RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 API5Q9BZZ5 524 aaKnown RBP17.57■□□□□ 0.4
MSH2-206ENST00000543555 KDRP35968 1356 aa17.56■□□□□ 0.4
MSH2-206ENST00000543555 STRCP1A6NGW2 1772 aa17.56■□□□□ 0.4
MSH2-206ENST00000543555 AMPHP49418 695 aa17.56■□□□□ 0.4
MSH2-206ENST00000543555 HAP1P54257 671 aaPredicted RBP17.55■□□□□ 0.4
MSH2-206ENST00000543555 NLRP6P59044 892 aa17.55■□□□□ 0.4
MSH2-206ENST00000543555 UPF2Q9HAU5 1272 aaKnown RBP17.55■□□□□ 0.4
MSH2-206ENST00000543555 NUCB1Q02818 461 aa17.55■□□□□ 0.4
MSH2-206ENST00000543555 LMOD2Q6P5Q4 547 aa17.55■□□□□ 0.4
MSH2-206ENST00000543555 USP35Q9P2H5 1018 aa17.55■□□□□ 0.4
MSH2-206ENST00000543555 KIAA0232Q92628 1395 aa17.54■□□□□ 0.4
MSH2-206ENST00000543555 IGSF1Q8N6C5 1336 aa17.54■□□□□ 0.4
MSH2-206ENST00000543555 CRB1P82279 1406 aa17.54■□□□□ 0.4
MSH2-206ENST00000543555 ATF3P18847 181 aa17.53■□□□□ 0.4
MSH2-206ENST00000543555 C19orf44Q9H6X5 657 aa17.53■□□□□ 0.4
MSH2-206ENST00000543555 DEKP35659 375 aaKnown RBP17.53■□□□□ 0.4
MSH2-206ENST00000543555 USP54Q70EL1 1684 aa17.53■□□□□ 0.4
MSH2-206ENST00000543555 MTHFSDQ2M296 383 aaKnown RBP17.53■□□□□ 0.4
MSH2-206ENST00000543555 KRT24Q2M2I5 525 aa17.53■□□□□ 0.4
MSH2-206ENST00000543555 TBC1D32Q96NH3 1257 aa17.53■□□□□ 0.4
MSH2-206ENST00000543555 EYA1Q99502 592 aa17.53■□□□□ 0.4
MSH2-206ENST00000543555 C1orf115Q9H7X2 142 aa17.52■□□□□ 0.4
MSH2-206ENST00000543555 KIF24Q5T7B8 1368 aa17.52■□□□□ 0.4
MSH2-206ENST00000543555 MARF1Q9Y4F3 1742 aaKnown RBP17.52■□□□□ 0.4
MSH2-206ENST00000543555 CHD1LQ86WJ1 897 aa17.51■□□□□ 0.39
MSH2-206ENST00000543555 GCC1Q96CN9 775 aa17.51■□□□□ 0.39
MSH2-206ENST00000543555 PHF8Q9UPP1 1060 aa17.51■□□□□ 0.39
MSH2-206ENST00000543555 LNPKQ9C0E8 428 aa17.5■□□□□ 0.39
MSH2-206ENST00000543555 RTF1Q92541 710 aaKnown RBP17.5■□□□□ 0.39
MSH2-206ENST00000543555 ADGRL3Q9HAR2 1447 aa17.49■□□□□ 0.39
MSH2-206ENST00000543555 HOXC9P31274 260 aa17.49■□□□□ 0.39
MSH2-206ENST00000543555 ABTB2Q8N961 1025 aa17.49■□□□□ 0.39
MSH2-206ENST00000543555 GAS2L2Q8NHY3 880 aa17.49■□□□□ 0.39
MSH2-206ENST00000543555 PSME1Q06323 249 aa17.49■□□□□ 0.39
MSH2-206ENST00000543555 SIRT2Q8IXJ6 389 aa17.49■□□□□ 0.39
MSH2-206ENST00000543555 RGS12O14924 1447 aa17.49■□□□□ 0.39
MSH2-206ENST00000543555 INTS3Q68E01 1043 aaKnown RBP17.48■□□□□ 0.39
MSH2-206ENST00000543555 BECN1Q14457 450 aa17.48■□□□□ 0.39
MSH2-206ENST00000543555 NWD1Q149M9 1564 aa17.47■□□□□ 0.39
MSH2-206ENST00000543555 ZBTB7CA1YPR0 619 aa17.46■□□□□ 0.39
MSH2-206ENST00000543555 ANKRD45Q5TZF3 282 aa17.46■□□□□ 0.39
MSH2-206ENST00000543555 PTPRCP08575 1304 aa17.46■□□□□ 0.39
MSH2-206ENST00000543555 MIS18AQ9NYP9 233 aa17.46■□□□□ 0.39
MSH2-206ENST00000543555 TSPYL4Q9UJ04 414 aa17.46■□□□□ 0.39
MSH2-206ENST00000543555 HTATSF1O43719 755 aaKnown RBP17.45■□□□□ 0.38
MSH2-206ENST00000543555 NFKBIBQ15653 356 aa17.45■□□□□ 0.38
MSH2-206ENST00000543555 RTL1A6NKG5 1358 aa17.44■□□□□ 0.38
MSH2-206ENST00000543555 MSH6P52701 1360 aa17.44■□□□□ 0.38
MSH2-206ENST00000543555 LRRC37A3O60309 1634 aa17.44■□□□□ 0.38
MSH2-206ENST00000543555 MFAP1P55081 439 aaKnown RBP17.44■□□□□ 0.38
MSH2-206ENST00000543555 C22orf23Q9BZE7 217 aa17.43■□□□□ 0.38
MSH2-206ENST00000543555 BMP2KLQ5H9B9 411 aa17.42■□□□□ 0.38
MSH2-206ENST00000543555 SLC4A2P04920 1241 aa17.42■□□□□ 0.38
MSH2-206ENST00000543555 CADPS2Q86UW7 1296 aa17.42■□□□□ 0.38
MSH2-206ENST00000543555 GNAT3A8MTJ3 354 aa17.42■□□□□ 0.38
MSH2-206ENST00000543555 ATP10DQ9P241 1426 aa17.41■□□□□ 0.38
MSH2-206ENST00000543555 SLAIN2Q9P270 581 aa17.41■□□□□ 0.38
MSH2-206ENST00000543555 LTV1Q96GA3 475 aaPredicted RBP17.41■□□□□ 0.38
MSH2-206ENST00000543555 PIP4K2BP78356 416 aa17.4■□□□□ 0.38
MSH2-206ENST00000543555 NFAT5O94916 1531 aa17.4■□□□□ 0.38
MSH2-206ENST00000543555 C1orf167Q5SNV9 1468 aa17.4■□□□□ 0.38
MSH2-206ENST00000543555 MAP3K5Q99683 1374 aa17.4■□□□□ 0.38
MSH2-206ENST00000543555 ANKRD44Q8N8A2 993 aa17.39■□□□□ 0.38
MSH2-206ENST00000543555 TBC1D2Q9BYX2 928 aa17.39■□□□□ 0.38
MSH2-206ENST00000543555 KRT28Q7Z3Y7 464 aa17.39■□□□□ 0.37
MSH2-206ENST00000543555 CABLES1Q8TDN4 633 aa17.39■□□□□ 0.37
MSH2-206ENST00000543555 DCTPP1Q9H773 170 aa17.39■□□□□ 0.37
MSH2-206ENST00000543555 LTN1O94822 1766 aa17.39■□□□□ 0.37
MSH2-206ENST00000543555 RPAP2Q8IXW5 612 aaPredicted RBP17.38■□□□□ 0.37
MSH2-206ENST00000543555 IP6K1Q92551 441 aa17.38■□□□□ 0.37
MSH2-206ENST00000543555 BRINP3Q76B58 766 aa17.38■□□□□ 0.37
MSH2-206ENST00000543555 G2E3Q7L622 706 aa17.37■□□□□ 0.37
MSH2-206ENST00000543555 CEP85Q6P2H3 762 aa17.37■□□□□ 0.37
MSH2-206ENST00000543555 IL17REQ8NFR9 667 aa17.37■□□□□ 0.37
MSH2-206ENST00000543555 MEIS3Q99687 375 aa17.37■□□□□ 0.37
MSH2-206ENST00000543555 MST1RQ04912 1400 aa17.37■□□□□ 0.37
MSH2-206ENST00000543555 USHBP1Q8N6Y0 703 aa17.36■□□□□ 0.37
MSH2-206ENST00000543555 KCNH5Q8NCM2 988 aa17.36■□□□□ 0.37
MSH2-206ENST00000543555 BABAM1Q9NWV8 329 aa17.36■□□□□ 0.37
MSH2-206ENST00000543555 STK31Q9BXU1 1019 aa17.35■□□□□ 0.37
MSH2-206ENST00000543555 XIRP1Q702N8 1843 aaKnown RBP17.35■□□□□ 0.37
MSH2-206ENST00000543555 RBM25P49756 843 aaKnown RBP17.34■□□□□ 0.37
MSH2-206ENST00000543555 CCT4P50991 539 aaKnown RBP17.34■□□□□ 0.37
MSH2-206ENST00000543555 SLKQ9H2G2 1235 aaPredicted RBP17.34■□□□□ 0.37
MSH2-206ENST00000543555 SOS1Q07889 1333 aaPredicted RBP17.34■□□□□ 0.37
MSH2-206ENST00000543555 TAF7Q15545 349 aaPredicted RBP17.34■□□□□ 0.37
MSH2-206ENST00000543555 ANTXR1Q9H6X2 564 aa17.34■□□□□ 0.37
MSH2-206ENST00000543555 FAM208AQ9UK61 1670 aaKnown RBP17.34■□□□□ 0.37
MSH2-206ENST00000543555 F6X3S4 739 aa17.34■□□□□ 0.37
MSH2-206ENST00000543555 FRAT2O75474 233 aaPredicted RBP17.34■□□□□ 0.37
MSH2-206ENST00000543555 CCDC30Q5VVM6 783 aa17.34■□□□□ 0.37
MSH2-206ENST00000543555 PHRF1Q9P1Y6 1649 aaKnown RBP17.33■□□□□ 0.37
MSH2-206ENST00000543555 SLC4A10Q6U841 1118 aa17.33■□□□□ 0.37
MSH2-206ENST00000543555 PLEKHM2Q8IWE5 1019 aa17.33■□□□□ 0.36
MSH2-206ENST00000543555 NBPF6Q5VWK0 638 aa17.32■□□□□ 0.36
MSH2-206ENST00000543555 NBPF4Q96M43 638 aa17.32■□□□□ 0.36
MSH2-206ENST00000543555 ZC3H6P61129 1189 aaKnown RBP17.31■□□□□ 0.36
MSH2-206ENST00000543555 TBC1D9Q6ZT07 1266 aa17.31■□□□□ 0.36
MSH2-206ENST00000543555 FLIIQ13045 1269 aa17.31■□□□□ 0.36
MSH2-206ENST00000543555 GSPT1P15170 499 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms