.29
LDHC-208ENST00000544105 SMC4Q9NTJ3 1288 aa13.27□□□□□ -0.29
LDHC-208ENST00000544105 AXIN2Q9Y2T1 843 aa13.27□□□□□ -0.29
LDHC-208ENST00000544105 ABCC6O95255 1503 aa13.26□□□□□ -0.29
LDHC-208ENST00000544105 ERBB3P21860 1342 aa13.26□□□□□ -0.29
LDHC-208ENST00000544105 ZKSCAN2Q63HK3 967 aa13.26□□□□□ -0.29
LDHC-208ENST00000544105 CRBNQ96SW2 442 aa13.26□□□□□ -0.29
LDHC-208ENST00000544105 MAP3K5Q99683 1374 aa13.26□□□□□ -0.29
LDHC-208ENST00000544105 KIAA0232Q92628 1395 aa13.25□□□□□ -0.29
LDHC-208ENST00000544105 CHL1O00533 1208 aa13.25□□□□□ -0.29
LDHC-208ENST00000544105 TATP17735 454 aaPredicted RBP13.25□□□□□ -0.29
LDHC-208ENST00000544105 EVA1CP58658 441 aa13.25□□□□□ -0.29
LDHC-208ENST00000544105 AAMPQ13685 434 aa13.25□□□□□ -0.29
LDHC-208ENST00000544105 CHRNA2Q15822 529 aa13.25□□□□□ -0.29
LDHC-208ENST00000544105 AKAP4Q5JQC9 854 aa13.25□□□□□ -0.29
LDHC-208ENST00000544105 B4GALNT3Q6L9W6 998 aa13.25□□□□□ -0.29
LDHC-208ENST00000544105 BABAM1Q9NWV8 329 aa13.25□□□□□ -0.29
LDHC-208ENST00000544105 METRNQ9UJH8 293 aa13.25□□□□□ -0.29
LDHC-208ENST00000544105 KIF16BQ96L93 1317 aa13.24□□□□□ -0.29
LDHC-208ENST00000544105 TWISTNBQ3B726 338 aaPredicted RBP13.24□□□□□ -0.29
LDHC-208ENST00000544105 ZNF530Q6P9A1 599 aaPredicted RBP13.24□□□□□ -0.29
LDHC-208ENST00000544105 SLC39A7Q92504 469 aa13.24□□□□□ -0.29
LDHC-208ENST00000544105 CHMP4AQ9BY43 222 aa13.24□□□□□ -0.29
LDHC-208ENST00000544105 TSPYL4Q9UJ04 414 aa13.24□□□□□ -0.29
LDHC-208ENST00000544105 SPG7Q9UQ90 795 aa13.24□□□□□ -0.29
LDHC-208ENST00000544105 LTBP4Q8N2S1 1624 aa13.24□□□□□ -0.29
LDHC-208ENST00000544105 DLG5Q8TDM6 1919 aa13.23□□□□□ -0.29
LDHC-208ENST00000544105 VAMP4O75379 141 aa13.23□□□□□ -0.29
LDHC-208ENST00000544105 TAF7Q15545 349 aaPredicted RBP13.23□□□□□ -0.29
LDHC-208ENST00000544105 FTSJ3Q8IY81 847 aaKnown RBP13.23□□□□□ -0.29
LDHC-208ENST00000544105 BCL2L13Q9BXK5 485 aa13.23□□□□□ -0.29
LDHC-208ENST00000544105 NHSL1Q5SYE7 1610 aa13.22□□□□□ -0.29
LDHC-208ENST00000544105 TEFQ10587 303 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms