RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 FAM182BQ5T319 152 aa24.14■■□□□ 1.45
TSFM-208ENST00000543727 USHBP1Q8N6Y0 703 aa24.14■■□□□ 1.45
TSFM-208ENST00000543727 ZCRB1Q8TBF4 217 aaKnown RBP24.14■■□□□ 1.45
TSFM-208ENST00000543727 ZNF316A6NFI3 1004 aaPredicted RBP24.13■■□□□ 1.45
TSFM-208ENST00000543727 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.13■■□□□ 1.45
TSFM-208ENST00000543727 KDRP35968 1356 aa24.13■■□□□ 1.45
TSFM-208ENST00000543727 IL13P35225 146 aa24.12■■□□□ 1.45
TSFM-208ENST00000543727 CFAP53Q96M91 514 aa24.12■■□□□ 1.45
TSFM-208ENST00000543727 PCDH11XQ9BZA7 1347 aa24.11■■□□□ 1.45
TSFM-208ENST00000543727 PCDH11YQ9BZA8 1340 aa24.11■■□□□ 1.45
TSFM-208ENST00000543727 DIAPH1O60610 1272 aaKnown RBP24.11■■□□□ 1.45
TSFM-208ENST00000543727 RALBP1Q15311 655 aa24.11■■□□□ 1.45
TSFM-208ENST00000543727 DOT1LQ8TEK3 1739 aa24.1■■□□□ 1.45
TSFM-208ENST00000543727 PPP2R1AP30153 589 aa24.1■■□□□ 1.45
TSFM-208ENST00000543727 BAG6P46379 1132 aa24.09■■□□□ 1.45
TSFM-208ENST00000543727 CNGB1Q14028 1251 aaPredicted RBP24.09■■□□□ 1.45
TSFM-208ENST00000543727 SPG7Q9UQ90 795 aa24.08■■□□□ 1.45
TSFM-208ENST00000543727 KAT6BQ8WYB5 2073 aa24.07■■□□□ 1.44
TSFM-208ENST00000543727 TRIM37O94972 964 aa24.07■■□□□ 1.44
TSFM-208ENST00000543727 RREB1Q92766 1687 aa24.06■■□□□ 1.44
TSFM-208ENST00000543727 BTAF1O14981 1849 aa24.06■■□□□ 1.44
TSFM-208ENST00000543727 BCL11BQ9C0K0 894 aaPredicted RBP24.06■■□□□ 1.44
TSFM-208ENST00000543727 DDX54Q8TDD1 881 aaKnown RBP24.05■■□□□ 1.44
TSFM-208ENST00000543727 AMOTQ4VCS5 1084 aa24.03■■□□□ 1.44
TSFM-208ENST00000543727 SULT6B1Q6IMI4 303 aa24.03■■□□□ 1.44
TSFM-208ENST00000543727 NUDCQ9Y266 331 aa24.02■■□□□ 1.44
TSFM-208ENST00000543727 ITGB4P16144 1822 aa24.02■■□□□ 1.44
TSFM-208ENST00000543727 TOGARAM1Q9Y4F4 1720 aa24.01■■□□□ 1.43
TSFM-208ENST00000543727 PLEKHO1Q53GL0 409 aaPredicted RBP24■■□□□ 1.43
TSFM-208ENST00000543727 MYBBP1AQ9BQG0 1328 aaKnown RBP24■■□□□ 1.43
TSFM-208ENST00000543727 PLSCR1O15162 318 aa23.99■■□□□ 1.43
TSFM-208ENST00000543727 APBA3O96018 575 aa23.99■■□□□ 1.43
TSFM-208ENST00000543727 NKX1-1Q15270 411 aaPredicted RBP23.99■■□□□ 1.43
TSFM-208ENST00000543727 VIRMAQ69YN4 1812 aaKnown RBP23.98■■□□□ 1.43
TSFM-208ENST00000543727 CYP27B1O15528 508 aa23.98■■□□□ 1.43
TSFM-208ENST00000543727 AEBP1Q8IUX7 1158 aa23.98■■□□□ 1.43
TSFM-208ENST00000543727 IFNL2Q8IZJ0 200 aa23.98■■□□□ 1.43
TSFM-208ENST00000543727 NUP188Q5SRE5 1749 aa23.98■■□□□ 1.43
TSFM-208ENST00000543727 DEFB132Q7Z7B7 95 aa23.97■■□□□ 1.43
TSFM-208ENST00000543727 HSP90AB1P08238 724 aaKnown RBP23.96■■□□□ 1.43
TSFM-208ENST00000543727 SCN11AQ9UI33 1791 aa23.96■■□□□ 1.43
TSFM-208ENST00000543727 U2SURPO15042 1029 aaKnown RBP23.95■■□□□ 1.42
TSFM-208ENST00000543727 CAMKK2Q96RR4 588 aa23.95■■□□□ 1.42
TSFM-208ENST00000543727 PRKRIP1Q9H875 184 aaPredicted RBP23.95■■□□□ 1.42
TSFM-208ENST00000543727 LY75O60449 1722 aa23.95■■□□□ 1.42
TSFM-208ENST00000543727 PHKG2P15735 406 aa23.94■■□□□ 1.42
TSFM-208ENST00000543727 HMOX1P09601 288 aa23.93■■□□□ 1.42
TSFM-208ENST00000543727 EN1Q05925 392 aaPredicted RBP23.93■■□□□ 1.42
TSFM-208ENST00000543727 ACSBG1Q96GR2 724 aa23.93■■□□□ 1.42
TSFM-208ENST00000543727 KCNQ2O43526 872 aa23.92■■□□□ 1.42
TSFM-208ENST00000543727 ADAMTS7Q9UKP4 1686 aa23.92■■□□□ 1.42
TSFM-208ENST00000543727 C1orf141Q5JVX7 400 aa23.91■■□□□ 1.42
TSFM-208ENST00000543727 ZNF530Q6P9A1 599 aaPredicted RBP23.91■■□□□ 1.42
TSFM-208ENST00000543727 PRIM1P49642 420 aaKnown RBP23.9■■□□□ 1.42
TSFM-208ENST00000543727 DCAF5Q96JK2 942 aa23.9■■□□□ 1.42
TSFM-208ENST00000543727 FCHSD2O94868 740 aa23.89■■□□□ 1.41
TSFM-208ENST00000543727 EZH2Q15910 746 aaKnown RBP23.89■■□□□ 1.41
TSFM-208ENST00000543727 U2AF1L5P0DN76 240 aaPredicted RBP23.88■■□□□ 1.41
TSFM-208ENST00000543727 U2AF1Q01081 240 aaKnown RBP eCLIP23.88■■□□□ 1.41
TSFM-208ENST00000543727 PTF1AQ7RTS3 328 aa23.88■■□□□ 1.41
TSFM-208ENST00000543727 SYTL4Q96C24 671 aaPredicted RBP23.88■■□□□ 1.41
TSFM-208ENST00000543727 AKAP4Q5JQC9 854 aa23.87■■□□□ 1.41
TSFM-208ENST00000543727 RSPH6AQ9H0K4 717 aa23.87■■□□□ 1.41
TSFM-208ENST00000543727 ERVV-2B6SEH9 535 aa23.86■■□□□ 1.41
TSFM-208ENST00000543727 HMGB2P26583 209 aaKnown RBP23.86■■□□□ 1.41
TSFM-208ENST00000543727 PNNQ9H307 717 aaKnown RBP23.86■■□□□ 1.41
TSFM-208ENST00000543727 KDM6AO15550 1401 aaPredicted RBP23.85■■□□□ 1.41
TSFM-208ENST00000543727 GAS2L2Q8NHY3 880 aa23.85■■□□□ 1.41
TSFM-208ENST00000543727 MRC1P22897 1456 aa23.84■■□□□ 1.41
TSFM-208ENST00000543727 ZNF831Q5JPB2 1677 aa23.83■■□□□ 1.41
TSFM-208ENST00000543727 PRKAR2BP31323 418 aa23.83■■□□□ 1.41
TSFM-208ENST00000543727 SLC27A3Q5K4L6 730 aa23.83■■□□□ 1.41
TSFM-208ENST00000543727 TMOD3Q9NYL9 352 aa23.83■■□□□ 1.41
TSFM-208ENST00000543727 PAPPAQ13219 1627 aa23.83■■□□□ 1.41
TSFM-208ENST00000543727 SMARCC1Q92922 1105 aaPredicted RBP23.82■■□□□ 1.4
TSFM-208ENST00000543727 NEFMP07197 916 aa23.81■■□□□ 1.4
TSFM-208ENST00000543727 TXNRD1Q16881 649 aa23.81■■□□□ 1.4
TSFM-208ENST00000543727 MTHFSDQ2M296 383 aaKnown RBP23.81■■□□□ 1.4
TSFM-208ENST00000543727 MPRIPQ6WCQ1 1025 aa23.81■■□□□ 1.4
TSFM-208ENST00000543727 DLG5Q8TDM6 1919 aa23.8■■□□□ 1.4
TSFM-208ENST00000543727 MAP3K5Q99683 1374 aa23.8■■□□□ 1.4
TSFM-208ENST00000543727 TAF1LQ8IZX4 1826 aa23.8■■□□□ 1.4
TSFM-208ENST00000543727 ANP32CO43423 234 aa23.8■■□□□ 1.4
TSFM-208ENST00000543727 QSER1Q2KHR3 1735 aa23.8■■□□□ 1.4
TSFM-208ENST00000543727 NBPF14Q5TI25 921 aa23.8■■□□□ 1.4
TSFM-208ENST00000543727 C5P01031 1676 aa23.79■■□□□ 1.4
TSFM-208ENST00000543727 SIPA1L3O60292 1781 aaPredicted RBP23.79■■□□□ 1.4
TSFM-208ENST00000543727 PROM2Q8N271 834 aa23.78■■□□□ 1.4
TSFM-208ENST00000543727 PIGBQ92521 554 aa23.78■■□□□ 1.4
TSFM-208ENST00000543727 PALLDQ8WX93 1383 aa23.77■■□□□ 1.4
TSFM-208ENST00000543727 CICQ96RK0 1608 aaPredicted RBP23.77■■□□□ 1.4
TSFM-208ENST00000543727 GNAT3A8MTJ3 354 aa23.76■■□□□ 1.39
TSFM-208ENST00000543727 CABP4P57796 275 aa23.76■■□□□ 1.39
TSFM-208ENST00000543727 WDR43Q15061 677 aaKnown RBP eCLIP23.74■■□□□ 1.39
TSFM-208ENST00000543727 PHACTR3Q96KR7 559 aa23.74■■□□□ 1.39
TSFM-208ENST00000543727 PLEKHF1Q96S99 279 aa23.74■■□□□ 1.39
TSFM-208ENST00000543727 RNMTO43148 476 aaKnown RBP23.73■■□□□ 1.39
TSFM-208ENST00000543727 MAPK8IP3Q9UPT6 1336 aa23.73■■□□□ 1.39
TSFM-208ENST00000543727 HTATSF1O43719 755 aaKnown RBP23.72■■□□□ 1.39
TSFM-208ENST00000543727 SLC52A2Q9HAB3 445 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms